Array 1 32-423 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKGX01000127.1 Acinetobacter ursingii strain TUM15093 sequence127, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 32 28 96.4 32 .C.......................... TTTAACAGCTATATGGCATGACGATTTAAAAA 92 28 100.0 32 ............................ TTTAACAGCTATATGGCATGACGATTTAAAAA 152 28 100.0 32 ............................ ATTTTGTCCATTGCCTTACGAATTTCGGCAAG 212 28 100.0 32 ............................ AGAGAATTAAGAACGAGTGCTGAAGTGTATCA 272 28 96.4 32 ..........G................. GCAACGAACAGTTAGAGAGCAAATGCTCACGG 332 28 89.3 32 .C........G................G ATTGGAAATGGACAAGTTTCAGAAGTGGCGCG AGAT [350] 396 28 78.6 0 A.........G........A....TTT. | ========== ====== ====== ====== ============================ ================================ ================== 7 28 94.4 32 GTTTCCTATCACATAGATAGTTTAGAAA # Left flank : CGTGGCGCATCGACCAACTCTGGCGAATATGG # Right flank : ATTTCCGTGATTCCAAGCATTTTGTTTTTAATTGCTGCATCGCTAAAGGATCCATCGGTGCAGTCATCATGGCCCGATAAGCCAAACATTCCTGCGTTTCTTCTGTTGCTTGAGATTTGGCATTCAAGCTATGACATCCCATCAGTCCCAAAGAGAAAATACATCCTACAATACATTTGATGACCATTGGATTTTCTATAAATAAGTATTTGCCGATATCAACTCCAATTTTAAAACGCAAAACAGCAAATAGAAACCATTGAATAGACATGTTTCATAAGTCCCTGTCATTTTTGCCTATGGAAGAAAAATAAAGAGGGTTTAAACAATGATGAAAGACGTCATAGTGTATAGATCTTTTAAAATTCGCTTATTTTCTTAAAATCTTCTGCCAATATATAAGCATTTTAAAAAGATGAGCTTAATACAATGACAAATCCAGATATTCAAAAGGTAGAACTCGCAAAAGCCTATCGTTTACTTAATCATGGTCCAACTGT # Questionable array : NO Score: 5.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCTATCACATAGATAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.08%AT] # Reference repeat match prediction: F [matched GCTTCCTATCACATAGATAGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 46468-44518 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKGX01000004.1 Acinetobacter ursingii strain TUM15093 sequence004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 46467 30 93.3 30 ............................CA AAATAGTCAAAGCTTAAACTTTGTCCGGAC 46407 30 93.3 30 ............................TG CTGCTGAAGAAGAAAACAGAAAATCAATTC 46347 30 93.3 30 ............................TG ACAGATTGTCAGGTTTAGCAAAAAAGAACC 46287 30 96.7 30 ............................G. AGATTATTCACAATCCATGCCCCCCTCTGT 46227 30 96.7 30 ............................T. GCAGATAGTTCACGCCTTTTGCGTGAATGT 46167 30 96.7 30 .............................A TGAAGTGACCACACTCATTCGCCAAGACGG 46107 30 93.3 31 ............................CA TATTTTTTTGCAGAATTTAACAGAAGTGAAC 46046 30 93.3 30 ............................TC TTTGATTAATTCGTCTCGTTCTTGGTCTAT 45986 30 100.0 30 .............................. TAACAGCATTATTAATATCATTTAGAAAGT 45926 30 100.0 30 .............................. CACCAGAAGTATTAGACGAATTTAAAATCG 45866 30 93.3 30 ............................TG TATGAATCCACAGTCCTTGATACACATAAA 45806 30 96.7 30 .............................C TTTCCGCCTGCTGCTGTTAGCGCTTTGGTC 45746 30 96.7 30 .............................G ACTTGAGATAAGCCATCCGTTAAACCACTC 45686 30 96.7 30 .............................C GATGTTGGTCGTATTCGTGGATTAATTTCA 45626 30 93.3 30 ............................TA AATTGGCTCTTTTCACCGCAATTTCAAATC 45566 30 93.3 30 ............................TA ATGTTGGTAACACTTTTAAAACATCATGTA 45506 29 93.3 29 ........................-...T. TCTCCATCGATGAATGCCAAGTACAATGC 45448 30 96.7 30 ............................T. AATTTTGGGGTATTGCTACCCTATAAATCA 45388 30 96.7 30 .............................A AGCAGAGCCTTGTACACCAGATTGCACAAA 45328 30 93.3 31 ............................CC ATTGATGATGTCGTTTTGGATAAAAATCAGA 45267 30 96.7 30 .............................C ACAGGTGTTTTAAAAATTCATGCAGGTCCA 45207 30 100.0 30 .............................. TAGCTGAAAATGAAAATGAAGAAAAATCAA 45147 30 93.3 30 ............................TC CATCGCTTTAGATTTATCCACCGATGTTGC 45087 30 93.3 30 ............................GC CAGATCTATACCCAACGCCGCAGCAGCTTT 45027 30 96.7 30 ............................G. CTGAATGTGTCGCTTAATGTTTCTTAGTGT 44967 30 100.0 30 .............................. ATCTTCGATGTAATAGAGAAGCGCAACTTC 44907 30 93.3 30 ............................CG AACAGACTTGTCAACTTTATTTAGCTAGTA 44847 30 100.0 30 .............................. AAGTATTAATCATGGCTTCTGCTGACATTT 44787 30 93.3 30 ..........A.................T. TACGCTTGATGAGATCAATAGTTGGGTCAG 44727 30 93.3 30 ..........A..................G ACCCATTTAGCAGAGAAGAAATGAATACCC 44667 30 93.3 30 ..........A..................G TTACTCGGATGCTTCCCGTTCTAACGCATA 44607 30 93.3 30 ..........A.................T. GTACCTATTCACCAAATTACGTCAGACGAC 44547 30 90.0 0 ..........A.................TG | ========== ====== ====== ====== ============================== =============================== ================== 33 30 95.2 30 GTTCATGGCGGCATACGCCATTTAGAAAAT # Left flank : TGGAGCAACTGAATCTAACTCATTGGTTAGCAAGGCTGCAAGATTATGTACATATCTTATCTGCTCGTAAAGTTCCTGAGGATAAGGTCAACGGATATGCTACTTATTTTAAAGTTAATCCAAAATTGACTGTTGAGCAGCGTGTTATTCATCAGGCAAAACGTCGTGGAATCTCAATTGAAGAAGCACAGCAACACTTTAAAGCATTGGATTTGACAGAGACTTTTGAACCTTATATCAATATGAAAAGCCAAACCAATGATATGAACTTCCGTTTGATTATTGGAAAAAAACGTGTTGATGAAGCAAATATTGGAAAATTTGGAAGCTATGGATTAAGTCGTACATCTACAGTACCCGATTTTTAACCCAATATTTTTCACACTCTTTAACAGCTTAATAAAATCAATAAGTTATAACTTTGCTTTGAAACTTTGGGTATTTCATACTTTTTAGGGATAAAGCACTGTTATAACTTTATTTTTTGCTTTATTCTTACT # Right flank : CAAACGACGTGTAAGAGGTTAAGCTGATTAGTTCACTTGAGTAGAATATGGAATCTAACTGATCGTAAAAATGACTTAAAAAAGAAATAATGTAAACAAAAACGCACTGCTTCTGGCGAAACAGTGCGTTAGGTTAATAAGATTATGCTGGTAAGTCAAACCAGATCATTTCACTATCTTCAAGTGCATGAATCGTAGTTTTCTCATCAAACAATAAAGCATCACCTGCTTTAACAATTTGATTCTCAATCATAATTTGACCTTTAATCACATGCACATAATTGTGCTTTTGAGTTGCAGCAATCTCAAGTGTTTTACCAGCTTCTAACACAGCCGCTTTCACTTCTGCATTTTGGCGAATATGCATAGCAGCATTATCATTTGGTCCTGCAATCAAGTGCCATTGGTTTGGCTGTTCACTTGGATCAAGTTTGATTTGTTGATACGTTGGTTCAGCATCGCGTACATTTGGATGAATCCAGATTTGAAATAGATGCACT # Questionable array : NO Score: 5.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.20, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //