Array 1 1506900-1503714 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJAVF010000002.1 Methylobacillus methanolivorans strain VKM B-3037 platanus_K_25_97_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================== ================== 1506899 37 100.0 30 ..................................... TGCCCGGATCATCGCTTTCAAGCCTGCCAC 1506832 37 100.0 30 ..................................... TACCAGAATCACTTTCCCTGACGCCGATCA 1506765 37 100.0 30 ..................................... TTAGGCACAACTCATATCATCACCTCGTCA 1506698 37 100.0 30 ..................................... TGGACACGATCTCGGCATGCGAGGACGTGC 1506631 37 100.0 30 ..................................... GATGTGTACGACGTTACTGGTATCAGCTCC 1506564 37 100.0 30 ..................................... TCAATGATCTATCCTTGTTCGCTGGCCTAA 1506497 37 100.0 30 ..................................... TCTGCCAGTTGACGCACTGCCCAACGCCAG 1506430 37 100.0 30 ..................................... TACCGCTACGGCTAGGTGAGCTAGTGTCGA 1506363 37 100.0 30 ..................................... CAACGTAGTCATGGGGAAAGCCCGTGGCGT 1506296 37 100.0 30 ..................................... TAGCCATGCAAGCCGCTCAAGCGCTTCAAA 1506229 37 100.0 30 ..................................... TAGTGCTCAGATAGCCGAAGGCGTAGCTAT 1506162 37 100.0 30 ..................................... TCTAACCAATACATACAAGGCAATTTCAAA 1506095 37 100.0 30 ..................................... GTAAGGGCTTGTCCAAATAGCGCAATACAG 1506028 37 100.0 30 ..................................... TATAACACAATGCGTAGAATTTATGGTCGT 1505961 37 100.0 30 ..................................... TGACCACAATGTCTACTACTGGCCCTGCAA 1505894 37 100.0 30 ..................................... CACGCACTCTACCTATGGCGAATACATTGA 1505827 37 100.0 30 ..................................... TATATTTTTAGCCATAAGAGCAGAATTAAC 1505760 37 100.0 30 ..................................... CTTTAAGCCTCTCCAGGCTTTCAGGCAGGA 1505693 37 100.0 30 ..................................... TAATTCTGACTTCGTTAACTGCGTACCTAC 1505626 37 100.0 30 ..................................... GAGTCCTGGCGGAAGGCACTAAGGGGCGAG 1505559 37 100.0 30 ..................................... CGGAACCCTTGACGGCTGGCATGCTGCCCA 1505492 37 100.0 30 ..................................... TCAAAAATAATGTTATTGTCACTCCACTGT 1505425 37 100.0 30 ..................................... TATGAAAGACTTATTAAGAGTGGGAAGCGA 1505358 37 100.0 30 ..................................... CTTCGTTCTTAGTTCCAGCTGGGATAGAAA 1505291 37 100.0 30 ..................................... TCAGTTTGATGGCTCCGTTCTGACTATGGG 1505224 37 100.0 30 ..................................... GGTACCCTTGACGGCTGGCATGCTGCCCAA 1505157 37 100.0 30 ..................................... TGATACGACCACATCAAACTGAGACCCCAT 1505090 37 100.0 30 ..................................... AGCAGTTTCATTTACGCCACGTTCAACGCT 1505023 37 100.0 30 ..................................... TTCAAAACCGGTACAGCGTCGTTCCTCCGC 1504956 37 100.0 30 ..................................... TCCTACCGTCATACGGCAAAATCCCCGCTT 1504889 37 100.0 30 ..................................... GGATTTCCTCCGGGGCATCACCCAGCACCC 1504822 37 100.0 30 ..................................... GTTGGTCACGCCATGCCGCCATATGGCTGG 1504755 37 100.0 30 ..................................... ACTGCTCACGCAGTCTCAGGTAGTTGCTGT 1504688 37 100.0 30 ..................................... AACAGGCGAGGTTTGCACCACGTCTGGCTG 1504621 37 100.0 30 ..................................... CAAGAATCACACCACTTTGCAGAGGTATAA 1504554 37 100.0 30 ..................................... CTCGCTAAACTCATCCCTGGCAACTCGGTG 1504487 37 100.0 30 ..................................... TGGTTAGCCTCGATAACCGCTTCCGAGGGT 1504420 37 100.0 30 ..................................... CATCTGTGGCAGATTTAGATGTCTCAGCTC 1504353 37 100.0 30 ..................................... CATGCCCGTAACCTCATGTTACCCGGTTGA 1504286 37 100.0 30 ..................................... ATGGGCAGACAGCTCCTTACTCAGCGCATC 1504219 37 100.0 30 ..................................... CTCAAGCGTCAGCCAGTAACGTGGTAGCAA 1504152 37 100.0 30 ..................................... CTCCTATCCCGCATAGCGGAGTTGGAGAAC 1504085 37 100.0 30 ..................................... TGGCAAGGTAACATGGTTTGCTCCGCACGC 1504018 37 100.0 30 ..................................... TAGTGTGGTTGGCATAGCCAAAACCTCCGC 1503951 37 100.0 30 ..................................... TACCCGGATCGTCTCGCGACCCCGGCGCTG 1503884 37 100.0 30 ..................................... ACTCAGCGCATCAATGCGGGATTGCTTTGA 1503817 37 100.0 30 ..................................... GAAGGTGAACGGCGTGGAAAGCACCGCGCT 1503750 37 89.2 0 ..........................A..C.A..C.. | ========== ====== ====== ====== ===================================== ============================== ================== 48 37 99.8 30 GAGTTTATCAGGCATTCCGATGGTGGGGTATCGGAAC # Left flank : GGTGCGGGGTATCGATTGCCTGCTGCAATTAACGAGAGTGTTGCTAGCTTTGTAAGAGTCTTAGATGGTCGTGGGGAATACTTACAATTGCCGCAAGATGCACTGCTACAAAGAAATGAAGAATATCCATGGGAATAAATGGGTGGCGCGTGATGTGGGTGATATGCGTATATGACTGTCCAATGATTGATTCTGAGGCTCGGCATGACTACAGCGTGTTTCGACGCAGTCTTTTGCAAGAAAATTTTGTGCAATTGCAAAATTCGCTATATGTGCATCATTTTCCGACGATTGCGGTAGGTGAGGCGACGATAGTGAGGCTCCGCCCCCTTATTCCTAAGGATGCACAAGTGGCATTTTTTATTGTTACAGACAAACAATACGGTATGACTAAAGAGTTTTTTGGTACCAAACCCACAAAGAAAAAGCCCAACATGCCTGAGCAAGTTGAGCTTTTTTAATAGTTACTTCTTTATAAATTAACTAGTTGCGAACAACTA # Right flank : CTTAACTCCACCAAAGACTATTTAGACTTGACCAGAGTAAGAGGTGGACAAAGTCACTGTTGCTCGTCTTGGGCTCCCATGCTCTAGATAGGCGTGGCGATGGTCACTACAGTATCCAGCTATACGCAACCCCAAACGTATCTTGATGCATTTTCAGGTTCACGTCTCCGCCGCCAAATAATGTGGGGATGGAGTTGTTGCCTTTGACGGTATTTTCGAAGGCGTGGGCATAGCTAAATGAGAGTTCGTTGTTGTTGGCGAGTTTCCAGGTGGCGCCTAGGGTGATGTGGTCTTGTACGACGGCGGGGGCCAGGATGTTGAAGAGGGTTTCGCTTCGCGGGATGGGTTGGGTGGTGTGGTTGTAGCCGGCCCGTAGGGTGAGTTGGTCGTTGACGGCAAAGACGGTGCCGAGTTTGTATACAGTGACGTCGCGCCAGCCGAATCCTGGGCCTTGATCTGAGCCAAGGGCTTGTCCGGAGAGGAGTCTGTTCAAGGAGTTG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTTATCAGGCATTCCGATGGTGGGGTATCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.10,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //