Array 1 125374-124139 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_SQKW01000169.1 Escherichia coli strain LTSIAB78 NODE_2631_length_160816_cov_48.542583, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                           	Insertion/Deletion
==========	======	======	======	=============================	==========================================	==================
    125373	    29	 100.0	    39	.............................	GTGAACGTGACAACGCCCGCGACAGAAACGTNNNNNNNN   	
    125305	    29	  93.1	    32	NN...........................	AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG          	
    125244	    29	 100.0	    32	.............................	GCTGGCGCACCTTACGCAAAAATAGACGTAAA          	
    125183	    29	 100.0	    32	.............................	GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC          	
    125122	    29	 100.0	    32	.............................	ACGACTGAATCCGGCGAGGCTATCAACTGGCC          	
    125061	    29	 100.0	    32	.............................	CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG          	
    125000	    29	 100.0	    32	.............................	GCGATCGTATTTTCCGCTACGTCGCTCAAATG          	
    124939	    29	 100.0	    40	.............................	GCTGCCGCGCTTTCGGTGTGGGAGCAGTATNNNNNNNNNN  	
    124870	    29	 100.0	    38	.............................	TCGTTGATGGTGTGATGAGTGTACAAAAANNNNNNNNN    	
    124803	    29	  96.6	    32	N............................	CCGCACACGTCGAGCTGGTGGGGATTAATGCT          	
    124742	    29	 100.0	    42	.............................	CAGGGTAACTGGCTGCTCCTCAACCATTCCGCNNNNNNNNNN	
    124671	    29	 100.0	    32	.............................	TTGGTATTAACGGGAATGTAGTCACTCCAGGA          	
    124610	    29	 100.0	    37	.............................	AAATTAATTTCGAAACGGGCGTTGATGGTGNNNNNNN     	
    124544	    29	  89.7	    37	NNN..........................	GTGACCATAAGGGCATTTCATACTGCCTNNNNNNNNN     	
    124478	    29	  93.1	    32	N.......C....................	GGGTTTTAGCGACCGGACCAGAGTACGCAACA          	
    124417	    29	  96.6	    32	........C....................	TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT          	
    124356	    29	  96.6	    38	........C....................	GGAGTGATGAATTGGAAGTAACGGATAACCNNNNNNNN    	
    124289	    29	  93.1	    32	NN...........................	CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA          	
    124228	    29	  96.6	    32	............................C	TCTGTGTATTCGCTACCAGCCAGCACCGGTAC          	
    124167	    29	 100.0	     0	.............................	|                                         	
==========	======	======	======	=============================	==========================================	==================
        20	    29	  97.8	    35	GTGTTCCCTGCGCCAGCGGGGATAAACCG	                                          	       

# Left flank :   GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT
# Right flank :  GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC

# Questionable array : NO	 Score: 6.15
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCTGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [5,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-5.80,-11.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [8-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.55   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//