Array 1 2820206-2823130 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGJO010000001.1 Micromonospora sp. HB375 Ga0265261_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================================================================================================================================================================== ================== 2820206 37 100.0 37 ..................................... GGATCTTCGCCGGCGGCGCCGACCTTACCGGCCAGTC 2820280 37 97.3 39 ..................................G.. ACGACCGGGCCGGCCAGATCCTCCACCGCAGTCCGGGCC 2820356 37 100.0 36 ..................................... CCCGTTAGGAGTGAGGCTGTCCGCCTCCTCCGGATC 2820429 37 100.0 36 ..................................... GCAGGCGGTGGCGCCGCAGAAGACCGGCAAGGGGCC 2820502 37 100.0 37 ..................................... GCACGGTCGCCAATAGTTACGCGGCCGGAGATCGGGA 2820576 37 100.0 40 ..................................... ACGCTCACCTTCAACGGCGAGACCACCGGCGCGATCGCGT 2820653 37 100.0 37 ..................................... GTCGTCGGCGCGGTCGTTCTCTGGAGCCGGTGATGGA 2820727 37 100.0 38 ..................................... GTTGGGCCGGATCGCCGCCCGATCTGTTTCTACTGGTC 2820802 37 100.0 38 ..................................... GGCCTTGACGGCTGCCTCGGTTGCGGGGCCGAACGCGC 2820877 37 100.0 38 ..................................... GCCGACGTCGACGGCCCCGGGCAGGCGCTCGTGCTCGT 2820952 37 100.0 37 ..................................... TTTCTGGCCCACCTGTGTTGTCGATGGGTCAGAGCAT 2821026 37 100.0 34 ..................................... CCCCGTGGGGGTGTCACGCTGAGTCACATCAGGG 2821097 37 100.0 47 ..................................... CCGCACGCGGAGCGCAGGTCGCTGCGCGGCGCCCTCGACGCTGCGCC 2821173 36 97.3 38 -.................................... CATGTTCCGGGTCATCAAGGAAGAGTGGGACGAGGAGC 2821248 37 100.0 36 ..................................... CTCCTGGCCGCCGGGCTGTACGACCACGGCGACAAG 2821321 37 100.0 37 ..................................... GTCAGGCGGCCTTCGGCGTTGAGCTGCGCGGCGACCT 2821395 37 100.0 38 ..................................... GAGGTGCCGCCACTTCGCCTTGTCGTCGGTGGCCGCCA 2821470 37 100.0 37 ..................................... TCATTTCCCGCCCTGAAATGAGGGGCCGTACCGACCG 2821544 37 100.0 36 ..................................... ACGTCGAGGAACTGGATGGTCTGGATCCACGACCAC 2821617 37 100.0 36 ..................................... AGCGGTGGCCCGTCTGCGGTGACCTCCTGCCACAGC 2821690 37 100.0 37 ..................................... TCCGACCCGGTTCCCCGGCCCCGTATCGGCATGCCCG 2821764 37 100.0 37 ..................................... GCGCCGTGCGGCGTCGCCGAACCGGCCGAGTCGCCGG 2821838 37 100.0 39 ..................................... GCCCTTGCGGTCGAGCTCGCCGGTCTCGCGCTGCACCCA 2821914 37 100.0 37 ..................................... GTGTGCTGGTGTGCTCGTGTGGCATCGGTGCCCTCCC 2821988 37 100.0 37 ..................................... CCGTCGCGGTTGTCGAGGGTGAACCGCGCGGTCTGCG 2822062 37 100.0 37 ..................................... GCAGGTGCAGCCGCCGGCGCCCATGAGGAACACGTTC 2822136 37 100.0 37 ..................................... TCCGGCATGTGGCGGCTCCACCGGCCGGCGAGCCGGT 2822210 37 100.0 36 ..................................... ATGCCGTCGAGCGCGGCGTGCACCTCGCGCGCCAGG 2822283 37 100.0 37 ..................................... GACCACCCGATCGGCGGCTCGTCGTCGTGCGCCGGCA 2822357 37 97.3 36 ......T.............................. ACGCCACGGCCGGCGGGCGTCATGCCCAACGCGGTC 2822430 37 100.0 36 ..................................... CGCGGCCCGGGTCTGCGGATCGCGGTACGGCTGGAC 2822503 37 100.0 39 ..................................... GAGGAGCTGCCGTGCCTGGTCGGCGTGGTGATGAAGGAG 2822579 37 100.0 182 ..................................... CAGATCAAGGTGGACCGGGACTGTGGCCCGGCCACCGAGCTGCGCCCCTCGAGGGCGGGCGAGGATCGCAACCAGATCAAGGTGGACCGGGACTGTGGCCCGGCCACCGAGCTGCGCCCCTCGAGGGCGGGCGAGGATCGCAACCAGATCAAGGTGGACCGGGACTGTGGCCCGGCCACCGA C [2822588] 2822799 37 97.3 35 .................G................... AACGCCCTCAGCCGCACGCTCACCGCCACCGAGCC 2822871 37 97.3 35 ...................................G. ACCAGCTGGTCGACGGTGTCCGGCGCGAAGCCCAT 2822943 37 97.3 37 .................T................... ACCACTTCGAAGGTTCTGCCGCACCGGCCGCACTGGA 2823017 37 97.3 40 ..G.................................. GGTTGTGCCGGCCCGCCGGGTGGTGGCGCCGTGACCGAGA 2823094 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================================================================================================================================================================== ================== 38 37 99.5 41 GCTGCGCCCGCCCTCGACGGCGGGCGAGGATCGCAAC # Left flank : AAGGCAATCTGGCATCGCTATCGGTAAGGCCTGAGTAGCTCTGTTTCGGATTGCTGGCCGTTGCTCATCAACGTAATTCGCCGGAGTCGCGTGTCTCAGGGGTGTGCGGCATGGATGGGGCCGATGACGTTGCGTACAACTCGTCGAAGGGAGTCGAGGATGTCGGAAGAGGAAGTCCACAGGCACCTACTGCCTTTCAGGGCGCTGGACGGCATTGCATGTTTACTGGGGTTCCTGAAGTGCTCCGGTCCGCTTGGCCTGTACGCCGAATAGCTCGCTGCCGACGGCGCCGCCCTGGGCTAACGCGCGTTGTACTACTTCCGAGAGCTCGCCTCGTGGCTCCGCCCCGCAGGCCAAACGGTTGGGTGATCTAGGAACCTGTAGCAGTCATGCTCGACGCGGAAGGTTCCTAGGCGGCAATAGATGTGAATCGGGATGAAGGGTGCCCAAGATCAACCTGAGGAAAGCCGCCTGCGATACGTTTTCACTGCTCAAGAACC # Right flank : CAACGTCTCCGATGAAGGGCGGCGGCGTGGTGCCTGCCATCTGGGGGTTCTTCCGGGTGAGCGTCGAGGAGCCGACATCCTTCTCGGCGGGTTACGCGGCTACAATCAGCGACCTAAAGCATCCATGGTGTGGGCACCAAGCCATTTTTAGGCCGCCTCATCTCTAACCGTGGCAGACGCAGCCGGCCGTCACGAGATTAGGATCGCACGTGTCTGACATGACGCCTCTTTGGGCTCATAGCCCCGCTTCTGGCGGTGGCCCATGGCATGCGCTCTCGGATCATCTTCAGAGCACTGCCGAGCTCGCACAGCTGTTTACTGCATCGTTCGGCGGAGGTGATCTGGCCTACTGGCTGGGCGCGCTCCACGACGTGGGCAAGGCAGCCTGTGCGTGGCAGGACAAGCTCGCTGCTGCCGCGGCCACCGGCGCTCCCGTCGGTATCGACCATAAGGCGTTCGGAACGTGGGTGGCGAACGAACGTGGACTGGGCGGCTTCGCC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.36, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGCGCCCGCCCTCGACGGCGGGCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCTGCGCCCGGCCCTCGCGCCGGGCGAGGATCGCAAC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-16.20,-17.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2831363-2837058 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGJO010000001.1 Micromonospora sp. HB375 Ga0265261_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 2831363 37 97.3 38 ....................................A AGATGCGCCGACTCCCGGCCACCGTTGACGCGGCCCGG 2831438 37 97.3 38 ....................................A TCCGCGCCAGGTACCGGGTGGCGGCGGCGGTGGCCTGG 2831513 37 97.3 37 ....................................A TCAGCTCGTCACCTCGATCACGCCCACCCGACGGGCC 2831587 37 100.0 36 ..................................... GTACGTGCCGACGGCGTGGTCGACGTCGGGGCCGTA 2831660 37 100.0 39 ..................................... AACCGGTGCGTGCGGCACCTCGCGAAGTACGTCACCGAC 2831736 37 100.0 38 ..................................... ACCGACGAGCAGGTGCGGGCGCTGCTGGTCATGGAGGA 2831811 37 100.0 38 ..................................... CTCTTCGCCCGTCGAGGTGGTGAGCGCCGGTGCCGCAG 2831886 37 100.0 38 ..................................... GGCGTGAAGGCGAGCGGCGAGAGTCTGCCGTCCCTGAC 2831961 37 100.0 38 ..................................... GTCTTGACCCACGCCCCGCCGGGCGTGGTGGAGCCGTA 2832036 37 100.0 38 ..................................... GCCCGCTCCCCGCTCGCCGAGGACGGCGGTCACCTGGT 2832111 37 100.0 37 ..................................... CTGCGGCTGGTGTGCGGGTGTCTCGTCAGCGTCGACC 2832185 37 100.0 34 ..................................... TCGGCGCCGCGCTGCTGGCCCGCAACGCGGTGGA 2832256 37 100.0 36 ..................................... CTGGTCCTGCCCTGGTACGTCGCCGCGCCGATCGTC 2832329 37 100.0 37 ..................................... TCCCACTGATCGGCCACGTACCGCACCGGGTCACTGA 2832403 37 97.3 38 ...............A..................... GGTGAGCTGACCGGCATGACGGCGGGAAAAGCGCCGAC 2832478 37 100.0 38 ..................................... GCTGGTGTGGCCGGTGCCGGTTTCGGCGCCGGAGCCTT 2832553 37 100.0 38 ..................................... GCCGGGCCGACGGTCACCTCGGTCGAGCGGCTCGGTAC 2832628 37 100.0 38 ..................................... TAGGGGGGATCGACCATGCCCTATCTGTATGCCGAGGT 2832703 37 100.0 37 ..................................... TCGACAACGTCACCGACTTCGAGGACGCCCTCGTGAG 2832777 37 100.0 35 ..................................... GTCTTCCGCACGCCGGACAGGTCCAGGTCGGGGAC 2832849 37 100.0 38 ..................................... TGGAGCGACGCCCTGACCGAGCCGGTCGACGCGGCCGC 2832924 37 100.0 38 ..................................... CTCATCATGCTTGTCGTCAACCTCATCGGCGGGTGGCT 2832999 37 100.0 38 ..................................... TCCGGGGACAGGCCGGCCAGCAGCAGCGGCGCGAGATG 2833074 37 100.0 42 ..................................... ACTTGCGGGGCGGCCGGCGGGAACGGCTCGACTTCGAGGCGC 2833153 37 100.0 37 ..................................... ATCGCCCAGGTCGACAGCACCGCCGGACTGGACGCCT 2833227 37 97.3 37 .........................A........... ACCTCGATCTACCGGACGCTGAGCCAGGCGCAGACTA 2833301 36 97.3 37 .......................-............. ACCGGCGCGACCGGCGCCGCCGCGGTGAAGTTCGGCT 2833374 37 100.0 38 ..................................... ACCAAGCTCACCGCCGAGATGGTCCGCCACGCCGTCGT 2833449 37 100.0 39 ..................................... ACCAGGTTTCATGATCACTTCTCCCTGTTCGGTGGGGGT 2833525 37 100.0 38 ..................................... CTCGTACGGGTCGGTCACGACAGCCGCCACCGGGACGA 2833600 37 100.0 36 ..................................... TGGACCGACGACCGCACCGGCATCTGGCGCCGCGCC 2833673 37 100.0 36 ..................................... TGGACCGACGACCGCACCGGCATCTGGCGCCGCGCC 2833746 37 100.0 40 ..................................... GGGCTGGCGTTGGTGGCCCAGGTGTAGCTGCTGGCCTCGC 2833823 37 100.0 36 ..................................... CATTGGGCTTGCTGGAGCGCCACCTCCACGGCGTAG 2833896 37 100.0 37 ..................................... GGTCTGGCCGGTGACGAGCCGGGCATCGTGGCGGGCG 2833970 37 100.0 38 ..................................... GCGTGGTGGGACGCTTACCCGGACGAGTACGACCGGAT 2834045 37 100.0 35 ..................................... TCCAGCGCGAGGGCGAGCGTCGACGGCTGCACGTC 2834117 37 100.0 37 ..................................... CTGAACCGGTAACCGGTCATGGCGTCGGCTGACGGTA 2834191 37 100.0 38 ..................................... CCGCCGAGCCGGCTGACGCCCGTGTGGGTCGAGAAGCA 2834266 37 100.0 38 ..................................... AAGCCGGTCAAGGCGGCGGCTCCGGCGCTGGTCGGCAA 2834341 37 100.0 38 ..................................... AAGCCGGTCAAGGCGGCGGCTCCGGCGCTGGTCGGCAA 2834416 37 100.0 38 ..................................... GAGCAGGTGTACCGCGTCCAGGACGGGCGTGTGCGGCT 2834491 37 100.0 35 ..................................... ATCGGATCGACCTCCGGAGAGCGATGCGGGCGGTC 2834563 37 100.0 38 ..................................... TGGACGGTGAAGAAGCGGGTCCAGCCGCCGCGGCGGTC 2834638 37 97.3 38 ..........G.......................... AAGATGGCGCACGCCGTGCACGCGCGCCGGTCCGAGGC 2834713 37 100.0 38 ..................................... CTACGGCCACTCCGGCGGGTCCGCCGGGGTCGCCGTCC 2834788 37 100.0 36 ..................................... CTGCTCGACGACAAGCAGGTCCGGTCGGGCCGGCAC 2834861 37 100.0 35 ..................................... ACCAGGACCGCAAGGTGGGGGCCTATGGTCATCAT 2834933 37 100.0 38 ..................................... CGTCGGAGGACCCGGGCGCCGAGGCCGGGAAGCCGGCG 2835008 37 100.0 38 ..................................... GATCTGCGGGCGCTGGCCGAGCAGCACGTGACGGCCGC 2835083 37 100.0 38 ..................................... CGTCGGAGGACCCGGGCGCCAAGGCCGGGAAGCCGGCG 2835158 37 100.0 36 ..................................... GACCTCGTGAGGCGGGACGCGGCGGCGGTCGCGGTC 2835231 37 100.0 38 ..................................... GGCATCGCCCAGACCGACGCCCTCGCCCGGATCCGCCA 2835306 37 100.0 37 ..................................... CGAGCAAGGGCGCGGGCAAGGGCAGCGCTACCCCCGA 2835380 37 100.0 37 ..................................... CGTAGGGAGTAGCGCTATGAGCGCAGACGACAACGAC 2835454 37 100.0 37 ..................................... TCGGCCTTCCAGGTCTCGTACGCGGTGGCCACCTGGG 2835528 37 97.3 37 .....................T............... CCCGGGCAGGCGTACGCGGACGCAGAGGAGGCGTTGC 2835602 37 100.0 38 ..................................... CTGCCGGGTGTCGTTTACGACATCACCGGGTTGACGGC 2835677 37 100.0 36 ..................................... ATCGACACCCCCACCGTCGAGGACCAGCCCGGGCCG 2835750 37 100.0 38 ..................................... TACACGCCGTTGCCGCCGGGGCCGCTGCTGGGCGGCGA 2835825 37 100.0 38 ..................................... TACACGCCGTTGCCGCCGGGGCCGCTGCTGGGCGGCGA 2835900 37 100.0 39 ..................................... ATCCACGACATGTACGGGAAGAAGACGAAGGAGCTGATC 2835976 37 100.0 37 ..................................... GCGGTGTCCGCCCGCCGCGCCGCGGTCAGCTCCTGGT 2836050 37 100.0 38 ..................................... CACGGGTCGCCGCTCGACGTGAACGCTGTCACATCCTT 2836125 37 100.0 38 ..................................... GACGTGTCCGGCCAGCCTCGGTGTACGCCGATCGAGAC 2836200 37 97.3 37 ....................T................ TCCGTGGGGTGGATGGCGCGGCCCTGCATGTTGGGTG 2836274 37 100.0 38 ..................................... CCCACCCAGACGGACCCGATCACCATGCGCGCCAGCGT 2836349 37 100.0 38 ..................................... GTCAGTCGAGCGGCCGGCGGCCGGCCAGGAAGTGGCGC 2836424 37 100.0 38 ..................................... GAACGCAAGACTGATGCCGACCGGCACGACGCGCTCAT 2836499 37 100.0 38 ..................................... TCCCGGGCCTCGTCTAGGACGGCCTGCGACGCCGGGTC 2836574 37 100.0 37 ..................................... ACCGCGTACACGTCGGCGAGCGCGAGCGCGCCGGCGG 2836648 37 97.3 40 ............T........................ GATCCCAACCGGCCACGTTTCGTGCCGGGTGGGGCCGCGC 2836725 37 100.0 38 ..................................... GACATGTCGCTGAGCGAGACCGCCGACGCGCTCGGCAG 2836800 37 100.0 36 ..................................... TATGTCGCGGTGCTGGGCGTCGCCCTGGTCGGCTCC 2836873 37 100.0 37 ..................................... GGGTCCAGCCGTAGAGACGCGAGTTGGATCCCTCCGT 2836947 37 100.0 38 ..................................... ACGAACTTGCCGCGCATGTCGTGAAGCCGGCCGTTCGC 2837022 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 77 37 99.6 37 GCTGCGCCCGCCCTCCGCGGCGGGCGAGGATCGCAAC # Left flank : TCCTGCCGCTTGTGCAGGCGCGACTGCTCGCCCGACACCTGCGCGGAGACATCGAGGCGTACCGGCCCTGGACGGTCAACTGAGATGGACCTGCTCATCACGTACGACGTCGAGACGGCCACGCAAGCGGGCCAGCGGCGTCTCCGAAAGGTCGCAAAAATCTGCGAAGCGTATGGCCACCGCGTGCAGAAATCCGTCTTCGAGGTCGTATGCCGCGAGCCTGACAAGGTGAAACTTGTCGATGCTCTCGCCCGGGCGATCGACCCGGCTCTCGACAGCGTCCGTATCTACCGGCTACCCGCACAGGCACTCGACGACGTCGAACACCTCGGCCGTGCCCGGCAGGTAGATCCTCGGGGCCCCTTAGTGATCTAGGAACCTCCAGTGCGCACGCTCAAGGCAGGGGGTTCCGAAGCAGTGAATGGCTCCAATCGGTACTAATGCCACGCAAGATCGACTCGGTGTTGTTGTCCGCTACGTATTTCGGCTGTTCAAGAGCC # Right flank : CGGTGTGCTGGTCAGGGGATCGTGCCGAGGCGGCCGCTCGTCTCCACACTTCCTAAACCGTGTGTGGCCGGTCGTATTCTGCCGGGGCACCTCGAACATCAGCTAACGGCCGGTTACGTGCCCCAGTAGACGAGAGACCGGAGCGTCAGTCGTGTCTTCTGGACAGCCCTCGCCCAACTAACGTTGCCATTTATCGCGTCGCCACCGCCGCCGAGCTCGACGACACCGCGACGCGCAGCGTCGGTCGCCGCGTTTCCCGGCCGCCCGCGTTTTACCCGTGGAATCGGGCGACGACGGGGGCATGGTCTGGCACGACGACCTTCTCCCGGCTGCGGGTGGAGGCGCCAATAGAGGTGATGTCATCAACGAGGGAGTCGACGGTGATCAGGCGGAATTGGAGGTCGCGGGTTGCCAGGATGTGGTCGATGAGCTCGCCGTTGCCTTGGTAGATGCGGGAGTATGCGCGGGCTGGGGGGAGGCGTCGTCCGAGGTTGTACAGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGCGCCCGCCCTCCGCGGCGGGCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCTGCGCCCGGCCTCCGCGCCGGGCGAGGATCGCAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-16.20,-17.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-3] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //