Array 1 41094-42916 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABURW010000049.1 Lacticaseibacillus rhamnosus strain OSU-PECh-69 k99_434, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 41094 36 100.0 31 .................................... TTTAGAATACGATTATAAGACAGTAGTTTGG 41161 36 100.0 30 .................................... AGTAAGGTAGCCAAATACAACCATAAGGGT 41227 36 100.0 30 .................................... AACTATCTAACACGCTATACACAGAATGGC 41293 36 100.0 30 .................................... TTTAATATGCAGGCGGCGACTGATTTATTT 41359 36 100.0 30 .................................... TGATTTGCGAGATGTCGCGATAAGAAGTCA 41425 36 100.0 30 .................................... GACAACAGACTCCGTCAACATCAGTCTTAA 41491 36 100.0 30 .................................... ATAAACATCGTATGCGAATCGTAACAACGT 41557 36 100.0 30 .................................... AGTTGATTGAGGCGCGGATGTACATTCCTG 41623 36 100.0 30 .................................... CCGTTTTGGTTGCAAAACGAACCGATTACG 41689 36 100.0 30 .................................... AAGGTGTACTGCTTAGCTGACTCCCACGTG 41755 36 100.0 30 .................................... CTCGTGACTTGTCGTGATATGCATACGCGC 41821 36 100.0 30 .................................... GAAAGTTCTTTAAGTTGACCACTCATTTCA 41887 36 100.0 32 .................................... TCAGGGTGCCGGCTACATATACACGACTTTCG 41955 36 100.0 30 .................................... TCTGGAAGCCCGCAATAGTCAATTGAAGCT 42021 36 100.0 30 .................................... AAATGGTTTGAATACCCTTATCCCGCCATT 42087 36 100.0 30 .................................... TAATGACGCTTAACGCTCTCCGGTTGGTCT 42153 36 100.0 30 .................................... AGTCGTGCAAATCCACGTGCGCGCGTTGCA 42219 36 100.0 30 .................................... TTTTATGATGGGCTTGTATTTTCCCAAATA 42285 36 100.0 30 .................................... GGCAATTTTAAAGCCGTGACCGATGCCACG 42351 36 100.0 30 .................................... ATGACGCAGTTGGCGAAACCTTTGCACGTT 42417 36 100.0 30 .................................... TCGCTGACATTGACCATCAACGGCGCCGAG 42483 36 100.0 30 .................................... GCGTGTTAGTCGCTTGTGTGGCTTACCGTT 42549 36 100.0 30 .................................... GCGGCATCTTCAAAATCAAAACGACGCGCA 42615 36 100.0 30 .................................... GTTGACGCGTTGCGCTGTCGCTGGCCGTTG 42681 36 100.0 30 .................................... AAGCAACATATCAATCAAGCCGAAAAAAAG 42747 36 100.0 30 .................................... TGATGACGAAGTGAGTTTGCCCACCGCTTG 42813 36 100.0 30 .................................... ACTCGGGTATTGACAAAGATCGACGCGGCA 42879 36 86.1 0 .......................AA.C....T...G | C,G [42905,42911] ========== ====== ====== ====== ==================================== ================================ ================== 28 36 99.5 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GAGCTGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAAAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAGGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTGCCAACATCAGTCATTATTTAGATGTTGAAAGTCTGAGCAAGCTGTTAGATCAGGTTAAGAACACATCGTTGGAATTACTTCTCATTGAATTTTCAGATGTCGAACGCAGAAAGTTTTTTGAGAAGTGCCAGTATATCTATATTGACAGAGATTTTATGGATAGCCGAGAACTGATTGATTAAGAGGCTGTGTGAAAACACCG # Right flank : GACTCACCTCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCGCCAGTATTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGAAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAACCGTTGAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCTCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTTTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAAGTTGGTACATTTGTATCGCAAAGTCGGTTTTCAGCAGCTACCAGATCGGGAAACGACGATTAATGAGCAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //