Array 1 25289-23668 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJGUF010000200.1 Limosilactobacillus reuteri strain MR6 scaffold200, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 25288 36 100.0 30 .................................... ATGGTAATACCACTTTTTGCCATCAACTGT 25222 36 100.0 30 .................................... GGTCGGGGTATAATGTTTCTTTATCTTCAA 25156 36 100.0 30 .................................... AGCGCTTAATTGATAGGGGGAAGAATTATG 25090 36 100.0 30 .................................... AAGTAGTCTTCTAAATCAGGTACAACTACA 25024 36 100.0 30 .................................... GGGTTAGTACTGCTTGAATACAACAGCCAG 24958 36 100.0 30 .................................... TTGAGCTTAGCATTTTGGCGGCGTAAATAT 24892 36 100.0 30 .................................... AAGTTCATTTTATTCTTCAAGGCGCTATCA 24826 36 100.0 30 .................................... TGAACGATTTGTTGAAGAACTTAAACAGCA 24760 36 100.0 30 .................................... AAATAATAAACACCGATAACATCTGCACCA 24694 36 100.0 30 .................................... GACGAATTTACAGACAATTAAAACAGACGT 24628 36 100.0 30 .................................... AAGAACAACCGAAGGGCGTTAGTTCTTTAC 24562 36 100.0 30 .................................... CCATACAAGGTTGATGCAGATAGAAACTTG 24496 36 100.0 31 .................................... AATGATTGTCAAACCGACGATCTAATCCGGT 24429 36 100.0 30 .................................... GAATCTATTACCCGTGACTTTGCCAACTTC 24363 36 100.0 30 .................................... TTTTGTTTGGCGTAACTGTAATGGTCATTT 24297 36 100.0 30 .................................... TTTATATTCCATTTACTTGCTACATTATCA 24231 36 100.0 30 .................................... TGGTGATATGCGTACTCATGAATGCTGGCA 24165 36 100.0 30 .................................... TAGATTGGCGCTACCAAGCCTACGAAATCA 24099 36 100.0 30 .................................... ACGATACAAGCGAAGAATTATATCATGAGC 24033 36 100.0 30 .................................... TTTTCAAGGTGGGAAATCATGGGTGGAAAG 23967 36 100.0 30 .................................... CTAACTAACTCGCTCAAAGCAACAGTTGAG 23901 36 100.0 30 .................................... TTGGTAATTCAATGGCATACGGATGTTACT 23835 36 100.0 30 .................................... TCAAAAGCTTCGTCGGTAGCCTTCTCATCG 23769 36 100.0 30 .................................... AAAGCAATCAATGAAAACAGAATACAATAT 23703 36 91.7 0 ........................G...A......T | ========== ====== ====== ====== ==================================== =============================== ================== 25 36 99.7 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTACTAGATGCTGAAGCACGTCGACTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGCTATGATGGTGATATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGTCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAGATACTATGGAAATGCGAATTTTTATTATATTGACAGGGATTTCGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : AAATATTAGTCGAACTCACGGCTGAGAAAAATCTTAAATATGCTTCAAATTTCCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAATTAGTGTATAATATTTACTAAACCCATTACTAAAAGAGGTGAAAAATAATGGCAACAATTAAAGAAATTGCGAAAAAGTCAGGGTACTCACCAGCAACGGTTTCGCGCCTTTTGAATAATGACCAAAATTTATCGATCAGTCCAAGCACCCGCAACAAGATCATGACGGTGGCTACCGAGCTTGGCTATTGGAACAGCCACAAGAAAAACTCTCAGCAGCAACCAATTCGTCCTAATCTTGCTTTATTGTATCGGGTAAGCGGTAAAGAACAACTGCAAGATGAATATTTTACGTTTTTGCGAAATGCAATTATTAAAGAAGTCGATGAGGTGGGAGCACAGGTTGAGATCTTTAGTAATATCAAAGATTTAATTGCGACGGCTGATTCGTTCCAAGGATTTATTGG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //