Array 1 299512-300735 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP010061.1 Enterococcus cecorum strain SA2 chromosome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
    299512	    32	 100.0	    34	................................	ACTCCTATCAAGCAAGAGTTAACACCGATTTTTA 	
    299578	    32	 100.0	    34	................................	TTCTGACATCACACTAACCACTCTAATCCTTGAC 	
    299644	    32	 100.0	    34	................................	AATGAAAAAGTGGAGGGGTTTGTATCCTACTTGA 	
    299710	    32	 100.0	    34	................................	ATACTAGAATGAAGGTATTCTCTAATCGTATTAG 	
    299776	    32	 100.0	    34	................................	CAAACATCCTTTCTCCTGCTTACCCGGCAGTTCG 	
    299842	    32	 100.0	    34	................................	TTGACTTTCTCAGACGATGAATGAGAAGTACTAA 	
    299908	    32	 100.0	    34	................................	TATTAACATCAAGTGCTTTTAACATGTATTACCT 	
    299974	    32	 100.0	    34	................................	GCTAAAAATTGTTGGATTCGACAATGTAATTTTT 	
    300040	    32	 100.0	    34	................................	TCCCCAAGCTTTCCACGCTACAGCACCAATTGTA 	
    300106	    32	 100.0	    35	................................	TGAGAATCCTGAATTTACTACTTATTTTAGATTTA	
    300173	    32	 100.0	    35	................................	ATCATATCAGCATCAAAATATAATCGATAGCCATT	
    300240	    32	 100.0	    33	................................	ATAATAAAATTCCTCCTATTAAATAAAATTATT  	
    300305	    32	 100.0	    34	................................	AAGTTGGTAGCGTTGATGACTACCGTTTGACTAA 	
    300371	    32	 100.0	    35	................................	TCACTCATCGGTTACCACCTCGATGTCAGCAAAGT	
    300438	    32	 100.0	    35	................................	CAAATACGGTTGGTCTTGTTAAGATGCCGCCTTTT	
    300505	    32	 100.0	    35	................................	TAAAAAAGACGGCACATCCAAATGACTGTCTAAAT	
    300572	    32	 100.0	    35	................................	TTCAACATATTCTAATTCCATTCGTCGCTTAGCAA	
    300639	    32	  96.9	    33	.............C..................	TAGTGAAATACATACCAAAAAGTGCATTAAAGT  	
    300704	    32	  93.8	     0	A............C..................	|                                  	
==========	======	======	======	================================	===================================	==================
        19	    32	  99.5	    34	GTCTCACCTTACATAGGTGAGTGGATTGAAAT	                                   	       

# Left flank :   CAATTACTTGCAAAATCAATTCGTGGTGATATTTCAGGTTATCCCCCTTTTCTCATATAATTTGGTGATAACAATGATGGTATTAATAACATATGACGTAAATACAGAAGATAGACATGGAAGAAAGAGGTTGAGGAAAGTTGCAGAATTATGTGTTGATTATGGACAAAGAGTTCAAAATTCTGTTTTTGAGTGTTCTTTAGCCCCTGCTGAGTATGTTGAAATTAAAGAAAGACTATTAAAAATAATTGATGAAACAACGGATAGTATCAGATTTTATAATCTCGGGAAAAACTGGCAACATAGAGTTGAAAAAATAGGATTTGATAATTCGTATGATCCAGATAAAGATTTGTTAATTTTTTGAGTTGAGCGAACCTATAGTGAACAGAAAATCATATATAGGTTCGCCTTAAATAAATGATATTTATCTAGATTTTTATCAATTATCAAAATGGTTATCACTTATAATTATGTTATAAACTGCGCTATTTCGCGCA
# Right flank :  TAGTTTTACTGATACCACATCATTAAGAGTACAATTTGAGAATTATGTAGACCAACCTCCCCAAGCTAAGTGACTTTTGGGAGGTTGGTTTGGTTGGGTTATTCTGCTAGTTTGACGATTTGGGTGCCGTGGAGTTCGTGGATGCCAAGTTGGTGGGCGATTTCTTCGGCATTTTCGTAAGTGATTTGTCCGCCTGGTAAGATGGTGATGCGATCAGCTGCATAGTCAATCAATTCTTTTAAGCGTGGGAGAGTGTCTAAGATGGATTCACTCATTGGACCACCATGGGTAAGGATACGATGGACACCGTGATCAGCTAACCAGTCAATGGCTTCAAATTGGCGTTCGACGGGTATTTCGTCAAAGGCCATGTGGAAAGTAATCTGTAAACCTTCTGCGACTTCAATGAGTTCTTCCATCGCCTCTTCGTCAATCCAGTTACTTGGAGTCAGGCAACCAAAGACCACGCCATCGACACCAAGTTTTTTTGCTTCAATCAG

# Questionable array : NO	 Score: 9.23
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCACCTTACATAGGTGAGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:59.38%AT]
# 	Reference repeat match prediction:         F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 93% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.40,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-65.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.78,0   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//