Array 1 16758-17273 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAOU010000016.1 Arcanobacterium phocae strain ARCANO21 NODE_16_length_17273_cov_89.964003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 16758 28 96.4 33 ...G........................ CGACGGTGCGCGTCACGTCATGTCCGCGAGCAC 16819 28 100.0 33 ............................ GCGAAAGTGCAAGACGCACAGCTAATTCCACCG 16880 28 100.0 33 ............................ AACCATTTCAACGATTTCGTCCTACACAGCAAG 16941 28 100.0 33 ............................ TCTTCAACGGTTTGGAGGGCATACCATGATGTG 17002 28 100.0 33 ............................ CATCTACTAGCTCGATTTTTAGCGCACCTCCTG 17063 28 100.0 33 ............................ ACAAGTACAGCAAATCTTGCAGCAATGCGAGAA 17124 28 92.9 33 AG.......................... ACCCTCTTGACCAGGCGGAAGGATTAGACCTTG 17185 28 100.0 33 ............................ GGCGACCAGCTTCTTGCCATTCTCGAAGCTGTG 17246 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 9 28 98.8 33 GAAATACCCCCGCGTGTGCGGGGAAGAG # Left flank : TGTTGGGTTTTCTCCTAGGTCTGTACCGGCTCCTTGGAATTTGGCAAAGATGATCAGGACAAGGATGATCGTGAAACCGTGAAGCATGGCCGTTGCATACTTCTTGAGGTATCCGATCGAAATTTATTTTGTGTCGGTATGACCCAAGAATGCTAACGGTAGAGTTGCCCCAGCAGAAAGTATGTATATCTCAGCAAATCGCAAGAGTACAACGATTTTTACGACGATGCCGCCAAGCATTGAAATCAGCCAGGGCAAGAATAGAATGATCATTGCGCCGATCATATCTAGAGTATCCATATCAAGATCACCGATATTGACAGGGTTAGCCTGTATGACTGTTGCATACTTTTTCAGCCCGTTAATAAGTGTTTCGCCAGCTTCGTTAATAGCTTTAAGAATTAGATCTACATTTTGAATAGCGACAATAAGAAGCGCTACCTTGATCATGATCGTTCCGATCACTTGAGCGCCCATCTTTGAATCGCCTTCAAATTTTG # Right flank : | # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAATACCCCCGCGTGTGCGGGGAAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-2] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 1 49-2642 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAOU010000014.1 Arcanobacterium phocae strain ARCANO21 NODE_14_length_37280_cov_84.198667, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 49 29 100.0 32 ............................. ACGGCACGCGCGGTTAGTGTGCGTTCTTCTAA 110 29 100.0 32 ............................. GGCGACCAGCTTCTTGCCATTCTCGAAGCTGT 171 29 100.0 32 ............................. GCGCCATCAGCTCAGCAGCGCGCACCAAAGCA 232 29 100.0 32 ............................. TGGATTCTTTAACGGTTGTCTTGGGGTGGCTC 293 29 100.0 32 ............................. AGCGTTCTTGACAATCCAGCCCTTCGGATATA 354 29 100.0 32 ............................. ACGATTATCGGCGCTACAATCAAGACTCGCAA 415 29 100.0 32 ............................. CCGTCACTGGACGGGCGGGAATATTCGCTGAT 476 29 100.0 32 ............................. GAGGTCCAGCAAGTAACTCGACAGGCACACCA 537 29 100.0 32 ............................. CCGGGAGAGTGGACAGGAGGAATTTACAGTAT 598 29 100.0 32 ............................. GAAAAGCGCAGGGGATATTTTTATACCCAAAA 659 29 100.0 32 ............................. GGAGTCTAGCCAGATTTTCGATGTTGATAACG 720 29 100.0 32 ............................. AACGTTATCCGTGGTTTCGTGAACGGTATCTC 781 29 100.0 32 ............................. CATCCGTGTACGCCAACTCCGGTACTGCACTA 842 29 96.6 32 A............................ ATGAAAAAACTATAACACCAGCCCAGGCCGAG 903 29 100.0 33 ............................. CCCCGAAGAACGCGCCTTCCGAGTAGCTTTTGG 965 29 96.6 32 T............................ AGGAAGGTTGGCGAGATAGCACCTTCCAAGTC 1026 29 100.0 32 ............................. GTATGACTACACTTCGAAAACCTTACGCATTC 1087 29 100.0 32 ............................. GGTTCTCGCCAGTTAGACTCTCGATATAAGCT 1148 29 100.0 32 ............................. TCAAAGAAATAGCTAGCTTTATTACTGGAACA 1209 29 100.0 32 ............................. TGTAGCCGTGGACGGTTTTCAATGATCTTTTC 1270 29 100.0 32 ............................. AAAAGTAGTGCAGGCAGGATAGAGGACGAACC 1331 29 100.0 32 ............................. TTCCCAACTCCTTCCGCTATCTCGTAGAGCCT 1392 29 100.0 32 ............................. CAGCGTTCCTGCCGATCGCATAGCTCGAAATT 1453 29 100.0 32 ............................. GCAAATGGCGGGATTCCATGGAACGTCAAAAC 1514 29 100.0 32 ............................. AGCGCTCATGGGATCCAACCCTTTCCGATGTC 1575 29 100.0 32 ............................. TCGGGGAGAACCTCGACGACTGGGCACAAATC 1636 29 100.0 32 ............................. GCGGTAGGTGAGAAGAAGTTATGTCCGAAAAT 1697 29 100.0 32 ............................. TACTGGTAGAAGGCCAGTGGCGAACCCATCAC 1758 29 93.1 32 C.C.......................... TATAGATGACCGCCTAAGGGGCAACTTAGACG 1819 29 100.0 33 ............................. AATCATTTCGTACTACTCCTCAACGGAGCCACT 1881 29 100.0 32 ............................. AACGGTTCCTGGGGCTGGGGTTGTTTCTCAGT 1942 29 100.0 32 ............................. ATTCGCTTGAACCTCATAGAAATCTTCGATCA 2003 29 100.0 32 ............................. GAGCGTTGAACGCCGGGTTGATTCAGTATTCA 2064 29 100.0 32 ............................. AATGGCAAACTTCGTAAATAATGCAATAGCTT 2125 29 100.0 32 ............................. ATGCACGCTTCAATGACGCATTAACAATCAAT 2186 29 100.0 32 ............................. GCTAATAGGAACGCTCGCAACGCACGCATGGC 2247 29 100.0 32 ............................. CCAGCAGGGAAGTCCCCCTGTGAAGAAGATTT 2308 29 100.0 32 ............................. GCTGAGGAATTTACAAAGAAATTGATTACGCC 2369 29 100.0 32 ............................. CGGTTTAACACGCCGGCTATTTTCGTATTCAG 2430 29 100.0 32 ............................. TCTATCCGCTCGACGTGCGGTGTAGGTATCTG 2491 29 100.0 32 ............................. GTGATGTGTGCTTCCTCAACGGCGTTGCGGAA 2552 29 100.0 33 ............................. AAGTACGAATTGGTATATCGATATTAAAATCAT 2614 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 43 29 99.7 32 GGAAATACCCCCGCGTGTGCGGGGAAGAG # Left flank : CGTGTGCGGGGAAGAGGGCGACCAGCTTCTTGCCATTCTCGAAGCTGTG # Right flank : GACTAACGAAAGCCTTTATTTTCAACGATCTCGAATTTTGGATTCTCCACGTCCAGGACGCATGGACACAACGGTTAGACCGTCTAAGTCCAATACTTTTCGTGAATTTTTTCCTGCAGTGAGCATCGAGAATCCTTGTTCTTGTCGCGGGTCGCTATAAATCATAGTAGAAGTTCCTTCGTCAAGCGTACTACTCACACGTTCCCATAGGCGTTCACGCACGTTCCGAGAAATATTTCCGACGTAAACCCCACTTTCAACCTCAGTGAGAAATCGGGTTACATAGCCATGAAGATGCTCGGGAACTGCAGATATTGTTAAGACTGCAAACATCACTCATCATCTTTTCCGTATTGTACGTGCCCAGAAACTTCACCATTATCATTGATCAATCGATCATCATCACGATTCGGCAGGTGTGGTTCTAAGATCTCCATGAGCGTGCCAAGCATGTCTTCCAATATATGCTTGCTATGAATTTGCCTCCGTAAATCGCGTCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAAATACCCCCGCGTGTGCGGGGAAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA //