Array 1 17731-17161 **** Predicted by CRISPRDetect 2.4 *** >NZ_NHOC01000003.1 Butyricicoccus porcorum strain BB10 BB10_c3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 17730 32 100.0 34 ................................ GAATTTTTCTCTCATTAAATCCTCCCCATTTCCC 17664 32 100.0 34 ................................ CTCCTCGGTATCGCAGATGCCGTAATACCCCCAT 17598 32 100.0 34 ................................ TGCGTAAAAAACTGCTAGTCCTCGCCGCCATGAT 17532 32 100.0 36 ................................ GGACTTGTATTCCGCGTTGTCGGCTTCCAGTGCGGA 17464 32 100.0 36 ................................ ATCGTCCAGATAATAACCGTTGATTTCATACATCAG 17396 32 100.0 36 ................................ ACTTAAAAGTGCCACTAACACTTCAGGGAGAAACCG 17328 32 100.0 36 ................................ CTTCGCTTTCTGCGATATAATCACAGTGCAGTTATT 17260 32 100.0 36 ................................ TCAGAATCCACAAAAGCCATAAGCCTCCTGTTGCCA 17192 32 90.6 0 ..........................AC...A | ========== ====== ====== ====== ================================ ==================================== ================== 9 32 99.0 35 ATTGAATCTTACCTGCGCTTAGGTATTGAAAC # Left flank : GAAGAGGACTGCCATCAACTGAAAATTCAGATGATTTCCCCAATGACCGTTTATACCTCAACATCTGACGGCAAAACACATCCGTACAACCCGCTTGATGACAAGTTTCCTGTGCTAATCAATGAGAATTTTCAGCACAAATGGGAAAGTGCAGTCGGCTCCCCTGCTCCGGGAAATATTGAAATTTATGCTCTTTCTGTCGCCAGCCGTGATAAACTTGTGACGAAAATAAAAAACATCTATGTCACAGCGTGGGGCGGAACATATCTGCTAAAGGGTTCGCCTGATGCACTGAAATTCCTGTATCATACTGGTCTGGGAAGCAAGAATTCTATGGGCTTTGGTATGTTTGATATCGTAAAGTAGATCATTTTGGGGATTGTACTTGAAAAGTGCGAACTGATGTGGTAAAATAGACATTGAAAAGAACTGGAAAAGCCGATTTTTTCTTATTGTATCTTATTTACGTTATTTTTCTCGGTTAATTTTCTGTTTTTGCT # Right flank : AAAGCCGGATACAGAGATTTCAAATCTCCGTATCCGGTTTCGTTTTATGGTTTTCTTTTGTTTTCAACTACTTTTTGACCAAATGTCCAATGGCATCCTGAATGAACTGTTTCAATTGCTTCATGTTTATGTGATTCATATCAGGATACTTGTTTTCCGCATAATACTTCAAATGACAGTCCTTTGCTATAACCTCTGCATTTGCATGATTGGTCATATTACGGACATCCTTCAAGAACAGATAATCCAATGCGATCTGATGCAGCTGCTTAATACTGTACGCAGTAGTATACGGCGAATCTTTCATACAATCCTGTAAATTTCTCAGGGTTGTAATGTAAGTATCATCGTCTTTCTCACGCCATATTTTCTTTCTGTCAGCCAGCTTTAAAAAGCCATCTGTAAAAGCAATCGTGCACGGATCACGATATGCAGCATTTGTAGCTTTCACCCGATCAAGTTCTTCCGGCGTGGCTTTCAGCAGTTTGCTTTTGTTTATC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAATCTTACCTGCGCTTAGGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.50%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.10,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 1 99923-94575 **** Predicted by CRISPRDetect 2.4 *** >NZ_NHOC01000008.1 Butyricicoccus porcorum strain BB10 BB10_c8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 99922 33 100.0 37 ................................. GTTCTGTCTGCGCCGCAACGAACTGCGACCGCGATAT 99852 33 100.0 34 ................................. ATGGTATCCACGATATATTTCGGGAAATTCACGA 99785 33 100.0 33 ................................. AGCATGGCACAAACATTTGGGAGATCATGTCGA 99719 33 100.0 34 ................................. CATACGTGCCCTGTATGCGTCATCTATGAAACGA 99652 33 100.0 33 ................................. ATCATCCGCAACAATTTTGATGGGATTGCCGAT 99586 33 100.0 34 ................................. GGCATAGCCGGCTCTGGAAAATCCGTAGACACGG 99519 33 100.0 33 ................................. TGCGGGCGGGAGCTTCCGCCGGTGGAAGAATAT 99453 33 100.0 37 ................................. TTTGATTTCCTGTGCTGCTTGTAGCACCTTGTCGACC 99383 33 100.0 34 ................................. AAAAAAGCTTATCAACATCTATAAAAAACGGGGT 99316 33 100.0 33 ................................. CTTTACTGTACTTATATTATACACGCATTGCGT 99250 33 100.0 34 ................................. ACTCAGATTCCTGCGGATACCTTTAAACAGATTG 99183 33 100.0 35 ................................. ACTGTCAAAATAAGCAATTCCATCAACGAAATCAA 99115 33 100.0 34 ................................. AGGAAAATCTGGGAATTGCAGGAACGACATCGCA 99048 33 100.0 33 ................................. CGCTTGGAGTGGGTACTGTGCGCATCTGATACG 98982 33 100.0 35 ................................. AATCTGTCCGGCCGCACAGCGTGAACCTTGTGGTC 98914 33 100.0 35 ................................. ACTGGCGTGGAATACTCCGGCGACCATCAGACCGG 98846 33 100.0 33 ................................. CGCGACGTTCGCCCTGTGTATAACGCCGACAAA 98780 33 100.0 34 ................................. AGGAAACGGCAAGTATCTGATTTACCCTGGGCCG 98713 33 100.0 34 ................................. ATCAATTTGCTGTTGAAGGAGGCGAAAGGCAATG 98646 33 100.0 35 ................................. ACACGCCTGACCGGGAAGAAGGTACGGCGCTGCAA 98578 33 100.0 36 ................................. CTGCGCGTGCAGGATATCCGCAAGGGCGCAGCAGGC 98509 33 100.0 34 ................................. AAACATGTGTAATAACCTCCTCACAAAACCAATC 98442 33 100.0 36 ................................. CATGTCTGCGGCGTTCTGCAGATATTCGTCTGCCAG 98373 33 100.0 34 ................................. TTCCAATGCTTTGATATGTGCGGTACAGTGGCGC 98306 33 100.0 33 ................................. AACGTGAATCATACGCTTGCGTCCAATCTGTAC 98240 33 100.0 34 ................................. TGCATTCTGCATTGCGGAAACCCTGCATGTGTCG 98173 33 100.0 34 ................................. TGCATTCTGCATTGCGGAAACCCTGCATGTGTCG 98106 33 100.0 35 ................................. TTATCAAGGCGCTCTTTTTCTGCAAGCACACGTCG 98038 33 100.0 34 ................................. CCATCGGCACGTTGCAGCGTTCATAGGCCATGGC 97971 33 100.0 35 ................................. CAAGTGACCTGCTGCATTGTTGTATTTAATCATGG 97903 33 100.0 38 ................................. GAGGTATACATCAAGGCCGGAACGGAGGAGGCAGAATA 97832 33 100.0 33 ................................. ACATCTGAAACCCAAAGGAATCAGGCAGCCCTT 97766 33 100.0 34 ................................. CCGAAATCCGGGGGTGATTCCATTGCATATAAAC 97699 33 100.0 34 ................................. TATGATTCAGTTTTCCGATTTTGATTTTGTCAGC 97632 33 100.0 34 ................................. TCCGGTGTCAGCTTTGGCGGTGCCATCCGGCACC 97565 33 100.0 34 ................................. CCGTCCTTTCTGTCCATCCGCGCCCCGCAGTGCG 97498 33 100.0 34 ................................. TGTCGTGATACAATTTCAAAGCTCGAAAAAATTG 97431 33 100.0 34 ................................. AACATCAATCAGCAGCGCCTCGACCAGCAGCTGC 97364 33 100.0 34 ................................. TAACAAAAAGCGGCGCAAGAGCAATTCGGGATTT 97297 33 100.0 34 ................................. GGTATGTTACGGATTTTGCTACTGCGCAACTCCG 97230 33 100.0 33 ................................. GAGAAGTTTTAGAAGCTGACTGGAATGTTGACC 97164 33 100.0 34 ................................. CGTGACCCCTACCACGAACAATGACTGGATGCGC 97097 33 100.0 34 ................................. AATCTTGAACTCGTTTTTATTTTTCGACAGCGTG 97030 33 100.0 35 ................................. TCAAAGTCCTACAACAACAGCCCGTGGCAGACCAA 96962 33 100.0 34 ................................. CTCAGGTAGTTTCTCTATCACCGGAATCCACTGC 96895 33 100.0 35 ................................. TATGCGATCTGTGTAAGTATCAACCTGCAGATGAT 96827 33 100.0 33 ................................. AGGTACGTGGAAAACAACCTGCCAATGCGCGGA 96761 33 100.0 34 ................................. TTCTTGATTGAGATAAAAAATATGCTGCTTCCAC 96694 33 100.0 33 ................................. TTGCGCTGCATTGCATCCGCACGCTGGATCGCC 96628 33 100.0 35 ................................. ATCACTCACGAACACAAGGATCACAGCCATGCAGC 96560 33 100.0 35 ................................. AGGCTTGCGGTCTTTTCCTTGTGGAACGGGCAGAT 96492 33 100.0 34 ................................. CTTGATTTTAACACAACATCGGCAGGAAATCAAG 96425 33 100.0 34 ................................. CAGATTGGTGACGAACGATGTATTAACCGCCGCG 96358 33 100.0 32 ................................. TACTAAATCACATAGATGGAACCTGCCATCAT 96293 33 100.0 35 ................................. TCCAGTTATCCCACCCCATTCGTTTGTACGGCAAA 96225 33 100.0 34 ................................. AGATGATTTGGAGCATAATCCAAATTGCGCGTAT 96158 33 100.0 34 ................................. CCAAAATAGATCGTACTCATTGCCAAAATTTCTC 96091 33 100.0 34 ................................. GCTTCCAACGTGTTAGCAACCCCTGCGGCGCAGG 96024 33 100.0 35 ................................. CATCAGCTTCCATTTGGTTTAATACAGCCCGTGTA 95956 33 100.0 33 ................................. AACTCAAACGCGTATTTTCACGATCAATTTTCT 95890 33 100.0 36 ................................. GTCATAAATAACAGTTTTCACGGAATGATAAGTATT 95821 33 100.0 35 ................................. CGAATTTTATTTGTATTGTATCCTGCATTTTTCAG 95753 33 100.0 34 ................................. CTGCATGGTCATATGGTGTGTGGTATGGCAAATG 95686 33 100.0 35 ................................. CATCCTCTGTCACTCCAAAAGAACAAATCCCAATC 95618 33 100.0 33 ................................. AAGGTACATTCGTCAGATAACCTACATTGGCAC 95552 33 100.0 35 ................................. TCTGGAGGCATTTGATTTTATATGTAATGTGTTGC 95484 33 100.0 34 ................................. TATCCATACCCGATCGGAGGGGAACATGGGAAGA 95417 33 100.0 35 ................................. CTTGGCATATCCCCACTTAAACATGGTTGCGAAAT 95349 33 100.0 34 ................................. TTTAAATACACGATATCCTGCCAGCCATGGCAAG 95282 33 100.0 36 ................................. AAACATCTAAAATATATGTATCTCTGATGCACTCCG 95213 33 100.0 34 ................................. ACTCTCGTTACTTGCAACACTTATGTGCTGATAC 95146 33 100.0 35 ................................. AGTTACCCAAAAACATCCCTATTCAAGCCAACAAA 95078 33 100.0 33 ................................. CGGTGGTTTCTGGCAGCTTACGGACGGAAGCAA 95012 33 100.0 35 ................................. AGCACAAACTACCCGAAAATAAGTCAAATAATAGC 94944 33 100.0 34 ................................. CGGAAAGCGGACATTTAAGTGTTTCAGCAGCGGA 94877 33 100.0 35 ................................. CACACTGTCCTATGGCTATATCCAGTTGAAAACCC 94809 33 100.0 33 ................................. ACCCGCAGATTACTTGTTCGCAGGGACTTGCCG 94743 33 100.0 35 ................................. AAGTTTGCTAGAAATGGAACTTTTCACCGAATCCA 94675 33 100.0 33 ................................. GACGAACATACATTAGGGTTTATTGATTCCGTT 94609 33 97.0 0 ................................A | AC [94579] ========== ====== ====== ====== ================================= ====================================== ================== 80 33 100.0 34 GTCGCACCCCGCACGGGGTGCGTGGATTGAAAT # Left flank : GGATGGATATCCGCCATTTTTGTGGAAGTGAGGCGTGCGATGCTTGTTTTAATTACATATGATGTCAATACAGAAGATGCAGCCGGAAGAAAACGTTTGCGTCAGATTGCAAAGCAGTGTGTGAATTATGGGCAAAGGGTACAGAATTCCGTATTTGAATGTAATATAGATGCCGCACAGTATCGTATGCTTCAGGCAAGGCTTTGCGCAATTATGGATCCTGAAAGGGATAGCCTTCGTTTTTACAATCTGGGCAACAAATATCAATCGAGGATAGAACATTTTGGTGTGAAACCAGGATATGATTCAGAGGGATTGCTCATGATTTAATGCGAACCATAAGTGGACATAAAAATAGGAATATGTTCGCACAGATTTGAGCTCATAAAATGACAGATTGGATGGTTATTTTGTGGGTTGATATGTCGGCTTCAAAAGGATATACTATTATTGTTACGAAAGAGAAGAAAAATCATACGTGATATTTGTTTTCTTTTGCT # Right flank : TTTCTACAAACTATGAATATTTTAGGGGATGAGCTGGGGCTGTTGAAGCGCAGTAGGGACAGAACAGAGAATATGATCTTGTTCTGTATCATTGTGCGGCACGCATGTATTAATCACAACTTACCTGTTGTGATTCAACGTGTCAATAAAAAATACAATATGATTTAGATATTATCTGGAAACAGAGAAAATGACAAATCATGCACAAAGATGAAGGTGGATTTTCGACTTTTCAGATGCGCCTTTGTTCTGATAAAAACAGCAAAAGACCTTCGGCCTGCGGGCAGAAGGTCTTTTTTACACCTGTTATCGATAGGATACATCTGACAGGTAAATATTTGCCATATCAATTGGAATGCCGCTGCGTTCGAGGAACAGCTTGACCGTTTCGCGGTCGAGTGGACATTTGGGACCGATGGTGATGCTCTGGATAAACGGACCGCAGGGCGGATCGAACAGAACATCACGGTATGGAACCAGATTATTTTGCCGCAGGCGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCGCACGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.60,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 34920-36416 **** Predicted by CRISPRDetect 2.4 *** >NZ_NHOC01000014.1 Butyricicoccus porcorum strain BB10 BB10_c15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 34920 32 100.0 34 ................................ GTTGTGCAGATATAACAGTATGTGTATTTTTTCT 34986 32 100.0 36 ................................ CATGCAAAACCCTGACCGGCTTCCACGGTTCCAAGC 35054 32 100.0 38 ................................ CTCCCTTGCGTTCCCAATTTTCTACAGTTCTGCGTGGA 35124 32 100.0 35 ................................ CCTAAACGCCATCAAATAGTAATACAAGCGGAGAG 35191 32 100.0 35 ................................ CGTACCCTCCTTCAGGGAATTTCTCAGGGATTCGG 35258 32 100.0 33 ................................ CGAATCCAATACCATTCCTCCATGTTCCTTTCG 35323 32 100.0 33 ................................ TGCATTCTTCGGTTTCATAATCATTCTCCTTTC 35388 32 100.0 35 ................................ CGTTTTTGTGGCGAGGATGAAGTAACCGCAAAGGC 35455 32 100.0 36 ................................ CCAGGTTCTTCTGCCCCGGAAACAACTGCATCCGAC 35523 30 93.8 34 ................-.......-....... CTTCACCGTTGTATGGTTGCTGTACTGATGCGCC 35587 32 100.0 36 ................................ CAATTGCCTGCCGCACACGTTCCACAGTTTTTTCCG 35655 31 96.9 35 ........................-....... CCTGCATTGTGCAGATAACCATTGTGTATTTTTCT 35721 32 100.0 34 ................................ CCGGAACACCGCCCTGCTCCAGCGCCGCAATCCG 35787 32 100.0 34 ................................ CCAATCAAAACTTGAGCCGTTCTGTACGGCATAA 35853 32 100.0 33 ................................ CGGAAGCGAATAATCTGGAAATTGTATTATGAG 35918 32 100.0 35 ................................ CGGCACGCGGTCTTCAACTTTTTGAACGGATTGCC 35985 32 100.0 35 ................................ GGCTTACTGATGTTGAAGTTACAGTAAAGCCCGCA 36052 32 100.0 34 ................................ CAGAGTATTTATCAATTTTATCTTTATTGATTCC 36118 32 100.0 35 ................................ GAGCTTTGTTATCTGCTCGCTGGTTGTTTCTTCCG 36185 32 100.0 35 ................................ CTTGCACGTATCTTCGTGGCAGGCAATTCTGCCAA 36252 31 96.9 35 ........................-....... ATTTCGTACTTCATATAAAACATCCTTTCTCACAT 36318 32 100.0 34 ................................ GCCAGAAAATACAGCGTGAATACCTGATACTGCT 36384 32 93.8 0 .....G.....................A.... | C [36413] ========== ====== ====== ====== ================================ ====================================== ================== 23 32 99.2 35 GAACCAACTCATACCCCTGCGGGGGACGAAAA # Left flank : TCGCTGCTGCAATATTGTCTGCAAGATAGACAATATATGCCAGTGAATCCAGCGGTACAGAAGCCTGCTTCAAATCTCTGGCATGATGATATCGGACACCGTCCAAAATATCCGAATCGGTTACGATATCTTTCAGCAGGCGATAGCCGCTTTCACTGTGTGACCCGGTTTCTCCGGCGCGATATGCCACTTTACCGATATCATGCAACAGACTGCTGAAGGTAATCTTTACTGTTTGATGATTGAAATGCACAGGCAAGCACCTCTCTTTTGCACAAAAATCAACGGGTATATTATAGCAGGATTTATGCAGTTTTTCAACAAAATGTGCGAATATAGTAAAAATCTCCTGAAATTTTTCTGCCATCAGCGCGGTTCGCACTGATTTTTAACGCGTTTTCAGGAGGATTGACAGAAAAACTTGTGTTTGACTTTCAAACTGATTATAATAAAAGACAAGAAACTGCCGGAGAGTTTCATTCTTTTGGGCGATTTCTGCT # Right flank : AAAAGCAGTGGTCTGCCTTGTTTGACAGATCACTGCTTTGCTCTTTTTATGGACTTGTATTACAGTCTTTGATAAATATACTCGTTGCAGGTGTCATAAATGCGGAACAACTTTGGATCGCACAGGTCTGCATAAATTTCCTGTATCAGAGCCTCCAGCTTTTCCACCAGCTTTTTGCTGCCGAAGCCAATGAGGTCATAAATATCTTGCTCTGTAGTATTGTTGAGGGTATGCGCTGCGGCATTTCGCTGGCTCTGGTTGAGCTTTTCCAATGCAGTAAACAGCCTTCCTTCTTCTGTGTCAGCCTTTCCGAGATAAGCCAGCAGTGCGTTACAGAACACAATGCTGATATCAGTATTATCACGGAAAATATTAAAGTGCTGATCCAGATATGTTTCCAGCGCAGGATGCAATGCGCGTATTTTGTCCCGACTGATCAGGACATGGCTCCCTTTGCGTATGGTAATTTGTCCACAGTCAAAGGAACAGATTTGCTTTAA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAACCAACTCATACCCCTGCGGGGGACGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.20,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //