Array 1 533291-527725 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFSJ01000001.1 Acinetobacter calcoaceticus strain NCTC12983, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================================== ================== 533290 28 100.0 32 ............................ TTGTTAAAAAGATCGCTAATGAGGTTGTAGAC 533230 28 100.0 32 ............................ TCCGCCTCCTCGTTCCTCGTCGTTGTCGTCGT 533170 28 100.0 32 ............................ GCAAGCGACAATGCAAGTTTGGGCATTCGTAA 533110 28 100.0 32 ............................ AGCACTCGGAGAAGCTTCAGCAATAGCAATTT 533050 28 100.0 32 ............................ AATAAAAAAGGCGGATGCGGTGCGTACGGTCG 532990 28 100.0 32 ............................ ATTCAGGATGGTTCCAGAAACCGTATTGATTA 532930 28 100.0 32 ............................ TCTACGACGGGCATCGCGTTCTTCTTGTTGGA 532870 28 100.0 32 ............................ AATACCAAGAGATGTAAACGCTATTAGAACTA 532810 28 100.0 32 ............................ AAAGTAAAAGCTTGGAGCCAGTCAATGAAATT 532750 28 100.0 32 ............................ TTGTGAAGCAGACATTACATTTGAAATGGTGA 532690 28 100.0 32 ............................ CCACTCCACCATCGTCATTTCAATATGGAAAA 532630 28 100.0 32 ............................ CAGATCCCGCCGACTCCAGCCCTCACACCTGA 532570 28 96.4 32 ...............A............ AGAAACACGACTTTGAAATATGTAAGATCTAT 532510 28 100.0 32 ............................ AATCGCCCAAGGCTCTCCATTCACAATAGGAT 532450 28 100.0 32 ............................ AATTCACAGCTATGGGTGTTCACTCAGTAGTA 532390 28 100.0 32 ............................ ATGTATTAAAGATAAGGCTTCAATTGCCAGAT 532330 28 100.0 32 ............................ ATCATTATCTAAAGAAGATTTAATTTTTTCTT 532270 28 100.0 32 ............................ ATTCACGTGAACATGCAAAGTCTGTTGCTGAT 532210 28 100.0 32 ............................ TTCAAGATGTTTACCCGGCAGATGATGAACCG 532150 28 100.0 32 ............................ ACAGCTTTATTCGCAGCTTTGAGACCTGCATC 532090 28 89.3 32 ...CG.......A............... AACAGTACAAATATTTCAGCGTTGCAGGAAGC 532030 28 82.1 32 ...G......ATGT.............. ATGAACCTTTTGCTCATTTCAGTATAGACACT 531970 28 82.1 32 A..CG.......A...G........... AAACTAGAAACCAATATTTATTTATGTCTGAT 531910 28 78.6 32 T..CG.....A.AT.............. TTTAAATCAACAGCAACTTTTGCAACATTCCC 531850 28 89.3 32 ...G........GT.............. ATTTCACCGCCGCTTGTCTGCATGAAGTCACC 531790 28 92.9 32 A..G........................ ATAAAATATTTGTTCCGTAGAGCGCTTCTTTC 531730 28 92.9 32 ...CG....................... TGCTCAAGATTATGTTGATCGAACTCTCGACA 531670 28 96.4 32 ...G........................ TTACGGCGTTTTATCTTGTTCCATTTCTTCTC 531610 28 96.4 32 ...T........................ CTTCATTAAAGAAGTTCATATTTTTTAATTTT 531550 28 92.9 32 ...T........A............... CTACTCCTTGATTACAAAATCCCTTAAATCGT 531490 28 96.4 32 ...G........................ ATGTCGGTTTTCAGCAACTTTTAAAGCCTAAT 531430 28 100.0 32 ............................ ATCCCCGTTTGCATTGTGTCATACAGCCGTGA 531370 28 92.9 32 ...G........T............... TCATAAAAGAAACGGCCATTTTCTGAATAAGT 531310 28 92.9 32 ...G........T............... CAAAAGCGTTCACGGTCTTGTTGTCTTTCTGC 531250 28 85.7 32 A..CA.......T............... ATTTCACCACCGCCTGTCTGCATAAAGTCACC 531190 28 85.7 32 T..G........T......G........ GGTGTTTGTGTGACACATACAGAAGTTGCCGC 531130 28 85.7 32 ...CA.T......T.............. ATTAATTGATGCGTTCTGGCGCGCAATGATAG 531070 28 92.9 32 ...T.........T.............. TATGTATTGGTTACGATAGGCAGTACGAACTT 531010 28 89.3 32 ...CG......T................ TTGTGCTTAGATCCTTAAAAATGGCCTTTGAT 530950 28 89.3 32 ...G........AT.............. GCGATATGTTTAGCAAAATGCCTGATTGGATG 530890 28 92.9 32 ...CG....................... CCAACCACACTTTGATACTCAACGCTAATCTC 530830 28 92.9 32 ...CG....................... CTAATAAGCCAGTCATTGCTGTGGCTTGTTCA 530770 28 92.9 32 ...CG....................... CTACACTCCTGAGCGTTTTGCAGCAGCCATCT 530710 28 92.9 32 ...CG....................... CATGCAAATACGATAATTTCAACTTCTTCAGC 530650 28 92.9 32 ...CG....................... AATTCCATGAATCGTGCTTTAAGTTCTGCGGT 530590 28 92.9 32 ...CG....................... AACTAACAATTTGTTGCTATTGGGATCATTCG 530530 28 92.9 32 ...CG....................... ACCATCAAGCAGCCAAGTACCTTCTTTGGGAA 530470 28 92.9 32 ...CG....................... GTGAAGATGGTAAAAAATACCTTTCTGATAAC 530410 28 96.4 32 ...G........................ CACAAGCTTTAAATATGATTGATGCGTATGGT 530350 28 92.9 32 ..CG........................ TTCGTCAAGGGCTTTGGCGCGGCGTCTTAATA 530290 28 85.7 32 ...CG.......GT.............. AATAAAAAACTAGAAGAGCAAGCTGCTGTTGC 530230 28 96.4 32 ...G........................ AACCATTTTGTTTTGTTGAACGTGAGCTTTGA 530170 28 96.4 32 ...T........................ GTGAGGATGCCAAAACTCATAAAGCACATTGT 530110 28 92.9 32 ...CG....................... ATGACGATAGAAAACTGCCGCTGCATTTCACG 530050 28 96.4 32 ...G........................ AGCAAGGCGATAAGTTGAGGTGATGCTTGTCT 529990 28 85.7 32 ...GA.......GT.............. AGAAGATATATACGAAACTGGCGAAGCCTTAG 529930 28 89.3 32 ...T........AT.............. TTTAGCGATCCAGTAGTGATTAACACTCGGTG 529870 28 92.9 32 ............AT.............. ACGTTAGCTATCGATATAGACCGAGAAAGCAA 529810 28 92.9 32 ............GT.............. AGTCTATGCAGTGCCATTCTTTCCTGAAAATG 529750 28 96.4 32 ...G........................ AGTACGGGCAATATCAAACTTCGTGGTGGACA 529690 28 92.9 32 ....T........T.............. CCTACGGGCAACATCCCTAACACACCCACCTC 529630 28 82.1 31 A.ACG.......A............... AAGTTGGTTGAACCATATTCTGATGGGGTAA G [529604] 529570 28 85.7 32 ...CA......TT............... TATCTTTCATTAACTTTGCATAAGCATTTAAA 529510 28 89.3 32 ...G........AT.............. CTGATCAAGTGCAATTTCATCCTAATGTAATT 529450 27 82.1 32 ...CG.......-T..........T... ATCTTAATGCCAATAGCTTTAGCTTCCGCGCT 529391 28 85.7 32 ...CG.......AT.............. TACATACTTGCTGTCACCTTTTAGTACTTCAG 529331 28 89.3 32 ...G........AT.............. TCCTTTTCTCAGGTTGCACAGCTCATACTGTT 529271 28 89.3 32 ...G........GT.............. AAAGTCATCAAATGTAGTAATTAAATGTGAAC 529211 28 92.9 32 A..G........................ ATTCAGTTTTTTGCACAAACAATTGGTATGCA 529151 28 96.4 32 ...G........................ GTTATGAAATGCCTGAGTTACAGGAACATCAC 529091 28 92.9 32 ...G........A............... AATCCTTTTGACTGCTGATATGTACGAGGTAC 529031 28 89.3 31 ...G........AT.............. AAGTTGGTTGAACCATATTCTGATGAGGTAA G [529005] 528971 28 82.1 32 ...CG......TT..............G AAAAACACAGCAAATTTGCGCAATGGTTATTT 528911 28 92.9 32 ............AT.............. TCTATTGCTGTTCCTGGTAGTAGAATATCTGT 528851 28 96.4 32 ...G........................ TCTTTAGTGGTCGGATCGATGACACGCATATA 528791 28 85.7 32 ...G.......TGT.............. CAAATGACATCTAGAACATCTAACAGATCTTC 528731 28 96.4 32 ...T........................ TGGACAATCTGAGCCTTCACCGCTTCCAACCC 528671 28 89.3 32 ...G........GT.............. AGTACATGCAACGACAACAATCGTTAAGCAAA 528611 28 92.9 32 ...G........T............... ATGCATCGGAATCACCAAATACATGTGTCTGA 528551 28 92.9 31 ...CG....................... TGCTCGGATCTAATCCTATTCCGCTCATAAG C [528526] 528491 28 85.7 32 A...T.......GT.............. TTTGATATTTTCAGAATATTAATTAGTGGGAT 528431 28 89.3 51 ...GT........T.............. TGCATGAACATTATCAAGGACTTCCATTAACAATTGATAAGCCTTTGTTCA 528352 28 92.9 32 ...G.....T.................. TCAATCAGTAACGTCTTTTTTGGTGTGACATC 528292 28 85.7 32 ...G.......TGT.............. AGCTAATTTAATGCAGCCATGTGAGCGATTTA 528232 28 92.9 32 ............AT.............. TAACGGGGTTAGAGCCAAAATCTGGCCATACT 528172 28 92.9 32 T..G........................ AATGAGGTTGTGTTGCTACTGACACCTGAAGG 528112 28 92.9 32 ...CG....................... TATCTGCAATGGAAGGTACTTCTTCTGCCAGC 528052 28 96.4 32 ...G........................ ACGTCTTCTAATGGTGGACTCTAGTCCAATAT 527992 28 85.7 32 A..GG.......T............... TGCCGTGGCGGTCCCCCTTCTGTTTCTTGTTC 527932 28 89.3 32 ...T........AT.............. TCGCAATAAAAAACCACTCGAGAGTGGCTTAA 527872 28 89.3 32 A...T.......A............... CACAAGACATGGGCGCTTAGCTCTTTGTGGTA 527812 28 89.3 32 ...G........A.......C....... ATATTGCGCAAAGTTCCATTTATACGCGCTTC 527752 28 75.0 0 ...CG.......T..A.A......AT.. | ========== ====== ====== ====== ============================ =================================================== ================== 93 28 92.6 32 GTTACTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACATTATACAAGCAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGAAAAAACTCTCACGACACTATTGCTGATATAGCCAACAGCTACCTCGATCATGGAAATTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTGATGCCACTCGCCTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATATATTTAACCCAAGTACCTCATAGCGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTGAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGTTTTTCACGAATTTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCATTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCTTGTGACCCGACGAACAGGGTACAAGTTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTACGGTCGGGTTCCTAAACCACAAGTATTCTAGGAAGCGGACAAACTGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTAAAATATGCAAATTTGATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCAGCGTCGAAGCCAATAACATCCCCATGAATGTATGAGCATCATAGCATAACTAAAATAAAATACTGTGCATTTTATCAACAGTCCGCTACTGATGAACATATTTACA # Questionable array : NO Score: 5.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.63, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACTCATCGCCCAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.87%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [45-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //