Array 1 225866-225299 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXUJ01000007.1 Acinetobacter sp. Ac_3412 contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 225865 28 100.0 32 ............................ GAGAGAATTAATTGATCTTGGTTATGCCACAC 225805 28 100.0 32 ............................ CAATGCAGAACGGTTGCGCTTAATGACGTTAA 225745 28 100.0 32 ............................ TTGGTCGTTTTGTGCAATGAATTTGGCGTCAT 225685 28 100.0 32 ............................ ATACTTTAAACTGATCAGCCGCACCAAGATAA 225625 28 100.0 32 ............................ GTTTGTCAAGCTCGTAGAAATTGACTTTAACC 225565 28 100.0 32 ............................ AACAAATATTTTTAAATGAATGATCTATCCCC 225505 28 100.0 32 ............................ ATGCTTTGTTTTCATTGATATAACAAATGAAT 225445 28 100.0 32 ............................ TGTCTATGGCAAGCGTTGGCTCATTGATAATG 225385 28 100.0 32 ............................ AAGAGATTCAGAATTTAGACAATCCAACTGCG 225325 27 85.7 0 ....................CA..-..T | ========== ====== ====== ====== ============================ ================================ ================== 10 28 98.6 32 GTTCATGACGGCATACGTCATTTAGAAA # Left flank : GTAAATGCGATTTGTCTTTGTAGATTACTTATTTCAATGGTATCAGCATCGACAATCGTAATCTTGCCCACACCTGCGCGTGCCAATAGCTCGGCACTGGTACAGCCAATTCCGCCTGCACCGATAATCAGTACATTGGCGAGTTTTAATTTTTCTTGTGCTTCGATATCCCAACCATCTAATAAAATCTGACGACTATAGAGATGCATTTCCTCATTGCTTAGCTCAAATTCGTTTTCTAAATGGTCTGACACGTGACTTGCTTCTTTATCATCAAGGGTAATGCTGATTTTAAGTCGATGTAGGATTTGAGGAAAGTAATAAATTGGAACGAACATTGTTTTCTTTTGACAAAAAGCTATTTTTACCCCAATATTTTTCTTACTCTTTAACAGCTTAATAAAATCAATAAGTTACCATATCAGTTAAAAACTTTGGGTATTTCTGCCTTTTTGGATATAACTTGATGTTTTAGCTTATATTATTTTCATTATTTTATA # Right flank : TAATGTTCTAACTGGAGATAAGATTTAAACTGAAAACCACGATGTATCAAAGCGTTTAAAGAAATAGGAAATCGAATTCTGGCAGTTTGTAATACGTGAAGAACCCATGTTTTTTCAGCTAAAAATTCAAATAAGATTTTATCATCACATATCCTAGGGCCAGTAAAGATATCAGTCTGATAAGCCAGCCCTATCCATAATGACTCCAACAATATATTTTTATCCAGATCGACTAAGGCCAAAGTTAAAGTTTCTTCAAAGATACAATCATGGCTAAGGAAAAGAAGATAGCAGTGAGAATATACACAAACCACACCTTCTAACACTTTACCCTCAACCATAACCCCTGTGTTTTCCCCCTTAATCATCACTTCAGACTGAGGCAAACACTTATCTGTCATATCTTGGATCAATGCTAAACCAATATAATCAGCCACATACATATTCAACTTTGCCTAATAAAATGATTACCGATTATATTTCCATCTATTACTTTGACT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGACGGCATACGTCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCATGACGGCATACGTCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.50,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 67552-67102 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXUJ01000008.1 Acinetobacter sp. Ac_3412 contig_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 67551 30 100.0 30 .............................. CGCCACCAATAAGGCCCTCTTCGCAGTAAA 67491 30 93.3 30 ............................GG CGCAGCACCGAGCCTTAACATTTCCAATTT 67431 30 96.7 30 ............................G. GATAGCAAACACATAAAACGCGATAAGAGC 67371 30 93.3 30 ............................AA TCAAAGTATGGGAATGTATATTCACCTATA 67311 30 100.0 30 .............................. CGGATTTGACTCAATCAGATCTAGGACAGA 67251 30 100.0 30 .............................. AATGTCAGAGAGAAAATTAAATTGGCATTA 67191 30 93.3 30 ............................GC ATAAATTTGATGGGCAATCAATCGAAGATC 67131 30 83.3 0 ........................TTTG.G | ========== ====== ====== ====== ============================== ============================== ================== 8 30 95.0 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGGATGTGGTTGGAACGGTTTGTGGACTATGTCCATTTCACTCAACCACGTGAAGTACCTCAAGCTAAAATTATGGGTTACGCTCATTATTTTCGAGTTAATCCAAAAATGAGTTTGGAGCAACGTATTGTTCATCAAGCTCAGCGCCATAATATTTCTTTAGATCAAGCGAGACAGCACTTTAAGCAATATATTGATCAGCCTGTAGTTGAGCCTTATGTGAGTTTGAAAAGCCTAAGTGCAAAACGAGAGGAAAATATAGATCGACCGTATCGCTTATATATTGGTAAATCTGTTGCTGATGAGGCAAAAGATGGAACATTTGGAACTTATGGGTTAAGTCGTTTCTCAACCGTACCAGAGTTTTAACCCAATATTTTTTGACTCTTTAACAGCTTAATAAAATCAATGAGTTACAGTAAGTGGTTTTTTGATTGGGTAAAATGCCTAAATCTATATTAACTACTTGTTGTAACTTATATTTCTACTATAATTTTATA # Right flank : AGGCAGAGAGTAGATAGGTTAATTAATAAGAACTTACACACTTACTCTCTTTAATTTTTAACCAAGAAAATATACCCTGAAGCTAATGTAATTATAGTGAATAGTGAAACGTTCATGCGCGGTCTATACCTCATTACCAACGATGATCCAATCCAATTATTATTAGAAAAACTAGATGTGGCTTTAGCAACAGGACAGGTTGCGATTCTGCAATACCGTCGTAAGAAAGTCGAAAAAGCAGATCAGCCAAGTGAAGTCGAGCAGATCAAAGCACTTTGTGAAAAGCATCAAGTCCCGTTTGTGATTAATGATGATTTAGCTTTGGCTGAACAATTTGGTTTAGGTGTGCATCTTGGACAATCCGATGGTGAAATTAGTGATGCGGCCGCACGTTTACCACAAGGTGTAATTATTGGTCGAACTTGCTTAAACTCATTAGAGTTGGCGGAAAAGGCGATTGCTGATGGTGCAACTTATGTGGCCTTTGGTGCGGTTTATGC # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //