Array 1 2303-1794 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAVU010000028.1 Vibrio metschnikovii strain C11G.1 Scaffold28, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2302 28 100.0 32 ............................ GATGGTTGTGATTTCTCTCCTTTTTTCGAATG 2242 28 100.0 32 ............................ TTTGATTTAGCGTTTTGTGGTCTTGAACAAAA 2182 28 100.0 32 ............................ ACGAAGAAACCCAGCAAGTCGCCAACGTTTTT 2122 28 100.0 32 ............................ TTTTGCATTCGGGTGGGATGGTTTTTCCGCCA 2062 28 100.0 32 ............................ CGAAAGAAATTGCGCGAGGGTTTGAACGGCAA 2002 28 100.0 32 ............................ GTCAGCAAGGATCCGCGCCATGTCAGCTTTAA 1942 28 100.0 32 ............................ AGATATTTGAAAGTGAACTGTTTCATTGTTAC 1882 28 100.0 32 ............................ GGACACAAAAGCGGTACGTTCAGCATTTACCA 1822 28 96.4 0 .............T.............. | A [1798] ========== ====== ====== ====== ============================ ================================ ================== 9 28 99.6 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TGTCGGCTTTTGCTCTGATAAATTGTGTGCGTAAAAGGTTCGATTGATGCTGAAAGGTCTCTTCCTTTGGTGTTGTTTGCCCATTGATTCCGCAGGCTAATTCGCTTCAACTTATTTGGGATCTTATTTGCACCAATGATTGCTGAAAGTAGGCAGGTTTATCATTTTGAGTTAAAGTGGCCGCAACCGATAGTCATTGTAAAAGTTCAATGTAATCAATGAGTAATAAAGCATAACAAACACTTCAAGAGGGACTTCCAACGCGCAGCATTTTCATTATGCGTTGATTTCGGTGGTTTCAGTGTTGTGCGGAAACTTGGTAGTAGCGTTGTCAGCCCCTTAAGTGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTATTATTAACAATAGGTTACTGCTAAAGTTTCATA # Right flank : TTGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTAAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCATTGATTTTATTAGTTTTTAGTGTAATGCAGTTAGTTGGTAGTCGCGTTGCTCACCCCTTAACGCGGCGTTATGGTGCTCTATAGATTTAAGCACAGCAATAGGAAAGGAATTTTGTACGAATGATACGTAACTTTTATACATGCGACAAAGAAGTTGACCACAATAGCCATGATGGTGAAGGTTCAATCGATATTTATCGTGCATTTAGGCGTAAAGATTTTGATGGTGCTTGGGATTTTGCAATTCGCGTTGTCATGCCACCGGGAAGTTCCATGGGAGAGCATACTCATGGGGATGATGAAGAAATGTACATTATTTTGAAAGGTGAAGGGACAATGATCATTGAAGGTGAAGAAAAGAAAGTATCTTCAGGTGATATGATCGTAAATCAGCGTTTTGGTACTCATAGCTTATTGAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 125139-123733 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAVU010000010.1 Vibrio metschnikovii strain C11G.1 Scaffold10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 125138 28 100.0 32 ............................ GTCAATAAACGTGATGACATGTCGATAGTGTC 125078 28 100.0 32 ............................ ATCATGTGCAAGGCTTCATAGATTCGGCGTGC 125018 28 100.0 32 ............................ AAGTCTCACAAAAATATTTTGATTTGATTTGC 124958 28 100.0 32 ............................ AGTTAAAGCCGTTGCCAGCGAAAACAATACTG 124898 28 100.0 32 ............................ AAAGAGCTAGACCCCGTAGAAGGCGTAAACTG 124838 28 100.0 32 ............................ ACAGAGAAACCGAGACGCCAAAACCTTATACT 124778 28 100.0 32 ............................ GTTTATAAGTGCAATCGCCTTGAGCATTCCGG 124718 28 100.0 32 ............................ CCAAACTTAGTGCCAGCGGAGTATCCCGACTT 124658 28 100.0 32 ............................ GCAAGTATTGAATTAACAGGCGCGGACGGTGA 124598 28 100.0 32 ............................ TCCTCATCTCGATAAAGTTCAGTTGCGTAATT 124538 28 100.0 32 ............................ AATTAGTTGGCTATCTACAACAGCGAGATGGC 124478 28 100.0 32 ............................ GCTAACGCGCAATCATCTGAGCAAATTGTTTC 124418 28 100.0 32 ............................ TTAAACGCTGATCGCTCAATGCTTCACTTTAA 124358 28 100.0 32 ............................ GCTTCGGTCGCTCCCTACAGCACTGGGGTGGC 124298 28 100.0 32 ............................ GCTGGGCCGCTGTCCCCGCCGTTAATAGGCAT 124238 28 100.0 32 ............................ AATCATAACAAGTACACCTTTGCTAAAATGAC 124178 28 100.0 32 ............................ TTGCAAAGCATAAGCAGGACGGCGGCGCGTCT 124118 28 100.0 32 ............................ ATCCATAATTTGTTTCTGAGCTGCTAAATATT 124058 28 100.0 32 ............................ TTAATTGGGGTTTTTTCTTATCTGTCGTAAAC 123998 28 100.0 30 ............................ TTTGAAAAAGAGAAGCAGAAGCCATTCCGT 123940 28 100.0 32 ............................ GGGTGCGTAAACATTACGCAAGTAGTTGTCCT 123880 28 100.0 32 ............................ CTGTCCGTCAACGTCAGCATACACATGACAGT 123820 28 100.0 32 ............................ ACTAACTGCAAGTAAGTGACGTCAAGGATCTG 123760 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 24 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GGATGTGACTTACGTAAGCTTTGTGCGCAAGCAGGTGAAATCGCCCGAGCGAATAGAGCGGGATATGCAGCAAAAAGCGGCATTATGGGCAGAAAAATCTGCTAAACCGCTGGAGGAATGCTTGGCCGCTTTGCAACAAAGCAAGCCGACAGCATTGTGCCGTTTGCCGTTTATTTACCTACATAGTCAGCAAACTAAGCAGCGATCACCCGACAAAAACAGCAAGTTCCCGTTGTTTATTGAAATGCAGCAACAAAGCGCTTTACAAGATGGTCATTTCGATTGTTATGGACTGAGTACTAAAGGGAATGGGCTTCCTACGTTAGCCACCGTACCGCATTTCTAAAATGAACGAAAAAGGGTATTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGTTTTAAATACAATGGGTTACAATGGACGGTTTTTGATAAGGTAAAAATGCGATTTTTATCCTAACCAACTGTTGTAACTTATTTTTATTGATTTATTCTATA # Right flank : CGCCGGATTCGATGGAATCAAACTCCCGCCAGTCATCCCCGCGAAGGCGGGGATCCATTCTGCAACAGATGCCAAGTGCTTAAGTGAGCGATCAATTGGCCACAGATTACTGATACTGCGCATAGATTCCCGCCTACGCGGGAATGACGGTTTGGTTGTGGTTTTGGGAGCTGAACTCCATAGATCCCCGTCATGTTTTGCCTGCTACTGCTGTGAGGCAGGGAAATGAAGGCGTAGCGATCATCGAAAACTGCTCCACTAAATACACTTAGTCAGCATAGATTCCCACCTTGAGGGCAATGATGCTTGACGCTTTGAATACTCGATTATTCACCGTGATTACAAGAAAGCGTGAGTTGTTTAACAATATGTGCGCCTAATTCCTTAGACACTACGTTGTATGATTGATGTGAGTGGTGGAACACATGAGCTCCCTAACGTTACCTTGCCAGCGAGAGATTGATCTCTCATCAGAGTTAAACGTCGTATTACAAGACAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 169752-169425 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAVU010000010.1 Vibrio metschnikovii strain C11G.1 Scaffold10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== =================================== ================== 169751 38 100.0 34 ...................................... TTAATGCTTCAGTGGTAATGCCAATTTTATCTGC 169679 38 100.0 33 ...................................... CAAATCAACCATCTGTACGTTTGTCCGTGTCTG 169608 38 100.0 35 ...................................... TATAAAGCCAATAAGTAACGTTGCTGTGATTACTA 169535 38 100.0 35 ...................................... TTTTGCTAACAGCCCAAAGAACATGCTTTATATGT 169462 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== =================================== ================== 5 38 100.0 34 GTCCATCTGGACAACGCCCTGACTGAAGGGATTAAGAC # Left flank : TCATCAGTTATGATATCAGCTGTCCTAAGCGTTTACGAAAAATGCACAAATACTGCAGCAAATACGCCTGGCCGTTACAAAAGTCAGTTTATCTCTTTGCTTTATCGCGAACGGAAAGAGAAAAAACCTGCCAACGTTTGCTCAGTATGCTTGATCAACAGCAAGATAGGCTATTATGTCTGCCTTTTACCTTGTTAGAAGGCAGCTTTCATCAGGTACCAGAGAGCCCATTAATCTTGATCCACTCTGACCCGAGATTAGTCGGCTTTGTTTACTAACCACCCGCCATGATCGAATAATCAAGGGCAGGGGATATTGGCCTGAGTTAAGTGGCTTATTTTTTGCTGTTAAATTTAATCTTAATTATCATCGCTAGTTAGCCGCTTGCTCTATTTAAATGGTATGACAATTGCTTATTTTTGCCTTGCGGGCTTTTGTTTAAAACGCTTGTTTAATGATAAACTTGCATTAATAAAAACAATCGGTTATAAATAGCTTCT # Right flank : AGATATAGGGTGACGGCTGCGTAATCTTTTTTAAATGACCGTAGTTACGGGATGAAAAAACAGTCGGATTTCAAGGTGATTAGGTGTGAAGCAAAATAAAAATGACGCACTCAGTAAGAGGCGTCATTTTTTATGGTTCTGGCCTTATTTAATCTTGCTGAAAATGAATGTTTTCAGGTAGCACATTTAGACCTTTATATGCAATCGGGGTTCTGACGACCTCGCATTTTAATGGCTTGTAGGTATTAACAGTAACGATTTGATAATATTTTGCCAACCGAGTACCAAGAGCATCCGTCAATGCCATATTGGTTTCTTTCAGTAATCGTACCCATAAACTTTTATGGTATTTAACCAACGCTTTTACAATATCGTCATCGTTTTTTTCTTGCAGGCGTGTTTCATGGTTTGCATACAAAAATTGAATTTGCTTATTTTCTTGCAGCAACCAACGATTACGATTGTTCCGTTCGTTTAATGGTGTATTTGATGCTTCATCA # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCATCTGGACAACGCCCTGACTGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.90,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.01 Confidence: HIGH] # Array family : NA // Array 1 3379-4186 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAVU010000032.1 Vibrio metschnikovii strain C11G.1 Scaffold32, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3379 28 100.0 32 ............................ CTTGTAAAAGCCGTTGCCAGCGAAAACAATAC 3439 28 100.0 32 ............................ CCTTGGTAACTTCTGTCTTGCGCTCAACAGCA 3499 28 100.0 32 ............................ CCTTGTGCATGCAACCGCCTCTTGAAACCCAT 3559 28 100.0 32 ............................ TTGGCAGATCAACCCCAACGTTGTTGATGCTG 3619 28 100.0 32 ............................ AGTAGACGCAGTATAAGGCTTTGGCGTTGCGG 3679 28 100.0 32 ............................ GGTTCTTGCTCTATCCATACGTGAGTGCCAAT 3739 28 100.0 32 ............................ TATGGCGAAGAGTATGAAATAGCGTGTACTTG 3799 28 100.0 32 ............................ ATTGTTTGATTCATTTCTTCAATGTCAGTGAG 3859 28 100.0 32 ............................ AGAACGGAAACAACTCAGCCCATGATGTAGCA 3919 28 100.0 32 ............................ GTCGGAAGGTAATGCTAATTGGTATAGTTTAA 3979 28 100.0 32 ............................ GTTCAAAATTAAATAATGTTTCACTGTTTTGC 4039 28 100.0 32 ............................ TGCTACTAACTTGTGCTCAAATGACCAGCTAC 4099 28 100.0 32 ............................ GACTAGCTCGGAGTTGAGCGCGGCCAGCTCCT 4159 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 14 28 99.5 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : CCAAAAGATCGTTTGTGTTATCTCGAAGATGAATTAGCTGATGTTCTTTGGGACTACTTGAATGCTGTGCTATCACTTGAGAAAGAAAAAGGTATCAACCTTGACTCAATTATCGAAAGAGCTTGCCGAAAGTATGATGAGAGGGTAACGGCAATTGAAAGTGGTATTTCGTGGGATGAAGTTAAAGAGAAACAGAAAAGTGAATTAGCCCGAGAACAATCGTTACAACACACATAACAAACAATTCAAGCAGACCCTCAACGCGTGGCATTTTTGTTTTGCGTTGAGTTTAGTGATTACGGTGTTATGCGGGAAGTTGGTAGTCGCGTTTCGGGCTACTTAATTGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACCATTATTAACAATAGGTTACTGCTAAAGTTTCATA # Right flank : AATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCGTTGATTTTATTGGTTTTTAGTGTAATGCGGTGAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTATAAGCACTCAAGGCTCGTACGGAGGATATATAAATTGGAACTGATTTATCATTATACTAGTGTTGCAGGTTTGAAGGGTATCTTAGGGCAAGGTACACCTACACTTCGAGTAACAGATTCTAGATATCTAAACGACTCGAATGAAATCCTTCGTGGTGTAGAGCGAGCTATGAATGAAATTTCTCAGAGTCTAAGCGCAAAAAAATATGAAGAACCAATACCCAATACAATTGAGTTTATGGAGCGGATTATTAATTCTATTGGCCGCTCTCTGTTTTTTACTGCATCTTTCTGTAAAGAAGGGGATAAACTCGCTCAGTGGGTGTCGTACTGCCCCCTAAATGGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 478-1345 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAVU010000036.1 Vibrio metschnikovii strain C11G.1 Scaffold36, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 478 28 100.0 32 ............................ TATGATTTAACAAATTGAAGCTAAAGAGGCGC 538 28 100.0 32 ............................ GTGGTGAAATGTTCACTCGTTTACGTGGTTTT 598 28 100.0 32 ............................ GTTGGCGGCTTTCGCATGAGCTTCGTCAACTG 658 28 100.0 32 ............................ ATCAATGACGAACTAGCCAAAGCGAAAGTTGC 718 28 100.0 32 ............................ GACCTGACGAAGCAGTACAAAGCTGGATGATT 778 28 100.0 32 ............................ ACTTTGCACGTACTTGGAAGCATCAAAAATAA 838 28 100.0 32 ............................ AAATAGTGAAGGTTTTTTAGTTGCATTTCCCA 898 28 100.0 32 ............................ AAGCGACTCCAAGAGACTTGACCTAAATTTAA 958 28 100.0 32 ............................ AGTCTCCAAGTTCTTGGAAATCGTAACCCATT 1018 28 100.0 32 ............................ AACAACCAATACGATCATAGTAACAGCAACTT 1078 28 100.0 32 ............................ ATGCTTGAAAATATGGTCGTCTATGACAAAGC 1138 28 100.0 32 ............................ TTTATATACGGGCTTGGTGATATGGATGTTTT 1198 28 100.0 32 ............................ TTCTTAAAAAGAGCCTCGAAAAATCATTGGAG 1258 28 100.0 32 ............................ GTAAACGAGTTCGTAAACGCTTTGCTACAAAA 1318 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 15 28 99.5 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GTTTTTTCAAATCTGAGCGTTCTAGTCGGACTGAAAATGGTGGCGCACTCTTAGTTTTCTATAGTTCAGATATTGAAAGCACATTGGAGAAAGTTGTGAAAAATGGCGGCGATATCATCCGTCCAATCTTTGAATTTCCTGGTGGTTGTCGTTTTCATTTTATAGAGCCAAGTGGTAATGAATTTGCTGTTTGGTCTGAAGCACGCGCATAACAAAGCGTTAAAGAGGGATTCGCAACGCGTAGCATTTTCATTATGCGTTGATTTTATTGGTTTTTAGTGCAATGCGGTGAGTTGGTCGTTGCGTTACTCACCCCTTAACGCGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGAATTTTAAGTCATTGATTTATATTGATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAAGTTACTGATAGAGTTTCATTG # Right flank : AATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCTTTGATTTCATTAGTTTTCAGTGCAATGCGGTGAGTTGGCAGTTGCGTTGCTCACCCCTTAACGCGGCGTTATATTTCTCTTAAATTCAACGTGTTACAAATTTAAAAGTTAAGTGATAATGTGGGATCTTTGCTGGTTCATGATTTCTTGTGATGGATAGCTGTTGATTTGATCAAGTTTATCAATGACTAAAACATTATCGTTTAATCGCTTGGCAGCTATTTTAATTTGGTTTGAATTAATGGTTTGTTTCTCTGAGATTTATCATTAGAATCAATGGGTAAGCTTGAGTCGATTTAAGAATTAACGGTTTTTCTGTATCAAAAGTTAGCTCATTTTACATTAAGTGTTTGATGTTGTTTGCTATTTTCAAAGGTTGCTTGGTGTTTCAGTAGCTGTCTGGAACTGAAATATAAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //