Array 1 8448-7224 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JQHF01000015.1 Neisseria mucosa strain C6A contig_15, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      8447	    36	 100.0	    30	....................................	ACGAATTATAGGCGCGTTTTGGGAATAAGT	
      8381	    36	 100.0	    30	....................................	ACTCCATTCCGTCAAATTGCGGATGGCTAT	
      8315	    36	 100.0	    30	....................................	GTCATGGTTAGGCTATGCTTTGGGTGTCTC	
      8249	    36	 100.0	    30	....................................	AAGTCATAAACTATTTTTATCGTAGCTTGC	
      8183	    36	 100.0	    30	....................................	GGCCTGTTAATAAATTGCCTCTTATATAAG	
      8117	    36	 100.0	    30	....................................	TTATAAGTCAAGAGTTATTTTAATTCTACC	
      8051	    36	 100.0	    30	....................................	TTTATATATCTATCTTCTTATTTTTTTTTC	
      7985	    36	 100.0	    30	....................................	TTGCAAGGCTCACACCTTGCACAGGTGCTA	
      7919	    36	 100.0	    30	....................................	ATATACGCTGGCAACATCAGCAATGACACA	
      7853	    36	 100.0	    30	....................................	AAGCGGTTAAAAAATACCTGCGTAATACAG	
      7787	    36	 100.0	    30	....................................	ACAAAGGAGCTACAAGTAAACAGCTTGGGG	
      7721	    36	 100.0	    30	....................................	TTAATCGGCTCTCATGCACAACAAAATCAG	
      7655	    36	 100.0	    30	....................................	TGATTCCGTTTGAGCAAAACACAGGAATCA	
      7589	    36	 100.0	    30	....................................	TTTGACCGCTTCCGCTAGTCGTTCCATCTT	
      7523	    36	 100.0	    30	....................................	TGACTGGCAAATGCAAGGCTATATGTGGCT	
      7457	    36	 100.0	    30	....................................	AAATCTTCCATCATGCCGCCGCGCGTCATA	
      7391	    36	 100.0	    30	....................................	ATTTCCGCATTTTTCAAATCATCCGCTGAA	
      7325	    36	 100.0	    30	....................................	GCAATAAATCACGAATAAAAAGCAAGCATG	
      7259	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        19	    36	 100.0	    30	GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	                              	       

# Left flank :   AAGGATAATGACATGCGTCATCGTAATGGCAACCGCAAATTAAACCGTACTAGCAGCCACCGCGCTGCGATGCTGCGCAATATGGCGAACTCCTTGTTGACTCACGAAACCATCGTGACAACTTTGCCGAAAGCAAAAGAATTGCGCCGCGTAGTTGAACCCTTGATTACTTTGGGTAAAAAACCATCTTTGGCAAACCGTCGTTTGGCTTTTAACCGCACTCGCGATCGTGATGTTGTAGTTAAATTGTTTGACGAATTGGGTCCACGCTTTGCTGCTCGTAACGGCGGCTATGTTCGTGTACTGAAATACGGTTTCCGTAAAGGTGACAATGCTCCTTTGGCATTGGTTGAATTGGTTGATAAAGCAGCTGATTCTGCTGAATAAGCAAATTGATATGAAAGCACTACCTGTTTAGGTAGTGCTTTTTTCATTTAGGAAGTCTCTATTTTATTTTGCAACGCTACAATTTTATTGTTTCATTCAATGGGGTGAATATA
# Right flank :  ACTCCAACGGGAAATCCTTATTCTATAAGGGTTTCCCGTTTTATTTGGTCTGAAAAAATTGGCTTAGAATAATAATAGTTGGTCGGAATTTACCCTTTTTTCTTGGGTTTTTAGCTCTCCCAACAGCAGTTTCATGGTGGCAAATTGCTTTTCTGTTACTTCCAAACAGCGGATTGAGCCTTCTTGTGGCAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCTCGACCTTTGACAATACGGCTGTATACGGAAAGCTGGAGCATTTGGTATCCATCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTGGCCGCCGTGGTAACAGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGCAAGATTTCAGGCAATTTCAGCTGTTTGGCGTTTTTGTCGGTGATGCTGGCTTGAAATGAAGAAATCATTTTGTCGATAGCGGCCAAGGTG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.90,-0.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.5   Confidence: HIGH] 

# Array family : NA
//