Array 1 2576186-2575385 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCHV01000002.1 Streptomyces sp. Z26 scf7180000000008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 2576185 30 96.7 31 .............................A ACGGCTGGCCCTCGGCGGCCGGAGCCACCGA 2576124 30 100.0 31 .............................. ACCGAGGCGTGATCGCAGCGGCCGACGCGGG 2576063 30 96.7 31 .............................G GGGCCGAGCGGATGCAGGAGTGGCGGCGGCT 2576002 30 96.7 31 .............................G TGGGGCGCGCGATGGCCGGTAGCTGCCCACT 2575941 30 96.7 31 .............................G CACTGACATGAAGCCCCCTTGCTGGCCCGTA 2575880 30 100.0 31 .............................. GGCCGAACGGTTCGGCGTGACGCCCAAGACA 2575819 30 100.0 31 .............................. CGACGCCGACCTGATGGTGCTGCTCTCCAGT 2575758 30 93.3 31 ............................TC CGATCACCTACTCCACGGTGTGCCCGTACCC 2575697 30 100.0 31 .............................. CGCCATGCGGGCCGAGGGCGGACGCGCCGCG 2575636 30 93.3 31 ............................AC GAGGCGATCGTCCAGGCGTGCGCGTCGACCT 2575575 30 96.7 10 .............................G CGATCTCGTT Deletion [2575536] 2575535 30 96.7 31 .............................C AAGAGCTCGGTCCCGATCTCCCAGCCCTGCT 2575474 30 96.7 31 .............................C GATGGCAGCGCGAGGTGCGAGAGACGGGCAT 2575413 29 73.3 0 .........-..........TG..CGG.GA | ========== ====== ====== ====== ============================== =============================== ================== 14 30 95.5 29 CTGCTCCCCGCGCACGCGGGGATGGACCCT # Left flank : TCCTGTTGCAGTGGGACGACGAAGGGAACGACCGCCAGGCGTCGTTGGACCTGTTCGACGCTTTTGGTTCACCGGAGAAGACGCTCCACGCCAACATGGGTGGGCATACCGGTGTTCCGGAGTTCGAGGGGGCCGCGGCAGCGCAGTTCTTCAACCGGCACCTGAAGTAGGCCGCTGACAGCGGGTCGGCGGCCGACGACGGCTGATCTCGGCTGACTTACGACTCAGAGTTGGCCCGATCAGCCATCGCGCGGCCACCGTGGGCCCCTGCCGGACTCTCGGCAGGGGCCCGACGCTGCTGCGTTTCCGGGCCTGGTGCGGACGTGAACGACTACGCTCGGGCGCGTGACTGAGTAGGTACGGGGTGCGGTCGCATCGACGGTGAACTCGCCGCGTAGCCCCATCAGTTGGCGTGACGCTTACCGAGGGTCGAAATGTCCGAATCTCCAATAGTTGCTCAAACGGGCTTCTCCGCCGGATAAACGCCCAGGTCAGCAAGA # Right flank : CGTTCCGCGCGGGTGGGGTCGTTGAGCCGGAACGGCCGGGCCCCCGCTACGCGGGGTCCGGGGGCCTCGGGGTGGCGGGGAGGGGGCCGCAGGTGAGGTTGCCCGGGTCGGCCGGGTCGTCGCTGATCCAGAACTGGGTCCACAGCGTGGCGAACTCGGGCCGCGACAGGTGGCCGTCGCCGTCCTGGTCGAGGTGGGTGAAGACGTCGCCCGTCGCCGTGCTCCGGCCGTGCCAGGTGTCGACGAGCCGCTGGTGCTCGGCGCGGGAGATGCGGTGGTCGGCGTTCTCGTCGACCGCGTCGAAGAGGGCGTCGGCGGTGGCGGTGACCGCGTCGCGCATGTCGGGCAGGCGGTCGACCATGGCGAGGATCTCGTCCAGGTCGACGTTGCCGTCGCCGTTCGTGTCGGCGGCGGCGGAGAGGTCTCGCCACCAGCCCAGGACGACGGTGTCCACGCGCGCGGCCAGTTCGGGTTCCGCCGCCACGCGGGGCAGTTCGCGC # Questionable array : NO Score: 5.33 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:-0.14, 8:1, 9:0.44, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGACCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 3367070-3367894 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCHV01000002.1 Streptomyces sp. Z26 scf7180000000008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 3367070 30 93.3 31 ............................AG GTTCGGCAACAGGGGAAAAGTGGGCATGAGC 3367131 30 96.7 31 .............................T CCGCATCGGCCAGCGCCGAGCCCAGCAACTC 3367192 30 100.0 31 .............................. TTCAGGCCGTCGAATCCCTTCGGCGTGACGT 3367253 30 96.7 31 .............................G GGAGCGATCGTGCAGCCACCCGCGCCTGCCC 3367314 30 96.7 32 .............................G CCTCGGTGCGCGTCTTGATGACGCGGTAGTCG 3367376 30 100.0 31 .............................. CCATCCGGGGTCGCGGCGGCAGGGGCCGGGG 3367437 30 100.0 31 .............................. GTGGTGGGACCGGACGGTCTACAAGCACCGC 3367498 30 100.0 31 .............................. GTGGTGGGACCGGACGGTCTACAAGCACCGC 3367559 30 96.7 31 .............................A CCGACTCGCTCACCGCTGGCTCCTAGCCCAC 3367620 30 96.7 31 .............................A CCGACTCGCTCACCGCTGGCTCCTAGCCCAC 3367681 30 96.7 31 .............................A CACCGCGATCCGCGCCCTCATCAGCCAGGCA 3367742 30 96.7 31 .............................T CGTCATCCGATGGTGCGACGAGATCGAGCCC 3367803 30 93.3 31 .......................C....T. CTTACCAGCAGGGTCGCACGACGCCTTGCGG 3367864 30 93.3 0 ...........................TT. | C [3367869] ========== ====== ====== ====== ============================== ================================ ================== 14 30 96.9 31 CTGCTCCCCGCGCACGCGGGGATGGACCCC # Left flank : AGCCCCGGCCACCAACTGCCGTACCTGCCGCGGCAACCAGTGATCCCAGAGCCTCCCGGCCACCGCTCCGCTGTCCGCCATGTGCCGCCACAGAGGCAGCCACGCCCCACTCCGACCGCCCTCACGCTGGTCTGACTTCGCCCACACCTTCCGCGCGGGCGAGGACAACCCCTTGCCCAGCCGGGCGGGATCAGGCCCCTCGTCGTTCATGGAGGGGATTTAATCCTTTGAAAGAGTGACTGTCATGAGAATGCAGGGACTTTGGCTGATAAGTCCTGTTACTCGTTGGTGTGTTGAGGACCCGGGGGCTCTCTACGCGGCCGATTCTCGTGCCTCACGCCGTCCGTCGGGATCGCTCGTTCGGGTGGCATCGCGGGGCCTAGGCTGGGCGTCGCGCGGTGCCAGGCGGTGGCTCGTTCGACGGGGTGGTCGAAATGTCGGAATCTTTGAAAGTTGCTCGGAACGGTCCCCCGGGCCGATAAACCCGCAGGTCAACGAGA # Right flank : CCGTCCGCCCTGGCGCGTCAGCCCGCGCCGCCGTCCAGGAGGTGGTGGTAGCGGAGGCGGAGGGCGCGTTCCGTGCTGGCGGTCAGGGTGACGAGGACGACCGCGATGTTCGTCCACACCGACAGGTGCACCGGTGCGGTGAACGACCCGATGTGCTGGGCGATTTCCGGGGGCTCGGTGAGTTTCTCCGCCACCTGGGAGAGCAGCAGGAGCAGCGCGGTGGTGAGGGCCACGGCCGAGACGCCGCCGATGGCGCGGCTCAGTGTCGGGTGTCGTCGGGCGAGTTGTGCGCGGCGGCCCTCGGCGGAGGCGGGGTCGGGGGTGAGTTGGCGCGCGTGCCCGTCGGCGGTGACGTGGTGGCAGCGTTTCAGGCCGAAGCCGCTCATCGCGACCTCGATGGTGCCGCCCTCGACGGGGAAGACGGCGGGGAGTCGGCATACGGCGCGCTGTCTGCCGTCGACGTACAGTTCCGCGTCGACGTTGCCGGAGCCCTGGTTCTG # Questionable array : NO Score: 5.55 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.44, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 4036091-4036790 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCHV01000002.1 Streptomyces sp. Z26 scf7180000000008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4036091 29 100.0 32 ............................. CACAGGCCGCCACGGGATCACCCCTCACGACC 4036152 29 100.0 32 ............................. ATGGCGTCGACGCCGACTTCGGCGCACGCCGG 4036213 29 100.0 32 ............................. TGATGGTGCTCTGTGACGCGCCAGCTGCGGCG 4036274 29 96.6 32 ............................T TCACCGACCGGGTTAACGGAGACGTGATTGAG 4036335 29 100.0 32 ............................. GTCTTCGGCGAGGTCGTAGGCCGATCCCGCTA 4036396 29 100.0 32 ............................. GTGAAGGTGCGCGGCGTGCCCATGGCCGTCTC 4036457 29 96.6 32 .........................T... ATCCGGGCGGAGTGCGGCCGGTCCGTGCGCAT 4036518 29 93.1 30 ...........A.............T... GTAAGTGTCACTGGTAGGCCGTTTGACGGC 4036577 29 96.6 32 ...T......................... CTCCCGGACCGGCCCCCGCCGGGCGCCCCGCT 4036638 29 100.0 32 ............................. GTCTGGACGCTCGCCTTCGACCGCCCGACACC 4036699 29 96.6 32 .........................C... GGGAGTACGGCGGATCCGGTCGCTCCGTCTTG 4036760 29 89.7 0 ..........TA.............G... | A,C [4036783,4036785] ========== ====== ====== ====== ============================= ================================ ================== 12 29 97.4 32 CTGCTCCCCGCGCCCGCGGGGATGGACCC # Left flank : GGTTGCTGGCAACCATCGAGGCAGGCGTGGTCTTCATGGTCCGCGACGCTGAACGGACCGTCGCCACGATCACGTTGACGCCGGAGGCGGAACAGGGGCTCTGGAGCGAGGCCGAGCTGAAGGAGCCGTCGCTCTTCATCAACAAGCTGACGGTAGCTCGTACGCACGCTGGCCAGAACCTCGGCGGGCGCCTCCTCGACTGGGCGGACGACCGTGCCTACCGCGCGGGCGCGACGTGGCTGCGGCTGGACGCGTGGACCACGAACGAGGCGTTGCAGCGCTACTACCTCGACCACGGCTTCACCCACGTACGAACCGTGCGTGAAGGAGCAGCGATCAACGGCGGCCCTCGCGTCTCCGGCTGGCTTGCCCAACGCAAAACGCAGCCGCAGGAGCACGGGTTCGTTGACCAGACGCCTGACATACGGCCCCTGCTGCCTGACAATGGCAAAGTGAGTAAAAACGCAGGTCGGCGCTGATAAAGATACTGGTCAGCTCCT # Right flank : CCTGCTGTGGCGTTGCTGTTTCCCCCAGGGGTCCCCTGCGGTAGGCGCAGAGCTGGAAAAGCGCAGGTCAGCCGGGTCAGGCTCGGCCCGCTGTAAATCTGCCGGCTTCGCCTTCCCAGGTTCGAATCCTGGCGCCGCCACGCTCCGAGTAGGGCCCGTGACCAGCGACTTCGCTGGACGCGGGCCCTACTTCGTGTCCGAGTGGCGTCGCGTGCGGCTGCCGCCTCCGTGACGTGTGGATCGCCACCATTCCGAGGGCAATCAGTCAACGTGTGTGCTGTGAAGGCCAGTTGCACCATGACGCGCGCGGTGTGCGCCGTACGCCTGGAGCCTGAGGTGCCGAAGATCGCCCCGCGTGCCCTTGGTGTCCAAGCTGGTGCGGTGGGGGAGCGGAACGCGAAACATCAGCCCTTGCCCGGTCCGAGGCGGGGGCCGAAGATGAGGCGTCGGTCCGATGGGGCAGCGGATGCTCAGCGGCGCTCATGGGACGGGGGTCGAAA # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCTGCGGGGATGGACCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 4037355-4037689 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCHV01000002.1 Streptomyces sp. Z26 scf7180000000008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 4037355 30 96.7 31 .............................C GGGCCCGTTTTCGCTGGTCAGACCCCTTGGG 4037416 30 96.7 31 .............................G CCAACATGCTGTGCATGAGCGCGACGGAGAG 4037477 30 100.0 31 .............................. GTGCGAGTGCGAGGCGCCGGTCGGTCAGGTC 4037538 30 96.7 31 .............................C TGACCGGCCACCCCGCCATCAGCATCCCCGC 4037599 30 100.0 31 .............................. GGTAGTGCTCCAGCTCGATTTCGCCGCCGTG 4037660 30 96.7 0 ............................T. | ========== ====== ====== ====== ============================== =============================== ================== 6 30 97.8 31 CTGCTCCCCGCGCACGCGGGGATGGACCCT # Left flank : GGTCAGCCGGGTCAGGCTCGGCCCGCTGTAAATCTGCCGGCTTCGCCTTCCCAGGTTCGAATCCTGGCGCCGCCACGCTCCGAGTAGGGCCCGTGACCAGCGACTTCGCTGGACGCGGGCCCTACTTCGTGTCCGAGTGGCGTCGCGTGCGGCTGCCGCCTCCGTGACGTGTGGATCGCCACCATTCCGAGGGCAATCAGTCAACGTGTGTGCTGTGAAGGCCAGTTGCACCATGACGCGCGCGGTGTGCGCCGTACGCCTGGAGCCTGAGGTGCCGAAGATCGCCCCGCGTGCCCTTGGTGTCCAAGCTGGTGCGGTGGGGGAGCGGAACGCGAAACATCAGCCCTTGCCCGGTCCGAGGCGGGGGCCGAAGATGAGGCGTCGGTCCGATGGGGCAGCGGATGCTCAGCGGCGCTCATGGGACGGGGGTCGAAATGTCTGAATCTCCAATAGTTGCTCAGAACGGCGTCCGCGCCGGATAAAAGGCCAGGTCAGCAAGG # Right flank : TCCGCGCGGGGGCGGGCCGCCGACGATGACGCTGCTCCCCCCCCCCGTACGCGGCCGATCTGCTCCCGTTCCCACGGCTTTCCGTGCGGCGGTGGCTGGGCAAGTGGTGTGCCGGTGGCGGGGGTTCGTGGGGGTTCGGGGTGTGGGGCGGGGTGGTGTGGGGGAAATTTGTGCTGGGGCGGGCATGACGATCCGATAACGGGGCACTCGGATCGCGGCCGGGGGCTCGGAACGAGATGATCAAGGGGCGGGCACATGTCTACCGCGACGCAGGCGCAGGTCCAGGGACGGGTCCAAGGCATCGGGGTGGGCGCTTCCGACGGCGCGCTCGTGGAGCGCGCGTACGTCGCCCCGGCGACGCTCGCGCCGCGGGACGCGCGCGAGGTGGGCAAGGTCTTCTTCGACCGGCTGTCGCGGTTGGAGGAGGGCACGTCCGAGTACAGCTACGTGCGCAACTGCCTCATCGAGATGAACCTCTCCCTCGTGCAGTACGCGGCCAC # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGACCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 5760965-5761298 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCHV01000002.1 Streptomyces sp. Z26 scf7180000000008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5760965 29 100.0 32 ............................. CTGATCGTCCCGACGTCCGCTTCACGGCTCGT 5761026 29 100.0 32 ............................. TCGCCCCGCTCCGCCCGCCGATCGAAGGACCA 5761087 29 96.6 32 ...................G......... GAGCAAACCATGGACGTACGGCAGCTCACCCT 5761148 29 100.0 32 ............................. ATGCCCGCTTCGCCGAGGGATTCGCACAGGCC 5761209 29 100.0 32 ............................. TGATCTTGCGAGGTTCGCGGGGCGGTTCGTCC 5761270 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 99.4 32 GTGCTCTCCGCGCAGGCGGAGGTGAACCG # Left flank : CGCGACGACGTCACAGGCTCCACGCTGCTGCGCGCGCTGGGCGGCATCTGCGGAATGCGTGCCACCGACGGCTGGCTGGTCGAGGCCCGACAGATCACTACCCTCCTCTTCGACGGCCTGCGAAACCGCACCCCACAGTCACCCTGAGCCAAAGGTCCGCACGCCGTAGACCGTCGACCAGACCACGCCCGTCACTACTGCGGACGAGCAGGGTGCGGTGCCTTAAGCGCGGACAGGCGGGCGACGTCCTCGTCCCGGATACGGCTGCTCCAGGCCCCGCTCCTTACCCCACAACCGCGGATCGACCGGACAACAGGGGCCACACACAAGCTCGTTCGCCGACATGCACGCCAGCGCCCCCCACTGACAACAGACCCCGACCAGCCACAGCTCGCCGAAACCAGGCCTACACTCCGCCCATGCCTCACCCCCACGACAGCACCAGACTCCACAACTGCAAAGAGAACGCAAAGCCCCTATAACGGGCCAGGTCAGAAAGG # Right flank : GATCTCGAAGTCGTCGTCGTAGAGCACCGCGCCGTGCGAGTGCCGGGCCGGGCTCGCGGAGGTATGCATCTCCTGGTGAGTGGCGCAGTTCGCCGGTCCGCGGCCAGTAGGCTGTTCGTCATAGGACCGGGGAGGTCAGCGTGGACTATGGCGACAAGCTCTTCTGGCTCTCGGTGGTGATTCAACGCAAGTACGCGCAGATCTGCGCCGAGTTCGACCTGACCCCCTCGCAGGCCACGCTGCTCTGCGCAGTCAGGGACGAGCCGCGGCAGATGGCTGACCTCGCCGCGTCGTTGGGCATGACTAAGAACGCATTGAGCCAGCTGGTCGATCGCACCGCGCGGCGCGAGCTGGTCGGTCGGGAAAGCTCGGCTCAGGACCGACGGGTCGTCATGCTCGGTGTGACGCCCACGGGGAAGGTGCTCGCCGAGGCCGTTTACGCCGAGGTCGCCAAGCGCCTGCCCGAGATCACGAGGAACCTTGACGCTGACGACCAGCGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCAGGCGGAGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGGAGGCGGAGGTGAGCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.80,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 5767489-5767700 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCHV01000002.1 Streptomyces sp. Z26 scf7180000000008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5767489 29 93.1 32 .T.......................A... GTGCTGGCCGGGGCGAACGCCAACCTCGCGGC 5767550 29 93.1 32 .T......................C.... CCGCGGATGGCCGACTGGGCCGAACTGCTGTG 5767611 29 86.2 32 .T........T............A..T.. CCCCACCCCGCGCGCTTGCTCGCGCTCCTCCA 5767672 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 93.1 32 GCGCTCTCCGCGCAGGCGGAGGTGACCCG # Left flank : CATCCCCTCGCTCGACCGCTACCGCCGCAGCCTCCAGGACCCCATCAACATGGCCGCCGAGCTGCGCGAGCGCGGTATCGGTTTCACGTCGCTGCACGAGAACCTGAACAACACCACCCCCGGCGGTCGGCTCGTCTTCCACGTCTTCGCCGCGCTCGCGGAGTTCATCCGCGAACTCATCGTCATCGGCACCAAGGAGGGCCTGGCCGCCGCACGCGCCCGCGGCCGGTTCGGCGGACGCCCCAGCGTCGCCACCGCGGAGATCATCTGCGCCGCGCGCGACCTGCTGCCCGACCCGGGCCGCTCGATCACCTCGATCGCCAAGCTGCTGGGCGTCCCCCTGGGCACCCTCTACAACCACATCCCGGACCTGCGCGAGCTGCGGGCCGGCGCCGTCCCCCCCCTTCAGCTCGAAGCTCCCGCGCGGTAGGCGAATCCGGGGAAGATCAATCTCACCGGCACTTTCTGTACCTCAACTACTCACACCCGGAGTACGTGCA # Right flank : GGTGGGGGCAGGCAAATCAGCCGGCCTCCTCGGCCACCGTCCAGCCGTTCTTGCGCTCCAACGGCGCCAGCAGGCCCCGCATGTACGCGAGTGCCGACTCCCGCGACTCACTCCGCGCGAACCGGCGAGCAAGCCGCTCGTGCAACCCCGCCAACCCGTCCGACCAGCGACGAGCATCAACCTCGGATATCTCCCCACCCATGAACGGATCAACGAGCAAACCCGACAACCATCACGCTAACCACCGTTGCAGTACTAGATCGCGTCGAGTCCCGCGGCGGTGAGGGCGGCGTCGGCCGCGTCGCGCAGGACCGAGGCGTCCATGCTGGCTTCCGTCAGGGCTTCCATGCCGCGCAGGACGGCCAGAAGGTGGTGGGCGGTGCGGCGGGCGTCGCGGTCGGCGGGGATGCCGCCGGCGGCCTGGCCGTTCTCGACCTCGGCCTGCAGCAGCTCAGCGATGGTTGTGAACGTGCGCTGGGCCTTGGCCGCGACCTCGCTGT # Questionable array : NO Score: 3.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGCTCTCCGCGCAGGCGGAGGTGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCTCTCCGCGCAGGCGGAGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.30,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 7 5770482-5770998 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCHV01000002.1 Streptomyces sp. Z26 scf7180000000008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5770482 29 100.0 32 ............................. TGGGATGAGTTCTGCGCGCTGCTCGAACTCCC 5770543 29 100.0 32 ............................. TTACGTGTGGACCAGACGAAGGCTCAACTCTT 5770604 29 100.0 32 ............................. CCGTCACCGCGAAGCAAGCCGAACTCGAACAG 5770665 29 100.0 32 ............................. AACACGGGCGCCCCGGCGCCGGAGCTGCACAT 5770726 29 100.0 32 ............................. TCGCCCAGGCGAACGCCGCCCTCGGCCAAGCC 5770787 29 100.0 32 ............................. GCGCGGTCCGTCAGCAACGCGACCTTGCGGTG 5770848 29 100.0 32 ............................. GTCTTCAAGGTCCGCGGCGGCGTGAAGACCAA 5770909 29 100.0 32 ............................. CCACCGTCCGTGAGGCCGATCTCGCGCCCGCG 5770970 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 9 29 100.0 32 GTGCTCTCCGCGCAGGCGGAGGTGAACCG # Left flank : AGACGGTGCGCGGATCCCGCACCGACGGCCGGGCCGTCCATCTGCTCGCCGCCGCACTGCACACCTGCCGGACCGTGATCGCCCAGCGCCAGATCACCACGAAGAGCAACGAAATCCCCGCCTTCGCCCCGCTGCTGGACCGGATCGACCTGCGCGGCCCCGTCGTCACCGCCGACGCGATGCACACCCAGCGCGTCCATGCCGAACACTTGAAACGCGGACAGGCGGGCGACGTCCTCGTCCCGGATACGGCTGCTCCAGGCCCCGCTCCTTACCCCACAACCGCGGATCGACCGGACAACAGGGGTCACACACAAGCTCGTTCGCCGACATGCACGCCAGCGCCCCCCCCCACTGACAACAGACCCCGACCAGCCACAGCTCGCCGAAACCAGGCCTACACTCCGCTCATGCCTCGCCCCCGCGACGCCCACGACAGCCCCAAACTCCACAACTGCAAAGAGAACGCAAAGCCCCTATAACGGGCCAGGTCAGAAAGG # Right flank : GGCTCCTCTGTGGCCTAGGCGGTGTCTTCAAATGATCACCCGTGATGGATCATGGTGTCGTGATACGTCGTCATGAACTGTCGGATGCCGAGTGGGAGTTCGTCCGGCCGTTGCTGCCCGAGTCGTTGCGGGGCGGAAGCGGTTGGACGATCGCAGGGGGCTGAACGGGATCGTGTGGAAGTTCCGGACGGGGACTGCCTGGCGGGACGTGCCTGAGCGTTACGGGCCTTGGGCCACACTCCATACGCGTTTTCGCAGGTGGGCGGCGGACGGGACGTTCGACCGGATGCTGCGGGCCGCGCAGGTCAAGGCGGACGCGGCGGGCGACATCGAGTGGCTGGTGTCGGTCGATTCCACGGTCGTCCGGGCCCACCAGCATGCGGCGGGGGCTCGAAAAGGGGGCTCCGCGACCCGGCCCTCGGTCGGTCCAGAGGCGGCCTGACCAGCAAGATCCACCTGGCCTGCGATGGCAGGGGCCGTCCGCTCGGCTTCGTTGTCAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCAGGCGGAGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGGAGGCGGAGGTGAGCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.80,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 8 5928897-5929292 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCHV01000002.1 Streptomyces sp. Z26 scf7180000000008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 5928897 30 100.0 31 .............................. ACTCGTACGTGCCGCTGAGCTTGGTGGAGGG 5928958 30 96.7 31 .............................T TCGGCTTCAGGCGGTTGTCGGCGACGGTCCC 5929019 30 100.0 31 .............................. AGCTCTTGCGCGGCGACAACAAGGCAGGCAA 5929080 30 100.0 31 .............................. AGCTCTTGCGCGGCGACAACAAGGCAGGCAA 5929141 30 96.7 31 .............................T GGGCTTGAGGGTGGGGGGTGTCGACCTCGAT 5929202 30 96.7 31 .............................C TGGCCGCCGCCCTCGTCGAGCGGGGCCACAG 5929263 30 76.7 0 .....................C.TC.GGTC | ========== ====== ====== ====== ============================== =============================== ================== 7 30 95.3 31 CTGCTCCCCGCGCACGCGGGGATGGACCCG # Left flank : CCGTGGCTCCCGCCCGTGCGCGTGGTCGGCGGCCACGCCCCACCACCAGCCGATGTGCCAGGTCAGCCACGCGGCGGTCGGCACGGGCACGGGATCGGGCTCGCTGTCGGCCCAGTCCGGCACCCACGTCCCGTCCTCGGCACGGCGTACGGTCCAGCAGAGCGCGGCGGGCTCCCACAGGAAGTCGTCGGGGCCGATCCGCTCCAGGTGGTACTCGAACAGCGACCAGGTCAGGTCGAACTGCCACCGCAGCAGACCGAGTTGCTGCGACGGCGGGCCGGATGCGTCTGGGGGCGTCTCCACGGGGCGACCCTGACACAGCCCCGCCGCACGCGGGTACCGGTTTTCCCCGAGCCCCGCACGGGCCACCGAGCTGGTGCGTACGCTTCGTGGGTCGTGGCGCGCGGGGGTGACCGGTTGGGGGTGGTGGGGAAATGTCCGAATCTCCAATAGTTGCTCAGAAGGCCCCCCGGCCCGCAAGAACGCGCAGGTCACCGAGA # Right flank : CACGGACGGGTGGTCGTCGGTTGGGGCGGCCTACGGGGTTGCCCAGGCGTCGAAAGCGCTCACCCCCCGACCGTACGGCCGGGGGGTGAGACGAGGGGTGCTCTACGGGCTCAGGCGTTGGGGTCGAACGGGATGTCCGACGGCTTCGCCTTGGCCAGGTTGTCCGCGAAGTGGCTGTCCCGGATGGCCAGTTGGGCCGCGCCGAAGTCCGCGCCCATCAGCTTGTCGCGGATGCCCTCGGGGTAGCCGTCCCAGCTGACCAGCGCCGGGCGCTGCCACGCGCCCTTGTGGTTCTCCGGCGGCTCGTCCGCGCTGGCGAAGCGGAACGCGTGGGTGCTGATGCCGTCCTTGTGGTAGACGACCTTCGGGTGGGTCTCCTCCCACGCGATGTCGCCCGCGGCCTTCGTCTCGTAGCCCTTGTGCTGGGACACGGAGACGTACTTGGCCTCGCCCCCGTTCACCCACACCACGACGTGTTCCCAGTCGTGCTTGTGCCCGGC # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //