Array 1 388644-388072 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ALIU01000002.1 Pectobacterium brasiliense ICMP 19477 CO10, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
    388643	    27	  89.3	    32	T.........-...C.............	GCTTCGGCTACTTCGTTCTGTTCGACCAGTAA 	C,GA,T [388626,388637,388640]
    388580	    28	 100.0	    32	............................	GCGATAACCAGCAGCACCGGCCACAGCGCGAA 	
    388520	    28	  96.4	    33	..C.........................	ATGCCCCGGTCACGTCCAGACCGGATACAGAAA	
    388459	    28	 100.0	    32	............................	TGTCACAAATCCTGTCACCGTGTTTCCAGAAG 	
    388399	    28	  96.4	    32	...........C................	TGAAAGGTTGCAAAAAGAAGTCTGGCAGGGAA 	
    388339	    28	  89.3	    32	T..T........G...............	AGGCTGAGATTTATTTTCAGGGCTATGACAAT 	
    388279	    28	 100.0	    32	............................	GGAATACTCAGGCTCGCTACGTTTCGGTAATT 	
    388219	    28	  96.4	    32	...........C................	ATGACTGATTTATTGAGCAAAGAAAGGATGGA 	
    388159	    28	  92.9	    32	...........C.....T..........	ACTAGTATCAGCGGGCTTACTAGATCTGTGAT 	
    388099	    28	  75.0	     0	C...........GC......T.C..C.C	|                                	
==========	======	======	======	============================	=================================	==================
        10	    28	  93.6	    32	GTTCACTGCCGTATAGGCAGCTTAGAAA	                                 	       

# Left flank :   TTTATTTCATTGAGTTGAGCATGTAATTTCTGATAGTTAATATCAGCATGCTGCTTTTTAAAATCAAGATGATCTTCTAACCGATAGTCATCATCAACAAGTGTTTTTAAAACCGGATCGTATTTCACAGCATCTCATTCCTTTGAATTTTACTTAAGTCAACGAACTATTTCCCTGTAAGGTTACTTTAACGGAAAAATGATGATTTTTAAATGTTAATAATGCCAAATCCGCAATTTTCCATCCCACACAAAGAAACCCGTTACTTAAAAATGTTACGAGAAAGGGGAATCAAAAATACGTTATTTAAAGGCGATAACGCATCAAACACTGACGATAGTGTTACCTCGATAATAGCCAGATAATGGCGCTTAAAACAGGGGATAAACTGCCTGTACGGCAGTGAACAGCGCGCGTTCTTTGTCCTCTAACCGCACCCATTTCTAAGCTGCCTGTGCGGCAGTGAACATCTGAAACGTGCGTATGGATTCACTGAACGA
# Right flank :  TTATCGAGATGCGTCGCTACCGCGACGCATTATTGAGAGCTATTCCCCGTTGAGGGTGACCACCAGCGAGCGGCTGCCGCCGTGATTGCGGTGCTCGCACAGGTAGATGCCCTGCCAGGTGCCGATGTTCAGGCGTCCGTTGGTGATGGGAATCATTAGACTGTTTCCGAGCAGGCTACCTTTTAGGTGCGCCGGCATGTCGTCGCTACCTTCATATGTATGGCGGTAATACGGCTCGTTCTCCGGCACTAAGCGATTAAAAAAGCTCTCGAAATCCTGCCGCACCGTGGGGTCGGCATTCTCGTTAATCGTTAGCGCCGCCGAGGTGTGTTTGATGAACACCTGCATCAGCCCGACGTTTATCTGGCGCAGTCCAGTAACCTGCGCCAGTATTTCGTCAGTCACCAGATGGAAGCCTCTGGCTTTCGGCTTCAGGCGGATTTCATATTGCATCCACATCGCAGCCCCCTGCTATCAGGCTTCGCGTGCCAAAATCGGCC

# Questionable array : NO	 Score: 5.55
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGTATAGGCAGCTTAGAAA
# Alternate repeat :   GTTCACTGCCGCATAGGCAGCTTAGAAA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.57%AT]
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [10-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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