Array 1 40861-45774 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCOM01000002.1 Kocuria rhizophila strain TA68 NODE_2_length_93898_cov_13.6628_ID_3332, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 40861 28 100.0 34 ............................ CCCTGGGGCGGCGCGGGTGATGCCGTTGTCCACG 40923 28 100.0 33 ............................ GGATGCGGACTACACCGTGTTCATCCTGCTCAT 40984 28 100.0 33 ............................ CGCGTCAGCCTTGTTCACCAGCAGGGTGGTGTA 41045 28 100.0 33 ............................ CATCTCCCGTGCTCTCCGTCCCACGTGTTCGCA 41106 28 100.0 33 ............................ CCAGGTCCCGGGCCATGACCCGCAGGTTATCCC 41167 28 100.0 33 ............................ GTGCAAGTTCGCGGACCCCGAGATGCGAGCCAA 41228 28 100.0 33 ............................ CGGGCGGGCTGGCATCTTGTTCGTGCCCGCCTG 41289 28 100.0 33 ............................ CTGTGCACGGCGCATGTAGAATCGGTCATAGCC 41350 28 100.0 33 ............................ CTGGTACGTGCTCACCGACGTGGACTTGTACCG 41411 28 100.0 34 ............................ CTTCACCTGTAGGTACTGCGGAGCGAAAGCCCCA 41473 28 100.0 33 ............................ CGGGAAAGAGATCGCGGCCATGTGGCAAGGGTG 41534 28 100.0 33 ............................ CTGTGCCCACTGGGACGGCATCGCCCCGGCGTT 41595 28 100.0 33 ............................ CGCCATGTCGAGGGTTTGGGTGGCTTTGTCGGA 41656 28 100.0 33 ............................ CAGGGCGTACGTGCTGGACCTGTACAACCCGGC 41717 28 100.0 33 ............................ TCTCGCGCAGCTCGTCCTTCTTCAGGTACGCGG 41778 28 100.0 33 ............................ CTAGTGGCCGCAACGTACGACTACGACCAATGG 41839 28 100.0 33 ............................ GGGTGCCGGTGCGGGCAGCACGGTCACCCAGGC 41900 28 100.0 33 ............................ GGTTACGGCCCATCTGGTCCAGGTTCGCCTCAG 41961 28 100.0 33 ............................ GTCCCGGAAAAACATCGCCGCCGCCTTCGACGG 42022 28 100.0 33 ............................ GGTGACCGCGTCGGGCCAGAAGGCATTGGAGGC 42083 28 100.0 33 ............................ GCCTGGAAGTCAGCCATGGTCTAGTTCCTGTCC 42144 28 100.0 33 ............................ CATCATGCTCCCACCATGGCACGCCACACGCGA 42205 28 100.0 33 ............................ GTACGCGCAACATCACCGTTCTCAAACTGGATA 42266 28 100.0 33 ............................ CGTGACGGGGGCGATGTCCGCGGAGATCGTGCG 42327 28 100.0 33 ............................ CCCATCGTGCATGTCGCGGACGTGGGTGGACCC 42388 28 100.0 34 ............................ CTTCCTCGCGGACACCGCAGACATCTGGGGTCCG 42450 28 100.0 33 ............................ CGTGCCGGTGAGGTAGTTGTTCTTCCCGTTGAG 42511 28 100.0 33 ............................ GTCATCCGGCAGGGTCACACGGGCGTCATCCCC 42572 28 100.0 33 ............................ CAGCGACACGGTCAAGATGTTCTGGACGGTCAA 42633 28 100.0 33 ............................ GAAGAAGCCCACGATGGCCGGGACCCGATCCTG 42694 28 100.0 33 ............................ CTCGGGTGGTGGGACCGCGCAGTGGGGTGTGTA 42755 28 100.0 33 ............................ CTTCACCCCGTCACCCGCCTCACGTGCACCTCG 42816 28 100.0 33 ............................ CCGACGCCGAGCTCTTCGCCAGCAGACACGGCC 42877 28 100.0 33 ............................ CGGGGTCTCGTGGACGATCGGGAGGAGCCCCCC 42938 28 100.0 33 ............................ CTGATGGGCTCCTTCACGGCATCCTTCAGCTTG 42999 28 100.0 33 ............................ CGCCGGGAACGTCGAGGCATGGCCCAAGTTCGT 43060 28 100.0 33 ............................ GGAGACCTCCGCGGATCATGAACGTATCCGCGA 43121 28 100.0 33 ............................ GGCGGGCACGGCGCAGGCGGCGGCGGACGGGAA 43182 28 100.0 33 ............................ GTTGCTCGCCCTGTCTGGGAGGAACCCGTCATG 43243 28 100.0 33 ............................ CTTCTTGGGGTCCTTGCCAGCGGCGATGTAGTT 43304 28 100.0 33 ............................ GCACTTCGGGGGGCTGGGCATCTCTGGCCAGGA 43365 28 100.0 33 ............................ CGCGGACGCCAGATCGAGGGCGTACCCCGTGAC 43426 28 100.0 33 ............................ GATCCTTCTCCGCCTGAGCAATCGCCTCCCGAC 43487 28 100.0 33 ............................ GCTCCCCAACACGGCCCTGGTGTTGGCTGTGCA 43548 28 100.0 33 ............................ CCCCGTGTCCACCAGCCACGACGGCTTCCCGAA 43609 28 100.0 33 ............................ AACGATGCGGGGTCGGCGTCTCGGGCGATCAAC 43670 28 100.0 33 ............................ CCGCCACCGCACACGAGACTGCTCACGGTCGGC 43731 28 100.0 33 ............................ CGGCAACTCCACCTCCGTGACGATCCACAGGTC 43792 28 100.0 33 ............................ GACACCATCGCCCGGTGGATCAACCCCGCCACC 43853 28 100.0 33 ............................ CCACGAAGGAGAACTGACCATGGCAGCACAGGC 43914 28 100.0 33 ............................ GGAGAACTTCGCGGAGGGCTTCTTCCGGTCCGT 43975 28 100.0 33 ............................ GTTGCCCGGCACACGGGCGGTCTTCACGGTGCC 44036 28 100.0 33 ............................ GGGCGCGGGGCACAAGGCGCGTGCGGCGACTGT 44097 28 100.0 33 ............................ TCGGCTGATGGCCGTCGACAGGTTCGCGAGCGC 44158 28 100.0 33 ............................ GCCCTGCCAGCGCATCGACGTCGCCGACGAGGC 44219 28 100.0 33 ............................ GTGGGAGCCCTCCGCGTCGAACTGGGCGCGGGT 44280 28 100.0 33 ............................ CAACCCGCCGCGAAGTCCCACGAGCGGGCTGAG 44341 28 100.0 33 ............................ GCCCAGCGCGTTCGTCGTGCTGCTGGCGCTAGC 44402 28 100.0 33 ............................ GCCCAGCGCGTTCGTCGTGCTGCTGGCGCTAGC 44463 28 100.0 33 ............................ CGTGGACGCCGAGCCCGAAGACCTCGAGGAGTT 44524 28 100.0 33 ............................ GGCGGCCTCGGTGGTCATGACCACGGGCGCGGT 44585 28 100.0 33 ............................ GATCAACGACTTCTGGAAGGGCGACGACATCAA 44646 28 100.0 33 ............................ CGCGTCCTTCAGCAGTCCCAAACCGGCCTTGAA 44707 28 100.0 33 ............................ GGCGGGGATGGACAAGCCTGGTGGGGGTCTGCC 44768 28 100.0 33 ............................ CGGTCACGGGCTTCTTGCGGTACGTCTTGGGTT 44829 28 96.4 33 .G.......................... GCGGTGGACGGGCAGGTGCAGCTGCAGCTGCCG 44890 28 100.0 33 ............................ CCGCAGGGCAACCTGGTCGTTCTCGGCCAGGCT 44951 28 100.0 33 ............................ TGCCCCGGATGCGGCGGGCGGGGTCCCTGGCCC 45012 28 100.0 33 ............................ CTGGTCAGAGAGCGGAGATACGAGGATCACGGT 45073 28 100.0 33 ............................ CGAGCGGAACTCGGCGGCGGCTTCCAGCGGCGA 45134 28 100.0 33 ............................ GTCCGTGGCGCCGTGCAGCGCCCCGCCCTGGAA 45195 28 100.0 34 ............................ CGCCCTACCCACCTCGGGGCGGGACAGCGCTGCG 45257 28 100.0 33 ............................ GACGGTGCTCTCCAACACCTAGGCCGGGATTAA 45318 28 100.0 33 ............................ GCTCGGCCCCGGCGTCCTCACCATCGGGGACAG 45379 28 100.0 33 ............................ CTTCCGGGCTTCCTCCAGGGTCTCCCACTCGGT 45440 28 100.0 33 ............................ CGGAGCGCCGGGGGACTCACAGAACTCGAACGC 45501 28 100.0 33 ............................ CCTCCCCTCCCTGCCCCGCGGCAAGAGTTCAAA 45562 28 100.0 33 ............................ CCGTTGCCGGTCACGTTCCGTCAACGGCTCCCC 45623 28 100.0 33 ............................ GAGACCACCGCCGCGCTCGCGGCGATCCGCCCG 45684 28 100.0 34 ............................ CGGCGGGGGCGGTTTCGGCTTGGCCGTCGAGCTG 45746 28 89.3 0 .....................T...A.A | C [45769] ========== ====== ====== ====== ============================ ================================== ================== 81 28 99.8 33 GTGCTCCCCGCGCCTGCGGGGATGAGCC # Left flank : CGACGACGCCATGTCGCTGTGGTCTGGTCGGCGTGAAGGCCGCATGCCGACGGGGCAGAACTTCTCTCGGGAGGACTCATGATCGTCTTGGTCCTCTCAGCCTGCCCGGTAGGGCTCCGTGGGGATCTGACGAAATGGCTGTACGAAGTCTCTGCCGGGGTTTTCGTAGGTAAAGTCAGTGCGCGGATTCGGGAGCACCTGTGGGAGCGAGTGCTGGAGTCATCTGGCTCGGGGCGGGCCATCCTTGTATGGAATGCCAGGGGAGAGCAGGGCTTGACGTTCTCTGTCAAGGACCACCACTGGGACCCAGTGGATCTCGATGGGTTGACCCTGATGAAACGCCCCTCGCGCACCAAGCCCCGATCTTCTCCCGAGCTCAGGCCGGGGTGGAGCAAAGCCGGTGCCCGTCGCAGGTTCGGCGACAAAAAGACCTGACCGCAAAAGTGTCGAAGTCAAAGGAAAAACACCCCTCGGGGGACAATAACCCCTAGTCACCAAGT # Right flank : ACGGCCGGGACAAAACGGCGAGTTCCTCTTCCATTTAGTTGTGGACAACTAAAAATTGCACAACTATAATCAGTCGCGGTCGGGTCGCGTGGCACCCGCCCTGGTCTTGCCAGCCGAGCATCCAGGGTGGCCAGTAACGAGGGGCAGCGAAAAATCTGCACCCGTTTGCGGCATCGATGTCGGCGGGTCTCGGCACTTGGGGGGTCGAGGCCCGTCAGGATCACCAGTGAAAAGGAGTCGTCATGAACGTTCTGCACACCTCCGGTCGTCCTTTCCGGCGCAGTGCGCGGGCGGAAAACCCCGCCGCGCTCTCCCCCGCCCGCCACATCGTCCGCACGGCCCTCGGCGGCTTCCTGGCCTTCGCCGGCGTCAGCCACCTGACCTTCGCCCGTGACGAGTTCCAGGCCCAGGTTCCGAACTTCGTGCCCCTGGACACGGACGTCACCGTCCTCGCGTCCGGTGTGGTGGAGATTGCGCTGGGTGCCTCGCTGATCGCCGCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCTGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGTGCGGGGATGAGCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //