Array 1 58-391 **** Predicted by CRISPRDetect 2.4 *** >NZ_JULV01000076.1 Corynebacterium striatum strain 963_CAUR 755_419_9188, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 58 29 100.0 32 ............................. CCACCAGTAGCCAGATTCTTTAGAAATAGCGA 119 29 96.6 32 ............................G TCTCCACCCCGGAACTGGACGAGGTACGGGGC 180 29 100.0 32 ............................. GGGAGGTCATCAACAAACACTTATCCCTCTAG 241 29 96.6 32 ............................C CATTTTGCGCCCTCGGTCACGTATGGAAGCAA 302 29 100.0 32 ............................. ACGCGGTGCAATACAAAACGCCTGACGGATGG 363 29 96.6 0 ............................C | ========== ====== ====== ====== ============================= ================================ ================== 6 29 98.3 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCT # Left flank : CGGAAACAGGCAGTACCACGGAGCCGTAACCGCGGTACCAACTACCCGCGCTCAGCAG # Right flank : CACGGAGCCAATCTGCGGGCGCGGTGTC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [35.0-13.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 183-33 **** Predicted by CRISPRDetect 2.4 *** >NZ_JULV01000086.1 Corynebacterium striatum strain 963_CAUR 832_54756_1406255, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 182 28 100.0 33 ............................ CGGAATTTGGGTTCTTAACCTTTGGGTTGAGGT 121 28 100.0 33 ............................ GGGCACTCCTAGTCAGATTCGTGCGCTAATTGA 60 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 3 28 100.0 34 GTCCGCCCCGCGTAAGCGGGGATGAGCC # Left flank : GTGGACAATAGCGCCGAGTCAATCGATGTAGAGCTGCTTTTGTGGAACGAACTTGAAAATATTGCGGCTGGTACTAATTGGTCAGACTTTGATCGGAGTTCTCCATGATGGTGCTCGTCGTTACTGCATGTCCCGCCGGCCTGCGCGGTGACCTTACTAAGTGGTTACTTGAGATTTCACCTGGGGTGTTTGTGGGTCGTCCATCAGGGCGCATTCGTGATCTGTTGTGGGAACGTTGCGTAAGTTTGTGCAAAGATGGCCGCGCTATTTTGGTTTTTAGCTCCGATAATGAGCAGGGGTTGGATTTTCGCGTTCATCGCCATGAGTGGGAGCCTGTGGATTTTGATGGTGTCACCCTCATGCGAAGAACCACTGCGCCATCAAAAGCTCAACGCCGTACCGGCTGGAGTGCTGCCCGAAATGCTCGCCGACACTGACCGTTACACCATAAGTCGGATCTGCTAGCCTCGTTTTTGGCTCTTCCACGCTGGTCAGTAAGT # Right flank : CCGGCGTTGAGCTGACCGCAGCGCAGCGTGCAC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCGCCCCGCGCAAGCGGGGGTGAGCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [15.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 32-853 **** Predicted by CRISPRDetect 2.4 *** >NZ_JULV01000143.1 Corynebacterium striatum strain 963_CAUR 1099_74387_1892514_897_,402+,514+, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 32 29 100.0 32 ............................. GCCTCATCCGTAGCGTCCGCACGCTTACCCTG 93 29 100.0 32 ............................. CGCACGTGGGGTATCCGCCCTGACCTTTTTGA 154 29 96.6 32 ............................G TATCACTAACCCCAGCAGCAACCGAAGCACAC 215 29 100.0 32 ............................. CCGCGTGCCACCATGGCCCGCCGCCAATTGCT 276 29 100.0 32 ............................. TCGTCGAGGTTTTGAGGTTGGGGGGATTTATC 337 29 100.0 32 ............................. CGAAGGTTTAATGCCGCCAGATTGGATCTCCA 398 29 100.0 32 ............................. GTCCTCGGTCCAGCCCAGGGCGTCGTAAATCT 459 29 100.0 32 ............................. CAGCGCGGGCTGGCTGGGGGTGTTAGCCGCTA 520 29 100.0 32 ............................. GATAGCCGCGAATTTAAGAATCCTTTTGCTGT 581 29 100.0 32 ............................. GCACCTTGCCATTCTTAGCAATCTGATCATTA 642 29 100.0 32 ............................. CTCAAGCCAGGTGAATGGGAATTCACTCCCGA 703 29 100.0 32 ............................. ACGACTACCGACACACCACCCAGCGCGGCATC 764 29 100.0 32 ............................. CTCGTCACGGGTAACGCCACCAAAGCCGCCCG 825 29 96.6 0 ...........................G. | ========== ====== ====== ====== ============================= ================================ ================== 14 29 99.5 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : ACGGAGCCAATCTGCGGGCGCGGTGTCTTACG # Right flank : CTTCCATTCTGCTGTGGAAGGTACAGAAAGAAAGTCTGACCTGTGAAACGTGGGGATAAGATTTTTCTGTTAAAAAATACCCGTTTGCCCCACAGTTTTCCGCGGATTTGGAAGAGTGTTTTCTGCGGAACGTAGTTTTTAAAATCGGACCACACGGTCCCTACATCCTCATCACAAGATGCGAGCAATCCTCATTTACGCTTTTTCGCAGAGGAAGCGGATGACCTGGACGTACTCGAGTCTGTTGGAAGAAATGCAACATGGTGCTGGAGTGAAACCCTATACAGCGTCGAAGCGACATTGGTTATCTTCGCATACATTGATGACGTCCATGTTGCTACTGGGCCAGTGGAAGATCATTGCTCTAGATCTTGAATTGAGTCACCGAGCGCTGCGCGAGGCGGGGTTGTGAGGATTAGCGGTCGGATGCTCAGTGTGGTTTTAGTAAATGTATTTATCTGCCTTGAAAGTTTGAGCCGTCCCAACTTTTAACCGCCAGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [18.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 32-609 **** Predicted by CRISPRDetect 2.4 *** >NZ_JULV01000040.1 Corynebacterium striatum strain 963_CAUR 426_706_15422, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 32 29 100.0 32 ............................. CACAATCATCATGCCGCCATACAAGCCCCGCG 93 29 100.0 32 ............................. AGTTCCATTACGCATCCTCCCCTGCTGCTACG 154 29 96.6 32 ............................G AAATGGCAGTCAGCGGCCCATGGAAAAACCTC 215 29 100.0 32 ............................. CCACGCCCCGTATTCCGATACCGCTAAAGGAC 276 29 100.0 32 ............................. ATCTTGGGAGGCGTAGCCTCCTGCTTCAACCC 337 29 100.0 32 ............................. CTAGTGGTGGTAATTCTCAGGTACCTGCAGGC 398 29 100.0 32 ............................. CCGAACCGCCCTTCTGAAAGGAGACACAATGC 459 29 100.0 32 ............................. TCTTAGACGGGCCTTACGGCACCTACGACCCG 520 29 100.0 32 ............................. TGGACGGCGGCGTTAACGTACATGCCGGAGTA 581 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 10 29 99.7 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : ACGGAGCCAATCTGCGGGCGCGGTGTCTTACG # Right flank : TCATCCCATGCTTTGCGCACGATTGCTTCGTGGTCCGCCTGCCGGTTCGTCGTAGTTGGTACCGGTAATCCGCGTAGTTGGTACCGGGTTTCCGGGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [18.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.68 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 241-29 **** Predicted by CRISPRDetect 2.4 *** >NZ_JULV01000055.1 Corynebacterium striatum strain 963_CAUR 575_272_5108, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 240 29 96.6 32 ............................G GCTCGACGCGGCGTCGAAAGCTTGCTTTCCGA 179 29 96.6 32 ............................G CTCACGGCAGGTACATTCCACTCGCTGTCAGT 118 29 100.0 32 ............................. GCGTGGGATTGGATTACCGACGTAGTCTCTGG 57 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : ACGTAGCGGTCACCTGGGATGTGGGGTCGGT # Right flank : CCACGGAGCCAATCTGCGGGCGCGGTGTC # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [13.3-18.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //