Array 1 40481-39070 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMJA01000248.1 Acinetobacter haemolyticus TG19599 A_haemolyticus_TG19599_249, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 40480 30 93.3 30 ............................AA GATTAGAATAAGCATCAAGCCGACTAATGA 40420 30 96.7 30 .............................C AAGTAATAACTTAACACCCTCAACAGCTGC 40360 30 100.0 30 .............................. CTCGTCATGAAGGTTTTGGAGAAATGCTTT 40300 30 93.3 30 ............................AG AAAGCGTGGACTCCCCGAAAGTCGAATTTT 40240 30 96.7 30 .............................C TTAGGGCATCAAATAAGCTATGAGTTGCTT 40180 30 93.3 31 ............................GA ACGATCCAAACAATAACAATCCTAACAATCC 40119 30 96.7 30 .............................G CACCAATTGCACCTGCACCGATTGCTGTGT 40059 30 93.3 30 ............................AC CATATATGCCTAAAGAGCATTTACACCTAG 39999 30 93.3 30 ............................AA TCAAAAATCTATGATCAATGCACCAGTCGG 39939 30 96.7 30 .............................A CCCGCAAAAAAAATTTGTTATATGCTTATT 39879 30 100.0 30 .............................. CATTCGATCTAATATCGGGTCAAAAGCTAC 39819 30 100.0 30 .............................. GAGGAGTCTGTCTCCAGTCACAATCTTTCG 39759 30 100.0 30 .............................. TCGACGGAGTTAGAAGTTAAATTTCTTAAA 39699 30 93.3 30 ............................GA CAGAAAGAAATCGCGAATTAATTTCTGGAT 39639 30 93.3 30 ............................GC GAGTTTATTAACCGCGATGAAGCTGGCCGA 39579 30 96.7 30 .............................G TTTAATGCGGGTCTCTTGCCAGTTTAGCGG 39519 30 96.7 30 ............................A. CATCAATAGGAGATTTTAAAATGGCTAATA 39459 30 93.3 30 ............................AC AGATACGCACCAACTTTGAAAAAGTTTGCT 39399 30 96.7 30 ............................G. TAATTTATTAGATCAGCAACTAAAACAAGA 39339 30 96.7 30 T............................. AACTACACGTTCAGTCATGGCAGCCACCTA 39279 30 96.7 30 ............................A. TACCATCACTGCCACCAGTGCCGTTGCCGA 39219 30 100.0 30 .............................. TGAACGACAAATAGAAATCTTTCATGTGAT 39159 30 90.0 30 ........................T...CA TCATAATGACAGAAGGCGAGTCACGGCGAG 39099 30 83.3 0 ........T.A.............A.T.G. | ========== ====== ====== ====== ============================== =============================== ================== 24 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GTCAGTGGCTAGAACGATTGATGGATTATGTGCACATCATTCAGCCGCGTGAAGTGCCGCAAGCCAAGGTTACTGGTCATGCACACTATTATCGAGTCAATCCGAAGATGAGTATAGAGGAACGCATTGCTCATCAAGCACAGCGTCATAATATTCCTTTGGCTGAAGCTAAGCAGCATTTTAAACAATATGTTGAGCAACCTGTGGTTGAGCCTTATGTTAGTTTAAAAAGTCTGAGTGCTAAACGTGAGGAAAATATAGATCGACCGTATCGCTTATATATTGGTAAGTCTGTTGCTGATGAGGCGAAAGATGGGAAATTTGGAACGTATGGGCTAAGTCGAATGGCAACAGTTCCAGAATTTTGACCCAATATTTTTTTTATTCTTTAACAGCTTAATAAAATCAATAAGTTACAATAAGTCGTTTTTTGATTGGGTAAATTGCTAAAACCTATGATAAGTACTTGTTGTAACTCATATTTTTACTATAATTTTATA # Right flank : GTAAATGGTTATTCCTAATACATTCAGGCACTTTAATTTTTAAATAAGAAAATATACCCTGAACCTAATATATTTTTAGTGAATTTTTCATGCGCGGTCTTTATCTCATCACCAATGATGATCCCATCCAATTATTACTTGAAAAATTAGAAGTTGCTTTAGCGACGAGAAAGGTTGCGATTTTGCAATATCGCCGTAAGAAAGTGGCAAAGGCAGATCAACCACGTGAAGTTGAACAGATCAAAACATTGTGTGAAAAGTACCAAGTACCTTTTGTCATCAATGATGATTTGGCTTTAGCTGAACAATTTGGATTAGGTGTCCATTTGGGGCAGTCTGATGGGGAAATAAGCGATGCTGCTGCACGTTTGCCGCAAGGTGTGATTATTGGTCGTACATGCTTAAATTCACTCGAATTAGCTGAAAAAGCAATTGCTGATGGGGCGACTTATGTTGCTTTTGGTGCAGTCTATGCCACCTCAACTAAACCTGAAGCAGGT # Questionable array : NO Score: 5.32 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 49048-48840 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMJA01000014.1 Acinetobacter haemolyticus TG19599 A_haemolyticus_TG19599_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 49047 28 100.0 32 ............................ CAACACATACTCATCAAGAATTACTTTTAATT 48987 28 100.0 32 ............................ AGTACCCGAACAACACACGATCACATTATCGG 48927 28 100.0 32 ............................ TAACTTTGTAGCTGTATCTGTAGCCATTGTTG 48867 28 85.7 0 ........A.............C.T..T | ========== ====== ====== ====== ============================ ================================ ================== 4 28 96.4 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GGTAAATGCGATTTGTCTTTGTAGATTACTCACCTCAATTGTATCTGCATCCACGATCGTTATTTTGCCTACACCTGCACGAGCAAGTAACTCTGCACTTGTACAGCCGATCCCTCCAGCACCAACAATCAGTACATTTGCCAATTTTAATTTTTCTTGTGCTTCAATATCCCAACCATCTAATAAAATCTGACGACTATATAAATGCATTTCGTCATCAGTTAATTCAAAAGTATGTTCTAGATGATCAGACACGTTCCATGATCTCAAAATCGGCTTAACGAATGCTGATTTTAAGTGGCTAATCTCATTTAGCAAAGCATTTAATGCTTGCTGCATCATTTATTTTGACAAATCAACGGATTTACCCCAATATTTTTATTACTCTTTAACAGCTTAATAAAATCAATACCTTATGAATCAGCATAAAAACTTTGGGTGTTGAAGTATTTTTCAACCCAAGCTAATGTTTTTTCTTAATTTATTTATGCTATTTTATT # Right flank : ACAATCAAAAACAACCCACAGTACCTAGTGAAATTAATGACTTATATCGCTTTTAAATAAACAATTTGTTAAATTATATAAATAGAATATAAGAGATTTATCATGGAAAAAACTCTATTAAAGTTCATCTGTCTTATAACATTGTTAGTTTCAACAAATCCAAATATATATGCAAATGTTTACATACCAATTCCCTCATTAAAAAAGCCTAAAATATCTCCGCATATTAAAGCTCAAGCACTCAAAACGGATGAGTTTGATGTATCTACCAAACAATTATTAGAAAAAGGCTATATTCCTATTAAATCCCAAACATTTAATGGTAGAGATGATTTTAGAGGTTATGAGCACGTTGTAGCAGCGCTAGAAAAAAGAGCTGATCAAATGGGAGCTCAAATTGTACTATTTACTAATGAGAAGCCAACAGGAAGTGTAGATTATTATAGTTTCACCACTCCCTTTCCTCAAAAATCAACAATACAATCTAACTTTGATAATTC # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //