Array 1 50004-50642 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWFZ01000040.1 Streptomyces sp. SID8382 SID8382.c42, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 50004 29 100.0 32 ............................. GCGACCACGGTGATCTCCTTGGGCACGGTCCC 50065 29 100.0 32 ............................. TTGGCCGCATGCCGGACCAGGCGCATCTGCGT 50126 29 93.1 32 ...T.............C........... TGGACCGTCTACGACGAGCTGTTCATGGAGCT 50187 29 96.6 32 ........T.................... GATCGACCAAGGGCGCGACTGCGTGGCCCTGA 50248 29 96.6 32 ...T......................... TGGAACCTGAGCATCGACCTGCGGGCGCAGGG 50309 29 96.6 32 ...............A............. GTCGCCCAGTCCATCGCCGCCAACGGCCCCTT 50370 29 100.0 32 ............................. GTGTTCAAGGGCATGGTCGGCATAGTCGACGC 50431 29 89.7 32 ...T............T......C..... GATGCTCACTCCCAGCTCGCCGGGCTCGACGG 50492 29 86.2 33 ...G.G.......T..T............ CAACGTCACGCACGGATCGCACTGGATGAACAC 50554 29 89.7 32 ..A........G..............T.. TACACGATCAGCGTCATGGCCACGATGCCCGC 50615 28 89.7 0 .....-....T...........C...... | ========== ====== ====== ====== ============================= ================================= ================== 11 29 94.4 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : TGGTGGGCACTCTTGCCGACGTCCAGGCCCAGGAACACGCCCACGTCTTCGGTGTCGGACATCGCACCCTTCCAGGAGTGTTGAACGTGCTGGCCACGGCAGTGGTGTCGTACGCGCGCATCCACGTTATGCAGACCTGCCGCCCGCGGACTGTCCGGCGTTGCGCCGGACCGGACGGTGGCCGGACCTCTGATCAGCGTCTCCGACGGCACCTCCCAGGCCCGGCGGCACCACCCCCCAGGTCATGCCTTCGACAGGGGGCAAAAGTCATACCGGGCCCGGAGGCCAGCGGCCCCATTGCGGGACCGCGAAAAACATAACGGGGAGAGAGAGACGCGACTGGGGTGCTGGGGGCCTCATGTTCTTGCGAAATGATTTGGACGGTGTCGAAGCCGAAGATTTTACGGTGTGGACCCCGAAGGTATATGCCTGGAATGCCGGACTTTGTGAAAGTGCTTCGTGGAGAACCTGCTGCCAGATAGACATGCAGGTCACGGAGT # Right flank : CGCGTGGAACGATAAGGTCATTGCCGAGTCCGTAAGGTTCCATATATGTGGCGTTGGGGCCCTCAACGACACTCAAGCGGTGTTCACGGTCGCCCTTGCTCGGGGCCAGGCTCTCCAGGGTCGGTTCTTCAAGCCTCAACTTGCTCAACCTTCAGCAGGGGGCAAACGGACAAGGCCAGTGCTTGGGTGGTAGGTGACGCGTCCTTCGGGGCCGCGGATGCAGGAGCCTGTCGGGGACAGGACGAGGGTCGCACGGTGGTGTACCGCGGAGTGAGGAAGCGGCTGCCACGTGTCTAGCGGCGGTAACGGGTTGTCGCCATGGAACCAGGAGTGGGGGATGGCGAGTGTGTTTCCCAGCAGGGCGCGCTGCTGAGCACGGTGGGCGGCACGGGTCTCCTCGGTCTCTTGTGCTCGGTGATCGCGCAGATCGGCCGGGAAGTCTCCTGCGGCGTCGTATGTCAGCTCGCCGTCGTCTTGTTGGTAGAGCAGGATGGCGTCGA # Questionable array : NO Score: 5.43 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 59044-62397 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWFZ01000040.1 Streptomyces sp. SID8382 SID8382.c42, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================= ================== 59044 29 75.9 32 A..T.......TTGA.T............ GCCAACCCCGATTCCATGCGGTCCTCCCTCGT 59105 29 96.6 32 ...........G................. AGCAACCGACGCGCCAGCCTCCCGAGGAACTG 59166 29 93.1 32 ......T...T.................. GGACGTAACGGCGTCCGTGCCGAGGTGGGTAG 59227 29 96.6 32 ..A.......................... CGCGACACTGCCAAGGTCATCGGGATCGGTGA 59288 29 96.6 32 ..............T.............. TGTCCGGACGGGTACAGCCTCCGGGCGCCGTC 59349 29 100.0 32 ............................. AGATGGGCCAGGTGATCCTGTGTCGCCCGTTT 59410 29 96.6 32 ................T............ CACAAACCCACCAAACGCCGCCCCACCCGCCC 59471 29 96.6 32 ........T.................... ATCTACGTACACATGGGATTTGCGGGCCTGGC 59532 29 100.0 32 ............................. ATGGGGACACCAGCCGTGCCAGATGTCCATGC 59593 29 93.1 32 .........................CG.. TGTGCCGCGACCTCCAGACCGGGCCCGTCCTC 59654 29 100.0 32 ............................. CCCACTCCGGCTCCGATGCCGGGCCGGCTGCC 59715 29 100.0 32 ............................. TCGTGCAACGTCCGCGCGCGGTACTCCGATTC 59776 29 100.0 32 ............................. CTCAGCGAGGCGGCCGCCGCCATCCGGGGCCA 59837 29 100.0 32 ............................. CCGAGCCGGTCCGTCTGGGGTTGCGTGTCAAG 59898 29 96.6 32 .......................A..... ACGACGGTGATGTCCGGTTGGTCCATGCCCGT 59959 29 100.0 32 ............................. GACAGCTTCGAGATCGGATGGTCGATCGGTGT 60020 29 100.0 32 ............................. TCGACATCACGCCCGCACCGCTTCCCAACACG 60081 29 96.6 32 ..................A.......... CCCGACGCGTTCACCGGAGGGCATGACAAGTC 60142 29 100.0 32 ............................. GAGACGAGACCACAAACCCCAGCCCTGACGTG 60203 29 100.0 32 ............................. GGCGCCGCCGCCCTCCCCGAGGGCCATGTCGT 60264 29 96.6 32 ..............T.............. ACCGATCAGAGCATCACCCTCACGCTGCGGAA 60325 29 96.6 32 ..............T.............. GGACGGAAGGAAAGCCCCCTCGCGACCGCGAA 60386 29 100.0 32 ............................. CCTCCGGGCGGTCGACCAGCAGCGTGTCCTCG 60447 29 100.0 32 ............................. GTGGCATCGGCGATGGCCAGTCCCATACGGGA 60508 29 96.6 32 ......T...................... TGCCCGTGCGGCGGGGAGGGTCACGGCACTGA 60569 29 100.0 32 ............................. CCTGCATCAAGCAGGGCCTGCGCCAGGAAGAT 60630 29 100.0 32 ............................. TCAAACCCCACCCCTGAACAGTGCGCTCGGTT 60691 29 100.0 32 ............................. GCGCGTCCAGCGCTCCACGTCGGCCGGCTCGT 60752 29 96.6 32 .......T..................... AACAAGGGCGGGGCCAAGAAAAGCACCCTCGC 60813 29 100.0 28 ............................. CCGACGCGCGGCCGGTGGGCCGGACCTT 60870 29 89.7 32 GAT.......................... GCCACTACGTCGTACGTCTCCAGGGCGTTACG G [60872] 60932 29 100.0 32 ............................. AGCTACGACTTCCACCTCGGCCGCACGATCGG 60993 29 93.1 32 ...................C........T ACCGGCGGTACGTGATTCCGAACGCGGGTCGG 61054 29 100.0 32 ............................. GACTCTGGCGCCAGCGTGGTGTGCCCCCGCAT 61115 29 100.0 32 ............................. CCGGTGGGCTGGAAGCTCATCCCGTACGAAGA 61176 29 100.0 32 ............................. GCGATGTCCTCCACCCGGACCGAGGTGACTGC 61237 29 100.0 32 ............................. CTCAAGGGGTCGGGCCAGTCGCTCTCACCCTG 61298 29 100.0 32 ............................. AGCCTGGGCCACACCCGACCGAGAGGAAATCC 61359 29 100.0 32 ............................. GCAGCGTCAACCTTTGGCCGGAGCTATCAGTC 61420 29 100.0 32 ............................. GTGGGGGTGCCGGTAGTTTCGGGTCATGCCCG 61481 29 100.0 32 ............................. GACCCGTTGGGGTCCGGGCACATGCCCCAGAA 61542 29 100.0 65 ............................. AGGCCGTCCGCCTGACCACGGCTGACCAGGTCCAGAATGGTGAGGTTGTCCCGGTCGACCTGGTC 61636 29 100.0 32 ............................. CCGGCGCCGGTGAAGGCCAGTTCGTCGGCGTA 61697 29 100.0 32 ............................. GCGGCGCCGGCGCCGAACGCGGCTGTCATGAC 61758 29 100.0 32 ............................. ACCTTGAGCGCCTGGCGGGCTGTGAGCGCGGC 61819 29 96.6 31 ..........T.................. CCCACTGCCCCAACGGCATCCCCACCGGATA 61879 29 96.6 32 ..........T.................. TCCAGCGGAGGCGGCTACCGTGATGACTGACG 61940 29 96.6 32 ..........T.................. TCCAGCGGAGGCGGCTACCGTGATGACTGACG 62001 29 100.0 32 ............................. AGCGACCGGCTCGTGCAAGTGATCAAAGCCGT 62062 29 96.6 32 ..............T.............. GCCACGCGCACGACGACGGCCAGGAGCTCGCC 62123 29 93.1 32 .........................C.T. AGCCGTCTTCCGGGGGAGTGGGTCGCCCCCAT 62184 29 79.3 32 .......G...G..T......G..A...G ACCATGTACTACACGGATCGTGTCCCGACGAC C [62187] 62246 28 75.9 32 ......TG.....TG.T........-.G. TTGGGGGCCGCGAGCGAGGCGTTGTCCGGAAG 62306 29 82.8 31 G..T.....A....G.............A GCTACAAGGCGCGGTGACTGGAGACTGTCAA A,C [62322,62331] 62368 29 79.3 0 .......T....GTG....T......G.. | A [62392] ========== ====== ====== ====== ============================= ================================================================= ================== 55 29 96.4 33 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CTCGAAGACATCGCGGTCCTGCCCATCGACATGCACATCCAGCAAGGCGAGACCTTCACCTTCCGCACCGTGGTCAACCCGGCCCGCGAACGCCAGGTTTGGAAGGAGACTCCGCAGGGCCGCCAGCTCACCCGCCAAAGGCTCGCCGACACCACCCCCAAGCACGCCCGCGAATGGTTCGCCGACCGCCTCCAGCCCGAGGGCGCCGAACCCGTTGGCCGCGCCGGCATCCGCCGAATCGGCGCCACCGGCGACACATCCACCATGGCTGTCCGCATCCTCCCCAAACTCACCTTCGGCGAGCGCCACCGTGGCCAGAAACTCGGTCGCGCCGAAATTCGCGGCGCTCTCACCGTCACCGACCCCGACGCTTTCACCCATGCCCTGGCCAACGGCATCGGCCGCGCCCGTGCGTACAGCTCCGGCCTGATTCTGGTCCGGCGGCAGGGCGGCGATGGGGGCAGAGCGTGATGTACGAGTGGGTCCAGCAGCGGATCGAT # Right flank : CTCCGTCCGGCAGAAAACAAGAAGTGGAGGCAATCATCCTGTCGGCCGATCAGAAGGAGAGTGTATCCGTCGTTTGGTGACTAGCATACGGATGCTTTGGGAATGGGCTTGGCTATGACTTCGCAACTCGCAGAGTGGGCCTGGAAGACGGCGAAGGCGGAACTGGAGTCAACTTTGCCGCGACGCTGGGCACACTCGCTTGGTGTGGCCGCAAGGGCGGTGGAACTTGCTCCCTTGCTTGGCGATTCGGCAGGGCTCCTGCGTGCGGCAGCAGTTCTGCATGACATTGGGTATTCACCTGGGCTCGTGGCAACCGGGTTCCATCCGCTTGACGGTGCCCGGTTCCTCCGTGACGTGCATGGTGCTGATGAGCGGCTGGTGCGGTTGGTGGCGAATCACTCGTTTGCATTGTTGGAGGCCGAAGAGCGTGGCTTGAGGGAAACACTGGAGGAGGAGTTTCCGCTGCTTGACGATCCGCTGCTGGTGGACGCTCTCGTGTG # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.83, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [18-31] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 66512-64196 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWFZ01000417.1 Streptomyces sp. SID8382 SID8382.c447, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 66511 29 100.0 37 ............................. TACGGCCGGAGCTCAGGCCAGGCGACCGGCCGCCGCG 66445 29 100.0 37 ............................. ACGCGGGCAGGTCCGGTCTGGATCTGCGCGATGGCTG 66379 29 100.0 36 ............................. ACCGCCTTGTGCGACCGCGATGTCACGGGGGCGCTG 66314 29 100.0 37 ............................. AGGAAACCCTCACCCGCACCGAACAGCAGACCCTCGC 66248 29 100.0 36 ............................. GCGCGGGAGATCTTCTGGAGCGGCTTCCAGCTCACC 66183 29 100.0 36 ............................. ACGTAGCCGCCCCTTCGGGCACACAGCGCCTTGTAC 66118 29 100.0 35 ............................. GTGATTCCGGGGCGTATCGCCGAGTGGTTCGGGCG 66054 29 96.6 36 ..........................G.. CACGAGGGCGACTACGTGGTGCTGCACTTCGAGGAC 65989 29 100.0 37 ............................. ATGCCGAGGGCGCGGACCGTACGCGCTACCACCACGT 65923 29 100.0 37 ............................. GCGCCAGCACGTCAGCTGGGCCGATCCGGGCCGCCAG 65857 29 100.0 39 ............................. GTTCCCAGATCCTGGACCCCCAGGTCCGGGCCGTCGCGG 65789 29 100.0 35 ............................. GCGGTCCTGTGGCCGCGGCAGCAGCCATCTACGGC 65725 29 100.0 37 ............................. GGCTACTGGAGCTGTACCGGCTGCACGCCGACACCGG 65659 29 100.0 36 ............................. GAGCTGAAGGTGGCGCCGTCCGGGCTGACCGGTAAG 65594 29 100.0 35 ............................. TGGCCGCTTATTTCCCGTTCACGACGGCCGTGGGA 65530 29 100.0 35 ............................. TTGATGAAACCAATGCGGAGGAACTGTCCGGCCGC 65466 29 100.0 37 ............................. AACAGCTTCTGCCGACGGCACCGGGACAGGCACCGGA 65400 29 100.0 38 ............................. AGCACCCGCCCAACGACAACGGCCCCCGGCATCCGCAC 65333 29 100.0 36 ............................. TGCGCGGCACGCCTGCACTGGGACAGGTATGACCGC 65268 29 100.0 36 ............................. CCACCTACGACGTTCCGTCGGCCGTCGTCCTGTCGT 65203 29 100.0 36 ............................. CCACCTACGACGTTCCGTCGGCCGTCGTCCTGTCGT 65138 29 100.0 36 ............................. CCGACCACCTACGGGGTCTGCCCGCTGACTGGCCGT 65073 29 100.0 35 ............................. TCGACTACGACCCGCAGGGCCACCTGAGCGAACAG 65009 29 100.0 36 ............................. GTGTACGAGGAGTAGAGGTCAGGCATCAGGCCCCCT 64944 29 96.6 36 ........T.................... AACGCTGCGGGCGGTGTGAGGCCGGATGCCACGCGG 64879 28 93.1 37 .......................T-.... TTGATCACTTGCGGTTAGGTGGCCCGCTCCCCCTGGT 64814 29 100.0 37 ............................. GGGCGTGACCGCTGTGCGCGGTGGCCCGGTGCTCCTC 64748 29 100.0 36 ............................. ACCAGCGCCCGGCAGCCCCAGCAAGCACCGGTCCAG 64683 29 100.0 35 ............................. TGGCACCAGTCACCGCGCCGAACGTGTTCATGGCC 64619 29 100.0 40 ............................. CGGTGCACGGCCTGGACCCGCAGGTCGCCGAGGTGGTCCA 64550 29 100.0 36 ............................. TGCCGCAGCCGGGTTACTACCCGCGCCCGGGGTGGG 64485 29 100.0 35 ............................. ATCTGGCTTGCGTCCGCGTTTGGCGAAATACGCGG 64421 29 100.0 37 ............................. ACCGTCAAGCCCTTCCGCCGGCCCGCGGGGTTCTCCC 64355 29 96.6 36 ..................A.......... CCGCCGGGTGGACCGACACCGATGTCTGGCAGGCGG 64290 29 100.0 37 ............................. GCGAGGTCGGCTTGGCGCGCCCGGGTCGCTTCCTCGG 64224 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================== ================== 36 29 99.5 36 GTCCTCATCAGCCCTGGAGGGCTGGCAAC # Left flank : CGACGACCGTCTACCACCGCACGCTCAAGCGCAAAGTCAGCTACGAGGAACTCATCCACCTCGAAGCCCTCAAGATCGTCCGCCTGTGCCTCGAAGACAAGCCGTACAAGCCCTTCCGCCCCTGGTGGTGATCAGCATCTTCGTGATCCTCGTCTACGACACCGCCGTCGAACGCAACCCCAAGGTGCTCAAGACCTGCCGCAAGTACCTCCACTGGACACAACGCAGCGTCTTCCAGGGCGAACTCTCCACTGCCCAGTACCGCGCGCTCATGGCCACTTTGAACACCACCATCGACCCCGAGTACGACAGCATCGTGACCTACACAGCCAGGTCCCCGGACATGATCGAGTCCAGTACCCTCGGAGTCGCCCTGGGCGGCCCCGGCGACATCCTGTGAACCGCTCTGACCTGCACAGATGCACTACCGCCGGATCGCTGCAAAACGACGCCCACAGACGCGAGGGTTTCGCTTTCTGACCTGCGACTTTACCGTCGGG # Right flank : ATAGCGATGGAGCCGAGCAGCTGCATGGCCGGTCTCGCGTTTTCATCAGCTTGACTCTGTCGGGGATCTTGGAGTTGCCGAGGTTAGCTGCCCAGGGTTCGCCAGGATTTCAGCCGGGGAATCTCGCGCTGGTCGAGGTAGCCCTGGAAGGCAGTCGGTCGACGGGGGATGGGGGGTTCCTCGGTCGGTTGTAGTCCGCTGAGGTGTTCGATGTTCACGGCGATGGCTGTCAGGACGTGCTGGATGTGGGCCTTTCCCTGTCCTCGGTAGCGGCAGCGTCGCATGCCGTGCCCGTGGGCGAACTCGTTGACCATGCTCTCCACTCCGGAGCGGACCGCGTAGCGGGCCTTCCACTCGGGCGTTTGTTGCTCGGTGCGGACGCGGAGTTGCAGGTCGCGGAGCTCTCGTGGGGGGGAAGCCCACGGTGCGGGCGTTGTCGGCGGTACTGGTGCACTGGGTGCGGGCAGGGCAGGGACGGCACTGGCGCTTGGTGAACCGTG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCAGCCCTGGAGGGCTGGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 75007-76159 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWFZ01000417.1 Streptomyces sp. SID8382 SID8382.c447, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 75007 29 96.6 34 ...........................C. TCGGCGTAGAGGCGGTCCCACCAGTCGGTGGTGG 75070 29 96.6 41 ...........................C. TTGGGGGACCCACTCAGTGACACGACAGCGCGCCCTGACAC 75140 29 89.7 38 ....C......................CG TACCGCCGGACCGCTGGCGGCCGGAGGATCTGCCACAC 75207 29 100.0 37 ............................. TGAACGAGGCCATGGGCGTATGGATCGGGGTGACCGG 75273 29 100.0 36 ............................. CTGCGCCGTGCGGTGAGCTGTGTGAAAGCCCCGGAG 75338 29 96.6 36 ...................A......... ACCACCTCTTGCTCGTGCTGCGTCACGCCGACTGGT 75403 29 96.6 34 ......................C...... ACGATGCCCACGAGTGGCTGTGCTGGCACGACAC 75466 29 96.6 38 ..................A.......... AAGTGCAATGCGCCAAAGACGAGTTGTGGGACCCCCGG 75533 29 100.0 36 ............................. ACGGGCTGGGCCGTCACAGCCAGGCCTGCAAGCTCG 75598 29 100.0 41 ............................. GTCATCCGCCCGGCCAGCAGCTCCCCCGACAGCCGGTCGGG 75668 29 100.0 37 ............................. CGCTCCGACATTCACGCCCGCCGCGCCCAGCGGCCCG 75734 28 96.6 37 ..................-.......... ACGTCCCCCGCGGTCGAGGGCCGGGCGCCGTACCGGC 75799 29 96.6 37 .....................A....... ATCACCGTGGGGTGCACGGGTCCTGTCGCCTCTGCCA 75865 29 100.0 36 ............................. GCGGTGAGCTTGATGATCTCGTCCATGATGGATCTC 75930 29 96.6 39 ....................A........ CTCTGGCTCGGCCCGTTCCCACGCGACGGCCGTGGTCTC 75998 29 93.1 40 ....C....G................... ACCTCACCGAGGCGGACATCTGGATCCGGATCGCCTCGCG 76067 29 89.7 36 C................T...A....... GGACACGTCTGAGCATGGCAGACACAGCGCCTGCCT 76132 28 72.4 0 ......-G..G.....CT...A...A..A | ========== ====== ====== ====== ============================= ========================================= ================== 18 29 95.4 37 GCCGTCATCACCCCTGGAGGGGTCGCAAC # Left flank : CCCGCCACCCTTCGTCATGCAGCGACTGAGCCATCGCGGCATCGTGACTGCCAAGCAACTCATACATCACCGCCCGCGCTGGCCCATGCACCTCCTCCCACCGCAGACTCGGCCGATCCGGCTCGACATCCACCCTGATCCGCATCACACCCCCAACGACTCCGCCAACGACCCTGCCGCTCTGCTGACACAGCGACCAGCCCGGACAGGACAGGACCCTAGCCGAGCAAAGGGAGGTAAGGTGCGAAAATCCATAAAGTATCTTGAAACGCCTTCGTCGGGGCTATACAACGCACTCGTCAAAGCTCCACCGACGTGTTGCCGCCAGTGGAACCGAACCCGCAAACTAGCGGGCACCACTGACAACAACCCCCGCACGGCGTGTAGTGCTCCCATGGCTCAACGCCCTGACCTGCTCTGATGCACTACTGTCGGGTCGCTGCAAAATCCGCCCGGGAACGCCACAGGAAGACAGCTCCGACCTGTGGCTTTACCCTCGG # Right flank : AGTGGACAACGCGACGACCGCCAACAAGGTCTCGGGGTGACATCAATCCAGCAATATTCACAACGCCGACGCGGTGCTCTCAGTGCCGCTCGTCTTAACACTCCACCCACCAAGCGAGCAGGGGAAATAACGGAACGCTTAAGTAGGTGGAAACCCTCTAGGGCTGATTAAATACCCAGCAGCGCACGCCGAGCCAGAATGCTGTTGCGATCCCTCCAGGGCATGGACACCTGCGTTATCCCATACCGCAGCCGCGCCCGCCGTTGGCGGATCATGGAATTTACAAGAACCCGGACAGAGACGTCAAATGGGAGCGATAAATCGACCTGCAGCCGATCAAGGAGGCAGCGCTCTACAACATCTGCGGCCACTCCTCGAAAATCTGATCGCATACAGCAGGGCTAGATAGCAGGACGGCCCGCCGACTGAGCGGGGCTCCGATCATGCAGGCATCCCCTTACCTTTCAGCCCCTCCTCGCCTCGCACAGGCAAGGGACTGT # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGTCATCACCCCTGGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.60,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //