Array 1 283943-281179 **** Predicted by CRISPRDetect 2.4 *** >NC_018719.1 Candidatus Nitrososphaera gargensis Ga9.2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 283942 37 100.0 39 ..................................... TTTATTCTTCTTTTAGGAGCTTGATCAGTCGCTTCATCT 283866 37 100.0 40 ..................................... TCCAGTTGCCCGCCTTGCGATCTGTACCAGACACCAAAGC 283789 37 100.0 37 ..................................... GGACATACATGCCAGCCCAAGTGGCTTCGGCCATGGC 283715 37 100.0 38 ..................................... TCAGGGGACGCTTGCGACATACGCAGGAACATGGATTC 283640 37 100.0 40 ..................................... AGATTGTAGACGACTTGTTCCTTGGTGAGAGCGGGCCCTG 283563 37 100.0 39 ..................................... ATTCCGTTTGTACTTGTTGACATTCAAATACTGGCTCCT 283487 37 100.0 40 ..................................... GCTGATACGCAAACAGGAACGCCATGACCTCATGGTCGTT 283410 37 100.0 37 ..................................... CTTTGTTTCTTTTGGTCAGAAAGCGGAGTTTAATACA 283336 37 100.0 33 ..................................... GATAGGTCAGCACTCAGCACTCTGCCGTTCTGC 283266 37 100.0 40 ..................................... CCTATATCTATTATCTATGTCTATTCCGTTTGTACTTGTT 283189 37 100.0 41 ..................................... TGGTGCCAAGCGTGGCCTGGCAGGGATAGCCTGGCTACCAG 283111 37 100.0 39 ..................................... CCTATGTGGTTGAGCGAATCCCACCGTTTCAGGAGTCTT 283035 37 100.0 41 ..................................... ACCGTATAGTCGGTGACATCAACTGTTTCTCTTGCCTTCTT 282957 37 100.0 41 ..................................... GATTACAATAACATGAAAGTCGTTTACTCCGACGTTAACGA 282879 37 100.0 35 ..................................... TTGACTGGGAGGCCCATCTAGCAGTATTGAACAAG 282807 37 100.0 38 ..................................... GGGAAAATCGTAGAGCAGGAAGCAAACAAGACATTCAG 282732 37 100.0 40 ..................................... AAGGGCTTGAATTTGTCGCCGACTGATACCCACACAAGCA 282655 37 100.0 38 ..................................... CGCCTGACACGTTCCTAAAGGCGCTCCTGTCTGTCAAC 282580 37 100.0 37 ..................................... ATGTTGGCGTCGTTTTCGATGGAGTCACGTATGGTAC 282506 37 100.0 41 ..................................... AAATAATACGACGCTGCTGCTCTTTTTTCACTGTCGTATCT 282428 37 100.0 39 ..................................... CTTACATGCAAGTCATCAAGCTTATGGACATGGAAACAA 282352 37 100.0 42 ..................................... GCCCATACTGGATTCATGGGCCTAGGGTTCTTGGCATCGCTC 282273 37 100.0 36 ..................................... TGCTATGCCCACATAGTGGTAAACACTGTTTTGTAA 282200 37 100.0 40 ..................................... CAGAATATCTCACTCATGTAGTTGCGCCTTTCTCCAATAC 282123 37 100.0 40 ..................................... AGGTTTGCCTATCTCGTAAAAGCTAACTGCATAAATGCCC 282046 37 100.0 41 ..................................... GTAAATGTTGCCATACATCTTGCGCATCTTTTTGTAGTATT 281968 37 100.0 40 ..................................... TGCACCACGCCGTTTTTCTCTGGCGAAAATTCCATATTGA 281891 37 100.0 36 ..................................... AAGTACCAGTCGCGGGTAATGACCTCTAACACATAA 281818 37 100.0 39 ..................................... AGGAACTTCAAACATCTTAACAAAGTGCATGAACGTCTA 281742 37 100.0 41 ..................................... CTTATCTCCCGGGGATTGTAGCCCGATAGCCAGAGGTTGTA 281664 37 100.0 40 ..................................... TTTGTTGCATGCGCTCATTTACCTGGTTGCTGACGCTTTG 281587 37 100.0 37 ..................................... GCACCTACGCGGAACAACGGCATGAACCAGACAGAGA 281513 37 100.0 39 ..................................... AGTATACATGCAGTAAATGTAAACTCATATTTTCATCTG 281437 37 100.0 36 ..................................... TACCTAGCCAATCTGGCGGTATTACAATGCCAGTCA 281364 37 100.0 38 ..................................... CATTCATCTTTGAGCGTTAGAATTGCAAGAAATCTGTA 281289 37 100.0 37 ..................................... GATATTCAGAATAGTTTGTTTCTCGTGCCTTCAAAAT 281215 37 97.3 0 ....................................T | ========== ====== ====== ====== ===================================== ========================================== ================== 37 37 99.9 39 GTTAAAACGCGAATCTCCAAATAGTGGAGATTGAAAG # Left flank : AACGCCTTTTATTCCATCTATCCTTCTGACAAAGACATCTCGCCCTGATTGGCAGTACTGGCTTGCGACCTCATACACTCCTAATTTGATGGTATCATATGGCGGCTCGATAGGAGGTTTGTCCCAGTTCCATCCTCTCAAACTCTCGTCTACCGTCATGGTCCTTCCGCGGGAGACTATTCCTTTGAATAGCCTTCTTCGGTCTTCGCCTGAAAGAAAATACACGATAGTATGATTACAGCATTAAATATTTTAACTTTCCATAGTAAAAAAATAGAATAACAATAATCGGCTGAGGATTCAATTAAAAATGAGGTATTTCACCAGTATAATACAACTATTTTATGTCATTTGTTCAATAGTTCGCTGGTTTGCTCTAATTCAAACCAGACGCCGATTATCTTTATAAGAATGGATGCGAATTAGACTTAATCGGTTCCAAACTATCTGAGAAGCATAATTCGTGCTCGGTTTAACTAAAAGAGCCGAAAAAGTGCCCT # Right flank : ATGGTTGCTCTAGCATCTTGTTGAAGATTAGATCAGCTAGCTGTTAGTCTCCAATAGAGAGTCATAGGTATCTCTGTAAAACGCTGATAGCTCTGTCTATGCCAAGATCCAAAAAGTAGTTGCCTATCCTCGGACCCCTGTCGGCGTTAAGGAACATCCGATAGAGCAGGGTAAAGAACTCTTTTGGCTCCATGCCGTTGTTCCTTGCAACATCAAACACCTTTGACTGTAACTCTTTGGCGTTGTCAGGGGTGCTCTGCATGCCTGCAAAAGGCTTGATCGCCTCTATCAGGTCGATAATGGCCTTTCTTTGCGCATCGGAGAGCTTGATGTCAAACTTTTCTTCCCGAGCCATATTGTCGTCAGCCCAGTTGGACGCTAACCTTATCTTTTGCATGATAGCGTCGGTCTTGTCTTTTGCAATGTTGTAGGTCACAAGCCTGTTAAAGATCTTGTCGTACCTGTCCTCCTCGCCAGACGGGAAAATGGCGGCCTGCTGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAACGCGAATCTCCAAATAGTGGAGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.80,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //