Array 1 29880-28854 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCC01000027.1 Enterococcus florum strain Gos25-1 sequence27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 29879 36 100.0 30 .................................... CCAATGAGAGTCAATAGCAACAGTAGAATT 29813 36 100.0 30 .................................... TATAGTACCTTTCGGCTAAAAGTACCCTGT 29747 36 100.0 30 .................................... AGGGTTTACTTCTTGGTGGATTCCAGAAGT 29681 36 100.0 30 .................................... TGTCCTTTTCATTCCATCACCTGCCTGCCA 29615 36 100.0 30 .................................... CAATTGTTTTATACTACTAATTTACCACCT 29549 36 100.0 30 .................................... TGATTGAACCTATAATATTAAAAATCGCAC 29483 36 100.0 30 .................................... ATAGATGGCAGGTGCCAAGCTATGCAACAG 29417 36 100.0 30 .................................... CGTTGCAAATTTTATCGGCGCTGGGGTGGA 29351 36 100.0 30 .................................... CAAAGAAGCATTGTCCACATTCTTTACCAT 29285 36 100.0 30 .................................... ATAACCCATTCGAAAGGATTTGATCATCAT 29219 36 100.0 30 .................................... CTGCTTTTTCAAGAGTGATGATTTGACCTT 29153 36 100.0 30 .................................... GCTGTCGCTTATTGACCTATTGCCGGTTCT 29087 36 100.0 30 .................................... TGTTAATCATGTTTTGACTCAAGTTGAGTC 29021 36 100.0 30 .................................... TGTTAATCATGTTTTGACTCAAGTTGAGTC 28955 36 100.0 30 .................................... TCCATTGCTGGCTTCCGCATAAGCTATTAA 28889 36 91.7 0 .............................T.G...T | ========== ====== ====== ====== ==================================== ============================== ================== 16 36 99.5 30 GTTTTTGTACTCTCAAGAAATCAGTAACGGTAAAAC # Left flank : TGGTTATGGATTAATAATCCCAATGCATTTATCTCTAAAAGGGTTTTCTCGCTTTTTCTAAAGAAGTTGAAAAAAATTTCGGAAGACACTAACCTGCTTCATGTGTTCATCATGAGTGATGATTATTTAGATCTTCATTACCAAGCAGAAGACATTTCTAATACGATTTTAGTCTACGAAACGTATCAGCAATTACCACATTTCCATGTTTTGGCTGATTCTATAGGTAATTATTATCCAAACGATTTTTCCTATTCTTCAGAAAATTTAATTACATCATTGTATCGAATTTTCCCATACATTGGATGGGATTCTTCATCAGGAGAAGTGTACTTAAAGAGTAAAGATATGATATTATTAAAAGTGGTTGCTCAACTTTTACCTTGTCATATGAAGATAAAATGTACGGATTTAGGTGAAAAATTGACATCTCTAGAATTAAAATTTTTGTTGAGCTAACTTAAAATACGAAAATTTCAATATGGAGACGTCCGTTTGAG # Right flank : TCTGAATCATTTGCATTTATTGACTATAATATTTTATACTCTTGAAAACTTTTTTAGATCATAAAGTCAAGTCTTTGTGATGTCTAGCTGACAAAATTACCGCACAATAAACTGACTTTTTGCATTTTTCTAAATTAAAATTTTGACTTAGTACAGTCATATTTTCTAAAGTTTACGAGCATACCTCAATATTAAAAGTAAACAAAAAAGCAGAGAATTAAAAATCTACACAAATTTTTTACACCGGATTTTCAGAAAACCGATTTGCTTTCAATACGGTTTTACTAAAGTGGAGATATCAAAAACGGAGAAAAACACAATGAAAAATTTCGCAGGTTAGCAGTTGGACTAGTATGTGCAACAACATTAAGTGACATTTTGACAAGCTATAGCTCGGAAGAAAATACGAATCAGGCAGCAGTTTTCTCTCATCGGTCACTTTTTTGTTCTTTACGATAAGTGTTTTCTAGGCTTGCGATCCGTTGTTCGATGACGACCGC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGAAATCAGTAACGGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 13071-9675 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCC01000033.1 Enterococcus florum strain Gos25-1 sequence33, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 13070 29 100.0 36 ............................. GTGGATGGATTACCTGTAAAAGTAGATGGCAAAATT 13005 29 100.0 37 ............................. TTTATCATGTTCATCCCTACATTCATTATCTATGATG 12939 29 100.0 34 ............................. AAGAGGTACGAACTGTGACAAAGTATTTACAAGT 12876 29 100.0 35 ............................. TTGATTGAGGAACAGATAGACAATTACTTTATTTA 12812 29 100.0 35 ............................. TGAAGCAGACGTGATCAATACTCACTGCAAGAAAG 12748 29 100.0 36 ............................. AAAGCTTGTACTATTGATTGATTTTCTTTAATCCAG 12683 29 100.0 38 ............................. CAGGGTCCAAAAGGAGATACTGGGGCGACAGGGCCCAC 12616 29 100.0 37 ............................. GCTGCTGCTCTTAAAGAGTACGTATAATCAGAGTAGG 12550 29 100.0 35 ............................. AGAGACGCATGTCAAAAGTATTATCGGTTTAGAAG 12486 29 100.0 36 ............................. AAACGATTTAGCAAATGACAAAATGCACGTTTTTTT 12421 29 100.0 35 ............................. GATGGAAAATTAGAATCATTTCCTAACGGTTTTAA 12357 29 100.0 35 ............................. TGCTGTTAATTCGTTCGGCTTTTTGTTTGAAAATT 12293 29 100.0 35 ............................. AGCAGACAAGGGTTACTTTGATATTCGGAAAATGG 12229 29 100.0 36 ............................. GTATTTCCCGGTTGTCCATCTTTTCCCATCAAAGTG 12164 29 100.0 35 ............................. ACTGAAACTTGATTGGCATCATCGTGTTTCTTATT 12100 29 100.0 36 ............................. TATAGTTTCGGTAACTAGATTGCATTATTTAATAAA 12035 29 100.0 37 ............................. GTGCATCGTACTGAGATTGGTTGAAGGGAACCATACC 11969 29 100.0 36 ............................. CGAGACGATATCAATATTGACAAAACAAGGTACGAT 11904 29 100.0 35 ............................. AAATGCCACAATTGTGTATTTCTAAGATAAAAAGT 11840 29 100.0 35 ............................. TCTTCTACATCTTTCGATTTAATATTTAACTTAAA 11776 29 100.0 36 ............................. TTTCAAATGGACGTTCATTCAAATACTTGGAGGTAA 11711 29 100.0 35 ............................. TAATTACAATGTATAATCTGTGTTTCACTAATAAA 11647 29 100.0 36 ............................. TTAGAATTACGAATAGCCTTGTCAATTGAATTCATT 11582 29 100.0 35 ............................. GTACCTTTAGCAAGCTTTCCTGTAACGCTCAACAA 11518 29 100.0 36 ............................. GTCGATAGTCAATTCATTAAAAACTACGATGGTGAG 11453 29 100.0 37 ............................. GAGTATGGATTGTCAGTTCGCCCTAACAGATAATCTG 11387 29 100.0 35 ............................. ATTAATGTCATAGGTCAGGTGCATGTCCTTGCTGT 11323 29 100.0 36 ............................. CATAGTCCACGTGTACAAAATGGATCGCTGTTTCAA 11258 29 100.0 34 ............................. TTGTAACGTCATTGGTACTTTGCCTTGCCACTTG 11195 29 100.0 37 ............................. CTCTAAACGATGACAATCAAGCTGTGTTCGAATTGCC 11129 29 100.0 36 ............................. AACAGCGAACAGTTCGAAGTAATAGAACGCTCCAAT 11064 29 100.0 36 ............................. CCAATATGAATAACCTTGTGGAAATATTGTGTTATG 10999 29 100.0 37 ............................. ATTCTTTAATGGCTTGTGAAGGATTCGACTGGCTCAA 10933 29 100.0 37 ............................. TCAACAATTGTTGAGTACCAAAACAAAGAAACAGATT 10867 29 100.0 36 ............................. CCGGCCTCGGCTTCAACACCCACGGAACTCAATGCT 10802 29 100.0 36 ............................. AGTTGATACAGTTTAGAGTTTGCTAATTGAGACTCA 10737 29 100.0 35 ............................. CGATCAACTTACCACGAGCAACAGCGTCATTCACA 10673 29 100.0 36 ............................. CCGGCCTCGGCTTCAACACCCACGGAACTCAATGCT 10608 29 100.0 36 ............................. AGTTGATACAGTTTAGAGTTTGCTAATTGAGACTCA 10543 29 100.0 35 ............................. CGATCAACTTACCACGAGCAACAGCGTCATTCACA 10479 29 100.0 36 ............................. TTGGACCGAAGATAAGGATTCGATCATCGAAGATAT 10414 29 100.0 36 ............................. TTAGTCTATCAGAACAATCCTTGTACACACACACTA 10349 29 100.0 35 ............................. GCACATGATTAGGCTTATCGAAAAGACCCCTGCGG 10285 29 100.0 36 ............................. AAGTCATTGCGGTAGTAGAAGAAACTACTCGTAAAC 10220 29 100.0 35 ............................. TAAAAGCTTTAGAAGAGGCGAGAAATGATCCTAAT 10156 29 100.0 35 ............................. TAAAAGCTTTAGAAGAGGCGAGAAATGATCCTAAT 10092 29 100.0 35 ............................. AAAGAAGAGTTGTCAAAAGAACTTTATGCGTTTGT 10028 29 100.0 35 ............................. AGAGGTGGACGGAAAATCGGATGTTCGACTGCTGC 9964 29 100.0 36 ............................. CGAGCAACATCAAGTTTCACACACAAGGTTTACTAT 9899 29 100.0 37 ............................. AATGGTTTTTAGCACCGCCGGGTGAAACTAAAGTTCA 9833 29 100.0 36 ............................. GGTGATTAAGAAAAACGAATCAAAAGGTAAAATATC 9768 29 100.0 36 ............................. TTTATTATCATTATATAACCTCCTCTCCCACTCAAT 9703 29 93.1 0 .......................A.G... | ========== ====== ====== ====== ============================= ====================================== ================== 53 29 99.9 36 GTTTGAATCTAAAATAGTGGAATGTAAAT # Left flank : CATTGGCAGAACAAGAAGGCAAAGACTTAGTTGGCGAGGGTATTGCTATTTCTGGAAGAAGGTACTATCAATTGTTGTCAATGAACGCAATAACAGAAAAACAATACAGAAAAGTTTTATTGAAGGACAATTACGTTTATGATCAAAAATTCGGATTAGATTTTATGACTAAATAAGTTTGTACCAGATTATAGGTGGGCTATTGTAGCTAATGGCTATAAGCGTCACCCTTAAGGAGACATCAGATTTATCGAGTCAAACTAAAAGAATTAGCGCTTTTGTTTTTTTGAAGAGTGAAGAAAGCTTTTGATTCTCAGCTCATATCTGTCGACCATGAATTATACGAAAAACCCTTAGTTACGACAGATCAAAAATTCTATTGGTACTAATAGCTTTTTGGAAAAATCGTTGTTATATTTATGTTACGGAACACTAAAAATTGGTCGGTCGACAGAAATAGCTGTTTTGAAGCTGTTAGAATAAGATATAATCAAGGCGGG # Right flank : GCGGATAGCCCTGGTTCACCCCAATGTATGTGATACAATACACAAATAATGATATCTTAAACTTTTGAGTGAAAATGAGCTTGCTAATGAAGTCTATCCTTTTGAAAGGGAGTGCAGGAATGTCGGAAAAAGTCAGAATAGGGTTAATTTCTAAACTTATGCGGATGTCTCCAGAAGCTATTCGATTTTATGAAAAGAAAAAGATTATCTCTCCTAAAAGAATCGAGGACAGCACGTATCGGGAATATTCAATGTCTGATATAAAGAAACTCTATGATTGTAAGAAGCTGCGCAACATTAATTTTTCTATCAAGGAAGTGGATCATATCATGGAAGAAGCTTCCTTGCAGGAAAATAAAGAGGCCTTGCAAAGAAAAAAGGAGGAGCTTCAAAGGAATATTCAAGAACAGCTCGTCATGATTGATCAGATTGATCGCTCGTTGTTGGCAGAATCGACATATGAGAAATATAAGCAAACCTATACCTTGTTGCCTGATATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAATCTAAAATAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 76730-74297 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCC01000005.1 Enterococcus florum strain Gos25-1 sequence05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 76729 29 100.0 37 ............................. TTTTCTAATTGTTCGGGGTGGTGTTTTTGGGTCTATC 76663 29 100.0 37 ............................. ATCGTTAAGTGAGTTGAGGTACCTCACCGTAGCTTGT 76597 29 100.0 35 ............................. TTACCTACAGAAATCACCTTGAGCGTCATACAGGT 76533 29 100.0 36 ............................. GTAAAAATTACCTTCTGAGTAGTGTAGTCTGTATTT 76468 29 100.0 37 ............................. TGATGTAGGTTATTGTCTGGGTAGCTGGAGAAAGTAG 76402 29 100.0 36 ............................. AAAAATATTTAAGCGTTTATGTTCGTCGTTATATTC 76337 29 100.0 35 ............................. TTACGTAACGCTGACAACCGTATTAGCCACAATTG 76273 29 100.0 36 ............................. TAGCACCTTGAGCAATCGTGTAATACTCAGTTACTC 76208 29 100.0 35 ............................. TTAAAAGGTAGTCCGCTGATCGAAGTTATAGAAAC 76144 29 100.0 36 ............................. CAGTATAACCAATTAGTTGTAGGGGCAATCATCAAT 76079 29 100.0 36 ............................. GCAGTATGTTTTATGGGAATTCACGGATAATGTTTA 76014 29 100.0 36 ............................. CAATATTCGGATACTCAACTTCTTTCTCGCTAAACC 75949 29 100.0 36 ............................. TTTAGAAACGCTATCTGCATCCGTGTAAGGATCTCC 75884 29 100.0 36 ............................. AAACTTTTGGTACTTATGAATACACATTCAACGCTG 75819 29 100.0 38 ............................. CCATTGCGAACGTTTCTTTATATTCGTATACTTTTTCA 75752 29 100.0 37 ............................. AATGTATTTGGTCGGGTCGGTTGGCTGCACCTCGTCG 75686 29 100.0 36 ............................. ACCCCAACCTTCCGTTACAACTTTTCCGTGATTTCT 75621 29 100.0 35 ............................. GTTGACGTTCCAAATGAGGCATATCATGGAAGTGA 75557 29 100.0 36 ............................. TATTATATAAACGAGGTTCTCTTGTCCCGAAGTCTC 75492 29 100.0 36 ............................. TCATAATGCAAAAGTCAAGAATACGAAAAGTATATA 75427 29 100.0 36 ............................. ACCTAATACATCAGCAAAAACCCTATCGCATTCGTC 75362 29 100.0 37 ............................. TAAATAGAGAAACCTGATACTGTATCAACCGTCTAAG 75296 29 100.0 36 ............................. TTGGTTTACTATTTTTTCATATTCCAATTGAGCTTT 75231 29 100.0 36 ............................. CAAACAAAAAATCACCGGCTTTCAAATCATTTTTTG 75166 29 100.0 36 ............................. TTAAATGACAGTCACAAACAGTATCTTCCGGATGGT 75101 29 100.0 37 ............................. GATAGACAAGGCAAATATGGCTATGAACAATGCGAAG 75035 29 100.0 36 ............................. TAGCCATTTAGCAAAAGGGCCGCGGTATCGCGTTGT 74970 29 100.0 34 ............................. ATTTTCGGTATTTGATACTCAGTTAGCGCATCGA 74907 29 100.0 35 ............................. GTGTGACCATCACCAAACGAGCTTGAGCCAATTTT 74843 29 100.0 36 ............................. ATGTTTCGCCATTCATGTATCGATTGCGATTCGCAT 74778 29 100.0 35 ............................. CTTTTCAACTTGCGCTGGTGGTGGAGTTGGTTCTG 74714 29 100.0 35 ............................. AAAAAGGCTGTCTATCGCTTTGAAGCAGTTGACAA 74650 29 100.0 36 ............................. TAACTACCAGAACAATGCAGACTGATACGAGCAATG 74585 29 100.0 36 ............................. AAATTGGCGTGGGTTACTAGCATAACTACTTACTAT 74520 29 96.6 36 A............................ TCACCAAGTTTAGGCGAAACAACGTTCCCAGAATGT 74455 29 93.1 36 A....G....................... GAAGGTACAGAGGGCGAAGAAACGGAAGAACCACAA 74390 29 93.1 36 A.....................C...... TTTGATAAGGTCGAAAATGGCCTTGAAGTCAGTGAC 74325 29 82.8 0 A.T...T................AC.... | ========== ====== ====== ====== ============================= ====================================== ================== 38 29 99.1 36 GTCTAAATCTAAAATAGTGGAATGTAAAT # Left flank : TGAACCATTCAAGATTTGGTGGTGATGGGAAATGTATGTAATTTTAGTTTACGATATATCATTAGAAGATAAAGGAGCTCGTGTATTAAATCGAGTTTTCAAAATTTGTAAAAAGTATTTAAGTCATGTTCAAAAGTCAGTGTTTGAGGGAGAAATAACTCCAGCCAAGTTAAAAAAGTTAGAGCAAGAATTAAAAGAGCATGTTCGTGAAGACCTTGATTCGATATTGATTTTCAAAAACTCCAATAAACGATGGCTGACGAAAGAATATATTGGTATCGATGGATCAGAGTTAATCTCAAATTTTTTTTAGATTTTTTCAATCTGTCGACCCCCAATAATGGAAAAAATCTGTAGTTACGACAGATAATGAAAAACCTTGATAATAAAGGTTTTTATGAGATTTGACTGTTATTCTTGTTGGAAATTAGTCTTAAATTTGGCAGGTCGACAGAAATAGCCTTTTTGTGCTTGATGTGACAAGGAAAAGTGTACGCGGG # Right flank : TTATTCCTGCAACAACGCAATATAAATACAAATGACCATCCATGTCAATTAACCTAAAACCATCAACAATCCAAAAGGAGCACCCACATGAAGAAACGTGAATTCATCGTACAAGACTTGCTTAGTAAAATTTACCAAGAGGAATTTCAGAATGGAAAATTGCCAAATCAGCGGGAGCTGGCGCGGATTTATGGGGTCTCGCGTTTTACGATCCAGCAGGCGGTGAAGAACCTGGAAGAGATTGGAATCGTGCGAGTGGTGCAGGGGTCTGGGATTTTTGTGCATGAGGAATGGGTAAAGAATCCGTTGATTTTTAACTCATTGACACGGACACCGTATGATCGGATTGATTCGAAGATGATTGAGTTGAAAAGGGCTCCGGCGACGTTGGAAGAGCAGAAGATCTTTCAGATTAGCGGGTCGGATGAGGTTTGGACCTTTGAGCGGATTCGGATCGTGAATTACAAGATCGAGCAGCTGGAGAGTTCGAAGCTGCCGGT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAAATCTAAAATAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //