Array 1 27489-29156 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADQTT010000005.1 Corynebacterium diphtheriae bv. mitis strain 02-19 NODE_5_length_150362_cov_46.807841, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 27489 28 75.0 25 TCA..CA.................TC.. GGCGGTCCAGTTCTCAAAGTCCCTG A [27505] Deletion [27542] 27543 28 85.7 33 ..........C...GAC........... CAATACATGAGGATTGACAGTGCTGATTATGAC 27604 28 96.4 33 ..........C................. ATACTGGGTGTGTCTCGTGGATCCGTTAACAAC 27665 28 96.4 33 ..........C................. AAGGGTAGCGTGCAGTCACGACAAAACCAAGGC 27726 28 96.4 33 ..........C................. GCTGGGGGAGATCAAAACCGCAGGGACGAACGG 27787 28 96.4 33 ..........C................. CCGGCGTCGGCTTTTCCAGCTCTGGCCTTGAGG 27848 28 96.4 33 ..........C................. CATGATGCCTAGCAACCGATCTTGATTAGTCTG 27909 28 100.0 33 ............................ CACAAGAAGAGCTAAAAAGGGCAATCCGGCAGG 27970 28 100.0 33 ............................ CACCCCACAAAATTCGGCACCGCTATGCCACTG 28031 28 100.0 33 ............................ CGTACATGTGGACAGGTCAAGATGACCAAATGG 28092 28 100.0 33 ............................ GCCCGCGTTCGAGTGATCGCGGAAAAGCTTCAC 28153 28 100.0 33 ............................ ATGTGGTGGGATGCGGTATGAACTGTTTCTCGG 28214 28 100.0 33 ............................ GGAACAACAACGAGACTTTGATACAACCCTTGC 28275 28 100.0 33 ............................ GACCGCTATAACGACCTCATGGCAGACCGGTAC 28336 28 100.0 33 ............................ TAGATTTTGCACGCCTATTGGAACATGTAATCA 28397 28 100.0 33 ............................ GATGAGGCGTATGAGCTGACCGCCACCAACGAG 28458 28 100.0 33 ............................ GGGTGGTCGTTCCCTCATGCACCGTTTACGGAC 28519 28 100.0 33 ............................ TGGATGGTCTTACTATTGCCGGTGTGCAGGGTC 28580 28 100.0 33 ............................ GTGTTGGGCGAAGAGGATGGTTTTTTGGGTTAG 28641 28 100.0 33 ............................ CTGAATCCACCGTGAAGCGCGCCGTAAAAGAGC 28702 28 100.0 33 ............................ TGCGGCGCGATCACATCTGTCACATCGTGTTCC 28763 28 100.0 33 ............................ GCGACGCCGGCTCAACGTGGTTTCACAATCTTG 28824 28 100.0 33 ............................ CCCAGTGGGATAAGTCCATGGGTGGCCGTCCCG 28885 28 100.0 33 ............................ TTATCGCCGTGGAACGTAACGGCCTGCGGAAAG 28946 28 100.0 33 ............................ CCCAGTGGGATAAGTCCATGGGTGGCCGTCCCG 29007 28 100.0 33 ............................ GTCCTGATGTTGATCCCGACGATCTCGACGCGG 29068 28 100.0 33 ............................ TGACCTGCGCGGCGGTCGCATACCCTACCGGCG 29129 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 28 28 98.0 33 GGCTCATCCCTGCTAGTGCGGGGAAAAC # Left flank : TACATCAAAAAGCTCGAAGCGATCAGCGTAACGATCCAAATAGTCTAGGACGACCTGATCTTTCCCTTTTCGAGCAAGACGACGTCTCATCTTGTTGAACCATTCAAGAAAATCAAAAGGTTCCACGTCCATGTCGATATCCATGGAATGGGCACGCCAGAAAATAGCCAGCAAAAGCCGCATCACAGCATAGTCTTGAGCCGGGGACTCCCCCTGAATATAGGCAACCTGCACCTCCCCCGCGAAAATATCTCGTATTCCAACTGAAATCTGGTTACCTTGAGTATCAAGAGCCAGAATCCAGCGGATCTCCAGTAACGAAGCCATCACCAACTCCTTCCTGATTGTTTTAAAACTCCCAACTTAGGAAGCACTTTTCCACAGAATACACTCTATAGATATTAAAAGTTAGTTTTTTCAAAATTTTTTAGTAGAGCCATCATTTACTGATTTCTCTGAATGAAAAACACAGATTCCAAAACCCGTTCTTCAACAAAGAT # Right flank : CACTTATCAAGCTGCACGTTTAGAGCCAGTTAGAGCTTATTACATATAACTTTGTTTCAGCAATTTTTCTGCTTCATCTTTATTTCTACTCTTTTAGGATCAGCCATTCACCCAAATTTGCTTAGTCCTTTCTTCTAGCCATAGGCTGGCATTGTTCCCTGCGATCAGGGATGAGCCTTTTTAATATCTCTACAAGATTTACATAGGCATACTTCCCCGCACCAGCGGGGTTTCCTTTTATGCGTCTTCCTTTGGGCAGACTTCCACCTCTAATCCACGTTCATTGGTATAACGCACTAGGAATCGACCTACACGAGCCTCTCCTCTTTCGTCGAAAAGCAACGCAACTTGGCCTTTAATCAAACCGGATCGTTGCCATTCTGGTGGTGTTTGTGCTTCGAGCGAATCAATAACGGCATTAAAATCCGAATCTCTACGTGTCATTCGGGTTGGCAGGCGCACTGTGTTTCCAGCCAATGCCTCAGTTTCTTTCCAAGTAA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCATCCCTGCTAGTGCGGGGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.50,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA //