Array 1 430395-430837 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP010413.1 Bifidobacterium breve strain BR3 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	=================================	====================================	==================
    430395	    33	 100.0	    34	.................................	ACGTCCGTGACCGTCACGTTCGCGGCGTCACCAT  	
    430462	    33	 100.0	    36	.................................	ACCTCAGTAGACGTAGCCGTTGCGGCGGGCGCGCGC	
    430531	    33	 100.0	    36	.................................	GTAAATCTCAGGTTGCGCGAAAACACATGTTTCGAC	
    430600	    33	  97.0	    35	....A............................	TGGCTCGCCCACAACTGGTACTAAGGAGAGGGACA 	
    430668	    33	  97.0	    35	............T....................	CTGTACGGCAAGGCTCAGACCGGCAGCGAGGGCTG 	
    430736	    33	  97.0	    36	............T....................	CAAGCCCCCATACCCCGCGCAGCCCTCAAATCCAGC	
    430805	    33	  84.8	     0	.............T...........G..CCT..	|                                   	
==========	======	======	======	=================================	====================================	==================
         7	    33	  96.5	    36	GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT	                                    	       

# Left flank :   GGCGCTGATGCGCGTCGACTGGAAGAGCGTGGGCCCGATCTGCAGACGCGTCCCTCTCGGGCATCGAGGAGTTCTCGAGGCTCGGCGAGAAGATCGACCGCCGCCGCTTCGACATCCTGCGCACCATCCGGTCCGGACTATCCAACGCTCGCCTGGAGGCCGTCAGCAACAAGATCAAGACCACCATCAAGATGGGCTACGGCTACAGGAACCTCGGCAACCTCATCGCTCTGGTCATGCTCAAATGCGGCGGCCTCAACCTCCAACTCCCCGGACGCCAATAACCCGTAAGCCAGACCAGGGACCCACACCCACACAAACACCCGAAGAGCCATTTTTTTCGTATGCACTCCGTGATGCCAGCTGTGCTATTTAGGATGCCCGGAAAGACGCCAATCTTGACTTTGTCGAACAATGCACATCGACACGCCGATCGAACATGGTTTTTACTAGTGACGAAACACGAAACACCGACTTGACTAAAAACATCCGAAACCCGA
# Right flank :  TGCCGGATTAATACGTTGGTTGATGTCGGTATCGTCCCATCTATCCTTGATATAAGGATTTGTGATGGGGGTAACGATATCAGCTTGGTTCCACTGGTCAACGTATGAGTATCGGATACGGTTCGGTGCGTATGTTTCGATCATTCGCTGATAGTAATCGCGTTCATTAAGAAGCAGGTCCACCAGATATCCGGGTTCGTTTGGGAAATTCTTTAGTGCGCGAGTATAAAGATTGTGGTGTTCGTCCAATACCAGAGCTGGAACGGAATCTAAGCGCAAGAGTTCTTTAAACATGACGAGCCGCCCAATTCGACCGTTACCGTCGGAGAATGGGTGCGTGGATTCGAACATCCAATGTGCTTTTGCGATTGCAAAAGGATCATCTTCCAATTGTGAGTACAAGCTGAATACCTGTTTCATGGCAAGAGGCACATCCGCGGGGAGTACCGTATGAATTCCCTCAAGTTGGCTGATGACGTTGGGCACTATTTTGTATCCGC

# Questionable array : NO	 Score: 8.93
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT
# Alternate repeat :   GTCGCTCCCCATTCGGGGAGCGTGGATTGAAAT

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [6,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-8.50,-8.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.41,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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