Array 1 230458-231195 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTLI01000004.1 Parabacteroides sp. AM17-47 AM17-47.Scaf4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 230458 47 68.1 29 AAG..T.AG.AT...T...A...........C....CAA.......T CTTGGGGCGAATGGTGACGGTTGGCTTGC A [230469] 230535 47 95.7 30 ...........T...T............................... CACACGCTGGCCGTTCACATAACCCGTGTC 230612 47 97.9 30 ......G........................................ TGATTGCTCCCAGTCCCTTTTTCGTAGTGT 230689 47 100.0 30 ............................................... TAAGAAATTCAATCATTTCAGTGATAGCAT 230766 47 100.0 29 ............................................... GTCATTAAGCAATTTCCACAGGTCGTAAG 230842 47 100.0 30 ............................................... CTCCTTATCACGACCATCCTCACGAATATT 230919 47 100.0 29 ............................................... ACGTTGACTGTTATAATCGAGAGAACCGA 230995 47 100.0 30 ............................................... ATAATGGTAAAAAGGTATTGGATAAAATAC 231072 47 100.0 30 ............................................... ATAATGGTAAAAAGGTATTGGATAAAATAC 231149 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 10 47 96.2 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGATCCATTGGAAACAGC # Left flank : ACCCGTGGGGGATTCGTCTGGGGCTGTCGTACAAGCAGGTTCAAGAGAATGCGTCGTTTACCGGAGTGCTCACAGCTAAGCACTTCATTTATCAGCTCATCCTGTTTATCATATAGCCATTCGTTTTCCTTGGTCGAGAAATGGCTACAGACCCATAACGCTTGATAACTAACGGCATCATCCGGATCGAATATCAGATCGTATAGCTCTGCTTTCCGTTCTTGGTTCCCTTGTACATAAAATAATATCTCATGGATATCCTCTATATGACAGCGGCTTGATAGTCTCTCTTTTAGGTCCATTCTCAATCTTTGTTGTTGTCTCTTTATCTTTTCTGCCGTAAAGTTATAGTCTTTTTAGCAAAGTTTCCCTAGTTCACTTACTTTTGTGCCCCATTGATAAAAGAATGGATAGATATGCGATATATGAATTTATTAAATGATTTAACAATTGATTGTAAAAATAACGGAGGGTGTTACCGAGTAAAGGATCAGTTGAAG # Right flank : CTTAATCTGTATTATATGCTGTATATCAACTAGATGATAGAATGGTTAGAAAATAAAAAAGAAAAGTTTCCAATGTAATAAATCCCGTTTTATGACGGGATTTATTATTTCTAGAAAAGCTCTAATTGTTGGCCGGGTGTATTAGGAGGTTGTACTTTTTTCCCATAGAACAACTCAATATTCCCAAATTGTTTGTCTGTAATGCACATTATTCCTATTTGCCCGTGTTCTGGTAAAAATGATTTTACTCGTTTTATGTGTACTTCTGCATTTTCTTGGCTGGCGCAATGTCGCACATAAATAGAGAACTGAAACATGGTAAAGCCATCACGCTGCAGATTCTTACGGAAATCACTATAAGCTTTCTTTTCTTTTTTTGTTTCCGTAGGTAAGTCAAATAATACCAACACCCACATAATACGATATTCGCTAAATCGATCCATGATTATTACCGTTCTGGATACACGATTCTTCGTTGCTCTCCACTGAAACATTTGTAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGATCCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.10,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.05 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //