Array 1 190296-185106 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMCP01000004.1 Testudinibacter aquarius strain DSM 28140 Ga0244705_104, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 190295 28 100.0 32 ............................ TTGCAGTATAACGCCGCAGTTAAGCAGTTAAA 190235 28 100.0 32 ............................ TATGCGCGCGTATGAAAACATGTTTTTTCACG 190175 28 100.0 32 ............................ TTGCGGTATTGTATTCCTCGCACTGTCGATCA 190115 28 100.0 32 ............................ TCGGCACAACAGCGCACGCTCTCGCCGAATTC 190055 28 100.0 32 ............................ AATAAAGGCGAAAAACCCGAACGGCTTACGCC 189995 28 100.0 32 ............................ TTAAATTCTAAATTGGAGCAACAGGGCGTAGT 189935 28 100.0 32 ............................ CAAGGCTTTGAACTTACACGCTTATAAATCCA 189875 28 100.0 32 ............................ TCAATGCCTGAACAGACTGAGCCGTAAGTGAA 189815 28 100.0 32 ............................ ACCACTAAAAATGGCGTCTTCTAAGGCTTCAA 189755 28 100.0 32 ............................ TCTACGACACAGCTCAACAAGTTTATCACTAT 189695 28 100.0 32 ............................ GATTTGCCGACTTTTCAGTAGATTACGTACAT 189635 28 100.0 32 ............................ GCTTTCGGGCGGGGCTGAAAGGAGAAACTATG 189575 28 100.0 32 ............................ TTGAAAAAAGGTGATGCATTATATTTTCCCAT 189515 28 100.0 32 ............................ CATACGCCGTAACCGAATGCCGCCGTCAGCAC 189455 28 100.0 32 ............................ TTTGGGGGTGTGCAGCAGGCTATGCAAGTTAA 189395 28 100.0 32 ............................ TGCTGAGAAGTTGCCTATGGCAGTGGCGTATT 189335 28 100.0 32 ............................ ATTATATCGCGCAAATAATTTTCGTCCTTTTC 189275 28 100.0 32 ............................ GAAAGAGGACAAGGATAAGGCATGAGGCTGAT 189215 28 100.0 32 ............................ TTTTTAAAGTAAGATTCACCACTCCGTTTACT 189155 28 100.0 32 ............................ GCAAAGCGGCTATGACTTTGCTAAAGCTGTAC 189095 28 100.0 32 ............................ GTTTATTTTATTTTCATCAACAAAAAGTGAGA 189035 28 100.0 32 ............................ ATGCCGAAAAGCACACTGCAACAGCGCATTGT 188975 28 100.0 32 ............................ TGACCCGCCAGCTGATCATCAACGATGATATG 188915 28 100.0 32 ............................ ATGTTCAACGAGAGCATACCGACTAAGCGGGA 188855 28 100.0 32 ............................ ACCGGACAGACTAATGTCGTCATACTGCGTTC 188795 28 100.0 32 ............................ TGCAGGAACTCTGTCATCGTCGTTCGCCCAAA 188735 28 100.0 32 ............................ AAGACCGCATTAAGCGGGTGATTATTCAGCTT 188675 28 100.0 32 ............................ ACCATTTCCAACACCACTGGCGGTAAGCAGTC 188615 28 100.0 32 ............................ ATTCGCCGATTTCATCGGCTTGTGTTTGGCTT 188555 28 100.0 32 ............................ AATTTACTTTTGAGGAACAAGCAAGGTATTTT 188495 28 100.0 32 ............................ CCGTTGACGGTGGTCAATCATCAAGTGCAAAT 188435 28 100.0 32 ............................ TAACAGATCAAATATGAACAATAAAGCACTGT 188375 28 100.0 32 ............................ CTAAGCGAGGATCTTTTTTCCACGATTCAATG 188315 28 100.0 32 ............................ ATTGACAATCGCCCACCACTGGCGGTAAAACC 188255 28 100.0 32 ............................ GTTACGCCGAACGAAAGAAAGGCTAATCGAGC 188195 28 100.0 32 ............................ TGCATATCTGGATTATCAGCGCACATTGCTAA 188135 28 100.0 32 ............................ CACTTGCCGCAGGGTTTCCGTGCTGTCTGTAC 188075 28 100.0 32 ............................ AGGCTGATTTAGCTGATAAATGTGGCGTTGCT 188015 28 100.0 32 ............................ TGCATATCTGGATTATCAGCGCACATTGCTAA 187955 28 100.0 32 ............................ CACTTGCCGCAGGGTTTCCGTGCTGTCTGTAC 187895 28 100.0 32 ............................ AGGCTGATTTAGCTGATAAATGTGGCGTTGCT 187835 28 100.0 32 ............................ CGACGTGCAACACTGGAGCAGACCGCACTTGA 187775 28 100.0 32 ............................ AACAGCAATTAATGGGATTCAAAGTGCGGTCA 187715 28 100.0 32 ............................ AGATTGGACTTACGATTGCGGCAATTACCGGG 187655 28 100.0 32 ............................ GATCGTATTGAGCAACGGCGCTGAATTGCATT 187595 28 100.0 32 ............................ CCGAATATGCCGCTCACTATAGCGGAAATACT 187535 28 100.0 32 ............................ ACGATTTTGAAGACGGCGACATCATCGTGCAA 187475 28 100.0 32 ............................ TAGCTGCTGCACTTGCTGCATTAGCTGCATTA 187415 28 100.0 32 ............................ TATATCTCGCTGATTAATCACATCAACAGCCT 187355 28 100.0 32 ............................ AAAGCTGGACAGGTGATTGGTAACTTTAATAA 187295 28 100.0 32 ............................ AAAATCAGAAAAGGGGCTTACCACCCTCCTGA 187235 28 100.0 32 ............................ ACTGAACATAAGTAAAATCACCGCTATCACAC 187175 28 100.0 33 ............................ ACTCAAAGTCCAAATACAGGATTCTGGGTAACT 187114 28 100.0 32 ............................ AAAATGAATGACTGTGAAGGTGCCGGCAGTGA 187054 28 100.0 33 ............................ CACCGGAACCACTATATTGTGATAGTATGGTTT 186993 28 100.0 32 ............................ TTGAACAAGACCTTTTTTATCAAGTTGGCGGA 186933 28 100.0 33 ............................ CGGAGCCGCCAAACGCATCAACAACCGTCCAGC 186872 28 100.0 32 ............................ GCCAAGCGCAGTTAAGGTTTGCAAGCTACTCA 186812 28 100.0 32 ............................ CCTGCGCCGGAACGGGCGCGAATGCCCCATAA 186752 28 100.0 32 ............................ AAGTGCGGTATTGGCGCACCATTTCCCAGATG 186692 28 100.0 32 ............................ TTTGGCAAACGTGCCGTCGGCGATGGTGATCG 186632 28 100.0 32 ............................ ATCAGATATGCGCCCCGACAGTGGTCTTTTTG 186572 28 100.0 32 ............................ GGCAGTTGCCGCAGGAGTATCAAAACGGAGGT 186512 28 100.0 32 ............................ AGAATGCGCAACACAGCGGTATTTTACACAGC 186452 28 100.0 32 ............................ CATATCAAAATAAAAAGAAAAGAGAGGTTTTC 186392 28 100.0 32 ............................ AACTAGAAGCGGTAAAGGGGTTGGTATTGTTA 186332 28 100.0 32 ............................ GCACTAGGCGTTTCAGAAAGCGAATTAACATT 186272 28 100.0 32 ............................ AGACTGCGATTGTCACATCTGGGATAGTAAAA 186212 28 100.0 32 ............................ ACGACCAAGTTTGTGAAAATGCTGATTGCGCA 186152 28 100.0 32 ............................ AGTCAAGATTAGACTGAATCTGCATTTGTCGA 186092 28 100.0 32 ............................ TCATCAAACACTTGTGACGAACCGCCTTTACT 186032 28 100.0 32 ............................ TAACAATATCGCTGAAATGGTTATCCGCCGCC 185972 28 100.0 32 ............................ TTTAAAGTTACCGATAAAAAAAGAGTTGTTGA 185912 28 100.0 32 ............................ ATATCAATAAATAACTTTTGATATCGCACTTT 185852 28 100.0 32 ............................ GCACTTTTAAAGAATTCGCCGAAAAAGGGTTA 185792 28 100.0 32 ............................ TCTAAGCCGTCCATACCGCTCAACCCCGCCGA 185732 28 100.0 32 ............................ GCGCTATATCAGTTATATCAAATCGGATTAAT 185672 28 100.0 32 ............................ GACTTAAGGTGCTTTAAAAAATTGCGCTTTTG 185612 28 100.0 32 ............................ TTGCAAATTTATTCGATTAAACAGACCGTCGG 185552 28 100.0 32 ............................ ATTGCAACAAATGCCATTGCCGCAAGGAAAAC 185492 28 100.0 32 ............................ TTTCTATTTTCTAACAAATCACTCCATACCTT 185432 28 100.0 32 ............................ TACCTCATTGCCATTTTCATCGATTTCCAAGT 185372 28 100.0 32 ............................ AGATTGATGCACGATATTGAGAGGGAATAGAA 185312 28 100.0 33 ............................ TTTTTTAACATTATCTTGTTTTCATCACTGGCT 185251 28 100.0 32 ............................ TGCCGAGTGGCTAAATCGGCTTTCTTTTCGTT 185191 27 89.3 31 ..................A.....-..G CGCAGAATGTAAATCTCCGAATTTTCCTAGT 185133 28 82.1 0 ...AT........T..........A.T. | ========== ====== ====== ====== ============================ ================================= ================== 87 28 99.7 32 GTTGCCTATCACACAGATGGTTTAGAAA # Left flank : TCATATACTAAGTATTCAGAATGTACCATCAAATGTTACTGAACACCTTGTGGTCAAACGCTTACGCCAGCGTACGAATAATGACAAATATACCCGGGATTATGCGAAAAAGCATAATCTCAGCTTTGAAGAAGCGAAAGAGGCAAGAGTGCAGCGTTTTATGGAAGTTCATAATGTCACACTCCAAGAATCTCTTGAGCATTACGAAAATCCAGTGTTAAAACGCCGCCCTTTTATTATTATGCAAAGTTTGCGGACAAAGCAGCAATATTCTTTAGAGATCGAACAGTTACGAGTGAATGGACCAGTAGCGGGTGCTTTTAGCAGTTATGGATTAAGCAGCACAACAACAGTTCCGGCTTGGTAAAATACCTTCATAAAACCGCTCTTTAAAAATTTGTTATTTATCAAATTGTTACAAGATTACTTAAAATAATGGTCAAGCGCAAGGTTTTAATGTCATCCCTTGCCTTGACTATTATTTTAGGTGTAATCTTCTA # Right flank : TTAATCAATATCTACTTTTTGCAACATACTAGGTTGTCTATCATTACTTATAAACAAAATAAACCCCAACCATCGCTACTAAATAAACTATTCCGGTCCAAGCCAGATAAGTCAGCCAGTCTTTTTGCTGTTTATCTTGGCGTGCGAGGCTGAAGTTGAGCCAGGCAAACACCGGGGCGGAGACGAAGGAGGCGGTCATGGCGAAGGGGATCATTTTGCCGATGGCGCTGCTGAAGAACTGGATCACGATAAAGGCGGATAAGGTGGTGAAAAACATCGAGTAACGCAAGGTTTTGTCGTGGTAAGTCGGGTTAAAAGTGCGGTTTTCCTTTGCGGATTTTATCGATTGTCGGAGTAAAATAACAGTTTGTTGGTTGCAGCGGGAATAGCCGTCGACGGCGACGATGGTGGTGCCGTAGATGCAGATAAATGCCACCAGTGCCATAAACCAGCGGGTCCATTCACCGATGCTGAGGGCGTACATCTCTACGAATTGTCGG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCCTATCACACAGATGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //