Array 1 103532-102892 **** Predicted by CRISPRDetect 2.4 *** >NZ_QQOQ01000013.1 Aeromonas veronii strain XH.VA.2 Contig13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 103531 29 100.0 32 ............................. TTAGCGGGCAGGGCTCTCCTATCTCTCCGCTG 103470 29 100.0 32 ............................. GTATCCGCTTCCCTCTACCTGAAGCTGTTACC 103409 29 100.0 32 ............................. GTGGCCATCAGTGGTCGGTGTGTTTGGTGAGC 103348 29 100.0 32 ............................. GTGGCCATCAGTGGCCGGCCTGTCGGGTCAGC 103287 29 96.6 32 ............................A ACGCCCGCGTGCGTGCTGAGCTCGCTCGCAGC 103226 29 100.0 32 ............................. GGTGATGACTGAAAGATGCTCAGCATGAGTGC 103165 29 100.0 32 ............................. GGGGCAGCCAGTCGCTGATCACGCCTGCCGAC 103104 29 96.6 33 A............................ CATGGGAAGGAGCAGGATCTGAAAAGTCTTCGC 103042 29 100.0 32 ............................. AGTACGTTGGTAAAAATGCCGAAAAAGATTTT 102981 29 86.2 32 ..........TT........A....G... CCTGCGGAGTGTCTGATGATTAGTCTAGGCCA 102920 29 75.9 0 CC.C.......T............T..TT | ========== ====== ====== ====== ============================= ================================= ================== 11 29 95.9 32 GTCTCTCCCGCACGCGGGAGGGTTAACGG # Left flank : CAGGAGGCGAAAATGACGACATGGAAACCGATACACTGCGCTCCGCGTGATCGGGTTATCCTCACCGATGAGGGGACGGCTCGGTATGTCAGCGCCAAGGAAGCTGGTATAGCTGGAGCCGGTGGTTGGTATCTTTGCTATTCATGTGGCGACTTACCCCTGCCACCGGCCAGCGACAACCCCGACTCGTGCTCCGTGTCACCCAGCGTCTGGATCGACCTACCAAAGCCGGGTGTCCCCCAACGGGACATATCCATCACCCCCCGGCCTGCCGAACTGGGGGGCGGTTGGCAGCTGAGGCTGCTGGAGTATGGAGAAGAGGTGGGAGGAGGTGTTTTTCCTGCGGGCTCCAGCCAGTCCGAGCAGGACAATGCCTATAACGAGGCCCTGGCGGAAGCCGAGGAGTGGTTGGATAGCCTTTATGGCGGCCACCAAAATGCCAGTGCATGAACCCCTTCGAACGTGGTGATATTGTGCTGCTATTTTCGTTATTATGAAGG # Right flank : AACTGGCAGCCAGAGCCCGAATACAGAATTCTTGATGGTCGTCACTCTCAAAACCCATCAAAAATGCATTAGCCTATCCTCTCAGGAGTGGTGTATATTTATGATGCGAATGTTGAGTGAGAGTGAAATCATGGGTGCCAAGAAGAAAGCGTGCTCGACCACTGTGGATGATGTAGACGTAGCTTTGCAGAATGAATCGGGCCCTGCCGCTTTGCAAGAAACCCCTAAGCAGCATAGGTTCATACTTCAGTTCGAGGTCTGTGTCACTGAGTTTGAAAGCGCAACTGGTGGAACCGTTGGCCGGAGAAATCGCGTTCAAGAGTTGCTTGCGCCTGGTCCCGGGCTGTCGACCCGCTCAATGTCCAAACTGGACACCGGTGGTATCTAGGACTGGTCCCGGGCTGTCGACCCGCTCGATGTCCAAGCTGGACACCGGTGGTATCTAGGACTGGTCCCGGGCTGTCGGCCAGCTCGATGTCCAAGCTGGACACCGGTGGTAT # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCTCCCGCACGCGGGAGGGTTAACGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.10,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 123082-122077 **** Predicted by CRISPRDetect 2.4 *** >NZ_QQOQ01000013.1 Aeromonas veronii strain XH.VA.2 Contig13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 123081 28 100.0 33 ............................ GACGCTGGACATGGAACGCCAGTCGATGCAGGC 123020 28 100.0 33 ............................ TGATCATTCCACCTCCGACCTGCTCCCCACACC 122959 28 100.0 33 ............................ GTCTACACGCAGGACGAGGGCGTTTTCCACATC 122898 28 100.0 33 ............................ CTCTAACGTCTCCACATTGGAGGATGCCGCCTG 122837 28 100.0 33 ............................ CTCTAGCGTCTCCACATTGGAGGATGCCGCCTG 122776 28 100.0 33 ............................ TCTGAACACCCGAACCTGATCTCAGCCCTGTGG 122715 28 100.0 33 ............................ GTAATCACGCACCTGCTCAATGAGCTGTTTCTT 122654 28 100.0 33 ............................ CGCCTGGCTATGCAGGCCAGCAAGCTGGCCGCC 122593 28 85.7 34 T..CT..............T........ GCTCAACCCTGACCAGGAGCACCAGTTGACAGTG 122531 28 96.4 33 ............T............... GCCTGATGAGGTGTATGAGAGCATCGAGCGACT 122470 28 100.0 33 ............................ CCGCCTCCAGTGACGTTACTCGCGGTATCAACG 122409 28 100.0 33 ............................ GTGTTTTGCGCCTGTTTTCGACTGCGCGTGTCG 122348 28 100.0 33 ............................ GGGTGCTGTAATGCCGGTCTGCCTACCGGTCCC 122287 28 100.0 33 ............................ GGCAGGGCATTGACCGCCTGAAAGTTTGCAACG 122226 28 100.0 33 ............................ CTCCGGTCTGTTGCTAGGCCACCAGGGATACCG 122165 28 100.0 33 ............................ GCGGGCAGAGCGGGCTGTGTTGCCGCTGCTGAC 122104 28 75.0 0 ..........CA...........ATTGA | ========== ====== ====== ====== ============================ ================================== ================== 17 28 97.5 33 GTCTCTCCCGTGCGCGGGAGGGTTAACG # Left flank : GTGATTTTGTATTTATGTAGTGATGATGCAGATATTATATTGCAGCCCAACAGTTTAGGTGGGGGGCGTAAAAAGAATGCGAAAACTGGCATGTCCAGTGTTGTAAGGGTTTTTGCTTGTGGCTACAGAGTATCGAGTGCACTAAAATATCATGGTTCTAATTCACATACAGAAGGGAAAGATTCGCAGAGGATGGCATCTCATATCCGCCGAGCTCATTGGCATACATACTTGGTTGGGCCGAAGGTGGATAAAATACGGATATTGAAATGGCTCTCTCCCATTCTAGTAAATATAGATGAATCGGAATATATAGCCACGGTGAAGCGGGTGAAGACCTGAATCGCACCTCAGCCTTGTTCCCGGTGAGCAGGTGTAGGCCTTAATAGCCGACAGCCAGAGGTGATAGAGTTTCAGAAAAAGTGTCAGCACGAAAAATCAGAGCCTCAAACATCGCTGAATATGCTGACATCGTGCACCCATCTTCGTTATCATTAAGG # Right flank : TGGGGCTAGAGATCGCTCACCGTGGGTGAAGGATGTGGCAGATGGCTGATATAAAAAAGGGGCAACCGATCTGGTTGCCCCTTTTGATTTTACCCCCTGCGAACAGGGGGGCGGATTATGCGGTGATACTGGGGGGGCCGCAAGAAAATAGCCGATAACCACCCGCGAACGGGTGGATGAAAGAAGATGTGATTAGCTGGCCTTCTTATTGAAAGAACTTGTAACGTCATCGCACCAAGCTTGATAGGCGGCCTTCAGCACATCACCCTCAAGACGGAATCCATCCTGGTCAAACTCTACCTTACCGACGGTTACCGGCACCATCGACTTGGGCTGCCAAGTTTTGACTTCCCAAGACCCAGATACCAGTCCGCAGCCATGAGCGAGATGACCACCCATACGGGGGGAACGGGCAAACTCCAGCAGGGCGGCCAAGAAGAAGCCCAACTCGATCATGTTGACGCCCTTCAGACCGATCCGATGCTCCATGACAGTTCCTG # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCTCCCGTGCGCGGGAGGGTTAACG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.10,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //