Array 1 21884-22764 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_STGK01000016.1 Nocardioides sp. GY 10113 Scaffold15_1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     21884	    28	  93.1	    32	.....T...........-...........	ACCACCACCGCGTATCCGAGCCGGCCGGCGGT	
     21944	    29	  96.6	    32	.....T.......................	GTGTAGATCCCCTCCGGGCCGGGAGCGGTCTT	
     22005	    29	 100.0	    32	.............................	TTCACGGCCAGGCCGACCAGGGTCAGCGCGGC	
     22066	    29	 100.0	    32	.............................	GACTACCTGACCGACGGCCAGCCTCGCCGCAC	
     22127	    29	  96.6	    32	A............................	TTGCCGACAGTGCCGCCGAAGATCCACAGTTC	
     22188	    29	  96.6	    32	.............G...............	TGGGACAGCTGCTTCGAGCAGACCGGCCAGCA	
     22249	    29	  86.2	    32	.C.........ATC...............	AAGATCGGCGAACTGATCCGTAACGTCTTAAA	
     22310	    29	  93.1	    32	.................A..........G	TGGTGCGAGTTGTTCGGAGGCCACATCGATAC	
     22371	    29	  86.2	    32	CG..........T.............G..	TTCACCTGCGGCGTCACGGTCACGAACACGCC	
     22432	    29	  96.6	    32	............A................	TACGAGCGCAACGTCATGACGTTCCGCGCGGA	
     22493	    29	  86.2	    31	.C......T...A............G...	GTGCCACTCGTCTTCGGCGTGGCCGTTGCCT 	
     22553	    29	  96.6	    31	T............................	AAGTTCGGCATCTACGCCCCCAAGGTCGAGA 	TT [22556]
     22615	    29	  86.2	    32	TG......T...................A	TGGGACCGCTGGTTCGAAGTCGCGACGCAGCA	
     22676	    29	 100.0	    31	.............................	GATATCCAGCCGTGCTTCGCCACAATCAACC 	
     22736	    29	  75.9	     0	TG.T..................AC.G.G.	|                               	
==========	======	======	======	=============================	================================	==================
        15	    29	  92.7	    32	GTCCTCCCCGCGCAGGCGGGGGTGAACCC	                                	       

# Left flank :   CAACCCGGCGCGCCATACCCCCACCCGCATCAGTGACGCTGCCGAGCCTGGCGAGCTTCACCGGCGACCGCGATCACATCGACGAGTACAACGAGACGCGGTGGACCACCCAGGCGTCCGTCACCGTTATCCTCACGAGCGCCGATCTCGCTCACCCGGCGCGCCGCTACCTTGCGCACCCCGATCTCCTCGCCGAGGACCGCCACCGCGGGGACGCGACGACCCGCCAACTCCTGGGAGCGACAGTCCCGGTCACAGGCACCTTGGCCGTCGAACTCGGCGTCCGATCGCGCACGCCTGACACGGGGGTTACAACATTCGTGCATGAGAGTCCACTCCTGCACTCCACGCTCGCGGTCGATCTCGATCGGTGTGCGGACTTCGAGCTCGACAGCCATCTCGGACTGCGGCGGGCGAGAGGCCAGTGAGTCACCGAACCAGGCAGATGGAAACCGATGCGAGAATGCACCAAGCGAGAGCGTTGCCGCAGGTGACAAAGT
# Right flank :  CTAGAAGCGGGTTGCGTCGGGGGGCCGTCGTACGTTGCCGCAATCCGACCGCAACTGGAGTTCAGTCTCGATACGTTGCGGCGCGTAGGAGGCCCGCTCGTGCTCGAAGCCCACGCTCAACCGAAGCAGGACGTTCCTGCCGGCTCCCTCGCGCGTGCACACAGCGGCCCTCGTCACAATCTCGCCGAAATCGCCTGGATTCCGGTGACCACGGCTGACGGTAAGTACGCCGAGCTCTCGCTCGCAGAAGCCCTCCTCAACGGACACGAGTACGCAGGGCTGGCGTGCGCCGACCCGCTAGAGTACGCAGCACTGTCCAGGTACCTGATCGCGCTGACCTACCTCGTGCACGCCCACGACCCAGCGCGCGGCTGGCACGCGGTCGGCCTCGGGAAGGCTCCGTTCCCTCGGCACGCTGTCGACGCGGTTCTCGGCCGCCTGGCCGATCACTTGTGGCTCTTCCACCCGACCACCCCGTTTCTCCAGCAGCCGCGCCTGCG

# Questionable array : NO	 Score: 5.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCCTCCCCGCGCAGGCGGGGGTGAACCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [3,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTCTCCCCGCGCAGGCGGGGGTGATCCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.30,-5.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [3-13] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [45.0-35.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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