Array 1 6549-5851 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_RPBU01000060.1 Cronobacter muytjensii strain SD83 C545, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
      6548	    29	 100.0	    32	.............................	GGCGCCGGTAATCCAGAGCGCCGCGAGCGCAT	
      6487	    29	 100.0	    32	.............................	GTTGATAACCCGGCTGAAATCTTCGACGGCAT	
      6426	    29	 100.0	    32	.............................	CCGGCGACGTTTTGCTCGATACGCTGGTTAAA	
      6365	    29	 100.0	    32	.............................	CTGACGTCGGAGTGTAGTCATTGCCGAGTTTA	
      6304	    29	 100.0	    32	.............................	TTCCATACATGTTGTCTTATAGTGATACAGTC	
      6243	    29	 100.0	    32	.............................	ATCCAACCCCGCATCAGAATCACCATCTACGC	
      6182	    29	 100.0	    32	.............................	ACAGCGCAGGGCTCTCTCAGGCAATTGGCGCA	
      6121	    29	 100.0	    32	.............................	TTACCCCTCTTGGGAGTGATACGGATCTTTGT	
      6060	    29	 100.0	    32	.............................	ACGATCCGGCAGGTGCAAAAGCTGTAGGCGGC	
      5999	    29	  89.7	    31	.........................C.GA	CTGCCAATCCCGGCAGCCTGCCATCCCCCAT 	
      5939	    29	 100.0	    31	.............................	TCATAAACGGGCGCGCCGGGATTAACTCCCA 	
      5879	    29	  82.8	     0	.........A.C.......AA.......A	|                               	
==========	======	======	======	=============================	================================	==================
        12	    29	  97.7	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   ACGAAAGCTTTAAATGGATGATGGCGCACAACATTGCTTTTATTGTCGCCAATATCAACATCAACTACCGACGACCCGCAGTGCTGGGCGATCTGCTGACTATCACCAGCGAGATAAAACAGCTTAACGGCAAAAGCGGCGTGCTGAGTCAGGTGATTACGCTTGCGCCTGAAGGCGAGGTGGTTGCCGATGCGCTCATCACGTTCGTGTGTGTCGATCTGAACACGCAGAAAGCGCTGCCAATTGAAGGCGAGCTGCGCGAAAAACTGGAAAACATCACAGGCTAAATTCTGCAATCACGCCGCCTGTGCATGCAGTGATGGATTTCTCTCCGTTAAAGGCGAACAATCCGGTAGATGTTATCGGCCCGGAAGCACCGTAAAAAAATGTTTTTAAAATCAACAGGGCAGCCGCTCTTTAACAAGATGGGTTGTGATGTAAATGTTGGTAGGTTGTGGCGGGCGATAAAAAGGTAAATAAAACAAAGTATTGTCTTTAGA
# Right flank :  GAACAGGGCGGTGAGTAGAGGCCAGAGAATACGCGCCCTCTGGCCCCCCACATTCTTCAGCGGCGTTTATACTTCAAAGCCAACGTAAAATTTCGCAACACTGCGCAACAAAGGAGAGACGATGCGGGTACACCATCTTAACTGCGGTTGTATGTGTCCTTTGGGCGGCGCGCTGTATGACGGCTTCAGCAAAGGGCTGCACGCGCATCTTATTTGCCACTGCCTGCTGATTGAAACCCAAAACGACGGGCTGGTACTGGTGGATACCGGCTTTGGTCGCGACGATATGCGCCATCCTGGCCGTCGGTTGCCGCTGTTTTTTCGGGCGCTGAACAATATCCAGTACCGTGAATCATTAACGGCGTTGCAACATGTTAAAGCGCTCGGCTTTAAGCCGGAGGATGTACGACATATCGTGCTGACGCATCTCGATTTTGACCACGCAGGCGGTATCAGCGATTTCCCGCATGCGCAGGTGCATCTGATGCAACAGGAGATCA

# Questionable array : NO	 Score: 6.15
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [8-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [38.3-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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