Array 1 17907-19452 **** Predicted by CRISPRDetect 2.4 *** >NZ_QQTK01000016.1 Limosilactobacillus fermentum strain CECT5716 NODE_16_length_40271_cov_50.0837_ID_31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 17907 36 100.0 36 .................................... GCAATTACCATTTACGACGTTGTAATACTTCTGCTT 17979 36 100.0 39 .................................... TATTGTTCCTCCTTTGCTATGGTATTTTATATGTTCACC 18054 36 100.0 38 .................................... CTAATTGTTCCTCAATTGCTATAACTTCATGCTTGAGT 18128 36 100.0 37 .................................... ATGAATGGCTTGATAATTTGGCCCTTCCCTTGCATCG 18201 36 100.0 36 .................................... CAATTTAAAGCTTGACAAGGTTATAAGCACGGGCTT 18273 36 100.0 35 .................................... CGTCTCCTAACTAATCTTTTGTTCACGTTTCGTGG 18344 36 100.0 37 .................................... TGGAATGTGGTAGAAATTGGCAATCTCCTTCATCTGA 18417 36 100.0 36 .................................... TCATGAATAGCGCTATACAAACCGGGCAACATTAGC 18489 36 100.0 33 .................................... AGCACCTGCTTACGATACCAAATCTTAGTTGGC 18558 36 100.0 36 .................................... TAGTCGTATAAATGCTAGTGCTATTGATAGCAATTA 18630 36 100.0 35 .................................... TGCATGACCGCCTACATATTTCATTTTAATTTCCT 18701 36 100.0 34 .................................... TGTTCCACCTAGCTGTTCTTAGTTTTTCTGGATC 18771 36 100.0 36 .................................... TGCCTAGATCTGTGAAGTCCTGTTCGTAAAACTCAA 18843 36 100.0 34 .................................... TTTGTCTTCAAGTACATTGCCATGTGGGTTGCCG 18913 36 100.0 37 .................................... AACGACTACCAGGATGGTAAGGAAATGATTCAAAAGT 18986 36 100.0 34 .................................... TTTCTAAGATCTTTTTGTAAGCACTAATCATTTT 19056 36 100.0 36 .................................... TAAATCATAGTCGCTTGTATTATGGCTTAATTCTTC 19128 36 100.0 35 .................................... AGGTCGTCCCTTGCCTCCTTAACACTACTACTAAT 19199 36 100.0 36 .................................... AATAAGTGGGCGTATGGTTGTAAGTTACTTAATACA 19271 36 100.0 39 .................................... ATTCTTGATTGTTTGGTTCATTTTGTTTACCCCTTTTCT 19346 36 100.0 35 .................................... GTTTCTTCGTTGATATCTTCGTCGTATCCCCAGCC 19417 36 72.2 0 .....G....A..T....TT......G....T.GTA | ========== ====== ====== ====== ==================================== ======================================= ================== 22 36 98.7 36 GATATAAACTGATCTCCGCCAGAAGGAGACGAAAAC # Left flank : AAACAGTTTTACGAACGGAATTATGCACCAACCTTCCTTTCTGCTTTTCCCTCTAAATACATTCAGGGGAATTACAAAGCACCCATATACCTCGGAGCGGGGAGCGGTCTATGGAGCAAAGTTGACCATCAACATGTTAATATTGAAGGGATTCGACGTCAAACTCCAAGAAAAATGAAGATGAAGTTTAATGGTGCCCTGAAGCTAACCAAGAGCCGGATAGTACGCTATAAGACTCCTAAAAAAGATGGCTTATTTGAACGACACGTTCTCATTATTAATAACGAAAATCTCTACGAAATGGGAAAATGTGGGTTCAAAATCAAGGAATTGTAATTTCAATTCTGAACTAGTTAAGTTATAATATGTAGAGTTAATATTCGAAATTGACAATGTCCAGAAAAAGGGCTAGAGAGGCTTGAATGAGCACCTACCTGGTCGAATTATGGGCATCAAAATGTCAAGTTATCCTTGATTTAGCAAGAAAGTTAGCAGGATCG # Right flank : AAAAAGCGAGAGCGTGTATCGAAATCCTTAGATTTCAATACACGCTCTCTTTAGATTTAGGGGCCAAGAAAGCTCGTTGCAGTAGACTAGATATATAATTTATAATTGACGTATAGGTTATATTCGAGAGAAAGAAATTAACACCAAATGAAATAGTAGGATGTTGATTTATCGGCAGGTCCTTACTTCGGGAGGGGTAAAGGGTGAAGAATATAGTTTATGTGGAGAATGAATGTTTTGTTGGTGTCACTAAAGAAGGGTTAAAATTTTCAAATATCAAGACAAAGGAAAAGAAGTATCTGACCTTTGATGATATCGGTACGTTAGTGTTTGATAATAGAAAGTGTTATCTATCGGAGCGAGTGATTGAATATTGCATTCTCAATCACATTGGAATTTTATTCTGTGACCGAAGCCACTCTCCTTTAGAAATGATTGAGACCACCTACAATCAGGAACACCGCTATGAACGCTTGAAAAAGCAACTAACCTTAACTAGT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATATAAACTGATCTCCGCCAGAAGGAGACGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.60,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //