Array 1 313454-314546 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACTKB010000003.1 Listeria welshimeri strain FSL W9-0576 NODE_3_length_321692_cov_58.448715, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    313454	    36	 100.0	    30	....................................	CGGACTTCGAAATCAGTACTACAAAGATTA	
    313520	    36	 100.0	    30	....................................	ATATAACTCACTCATATTCTTACAGTCACT	
    313586	    36	 100.0	    30	....................................	TGGCATGGAACGTGCCGGTCATAAGTGTGT	
    313652	    36	 100.0	    30	....................................	TGAAGAGTAAATTATTAGTTGTTATTAGTT	
    313718	    36	 100.0	    30	....................................	TTGTGTTGGGTTTGCATTAATGGTTGTTTT	
    313784	    36	 100.0	    30	....................................	GATACCAATGAACGCAAATACTGGAGCATA	
    313850	    36	 100.0	    30	....................................	TTCCAAGCGGGCACCCCTGCATCTACTAAG	
    313916	    36	 100.0	    30	....................................	AGTATCACAAAAACTATCTGAAAAAGTTGG	
    313982	    36	 100.0	    30	....................................	TTCAGGGCCTTAGCTTGTTTGAGTTGACCA	
    314048	    36	 100.0	    30	....................................	CTCAACACAAGACAGGTGGTGACAGTGATA	
    314114	    36	 100.0	    30	....................................	AGTCCCGAATTTTACATATCTAGCAATAAG	
    314180	    36	 100.0	    30	....................................	GATGCAAAGTTATCAACGGATGATGACGTG	
    314246	    36	 100.0	    30	....................................	TTAAATCAAATATAACTATGTAACCACCTG	
    314312	    36	 100.0	    30	....................................	AAGCAAAATTGCTGAAGAGCATCCGATTTT	
    314378	    36	 100.0	    30	....................................	TTCTTCTCGGTATTGCGGTGATGGTTTGCT	
    314444	    36	 100.0	    28	....................................	GAATATTCTCCCCCCATCGCTAACAGGG  	
    314508	    36	  83.3	     0	............CA.....C.....T.A.......G	|                             	A,A,C [314533,314539,314542]
==========	======	======	======	====================================	==============================	==================
        17	    36	  99.0	    30	GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	                              	       

# Left flank :   GACAAATTAACCGCGACGATTAGCGAGTTGATAGGTTACGAATTATTGGAGCATGAACTGGATTTAGAAGAAGATGAAATAACGGTCATTGAATTATTCAAAGCTTTAGGAATAAAAATAGAAACAAAAAGCGATACCGTATTTGAGAAGTTAATTGAAATAGTACAAGTCTATAAATATCTATCTAAAAAGAAATTGTTAATACTTATTAACGTGTGTTCCTATCTTACAGAGGAAGAACTGCTAGAGTTGAGACGGTATATCTCTTTATATCAAGTCAAAGTACTATTTATTGAACCTAGAAAAATAAAAGGATCTTCGCAAGTTACTTTAGATTCTGATTATTTTTTACACGTAGAAAATAGTGTATAAGGTAACCGCTGTTCTTTGAAAACAAAATAAATTTTATGTAAACCATAAAATAGCATTCAAAATTGAAATCTTGCTATGGATGAATGGCGCGATTACGGAATCTTGGAGGAAAGAAAAAATTCTGCGAG
# Right flank :  GATAAAATGCATCGCAATTACAAAACATGGTTAAATTTAAAAAGGAGTTAGGTATCTATATGACACAGTATCACTATCTTACTTCGAAGTCGCTCTTAGAAAATGATGGGGAAAAGTTTCCTCGTCTTTATATTAGACTTCTTAAATTTGAATTTTGATATGAATGTTGACCAAGACACTAATGAATTGTTTTTCTATTCAATTGATTTGAACTCAGCTTGTAAATTTCAACTTGCTGTAAGTAAAGGGAACCTGCCGCTGAAAGGTAATCGGCAAAAAAATTGTTACGAGACTTAAAATTTAAAAATCTTGTATGATTATATTCTAAATACAAGTAAAGATAATGAAACGATTGAACTATATACTGCTTGAAACAGCGAGGAGGATTTCCTGTTTTTGAATAAAACAGAACTGCTGATCTAGAATTTAACTATCGAAAATCTAATTTTAAATGACAGAGAGCTATTAATAATTAGAAATGAAAACCGATATAACTTTTA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.30,-0.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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