Array 1 2106741-2104472 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011642.1 Serratia marcescens strain CAV1492 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2106740 29 100.0 32 ............................. GCCTTGGAAGCTCGCTTGTTGATATCCTGCTG 2106679 29 100.0 32 ............................. CGAACTGGCCGAAATGTCGGTGCGCAGTTCGC 2106618 29 100.0 32 ............................. CCCCAAGGCGGCCATGACGTCAGTGCCAGTGA 2106557 29 100.0 32 ............................. CCTGGACTAAACCTCTTGTGCGGTGATTGTAA 2106496 29 100.0 32 ............................. GCCGTGGCCATGACGCCGGCGCAGCGCCAGAT 2106435 29 100.0 33 ............................. TCAGCTTTTGAGCGAACGATATCGTTCTCAGGC 2106373 29 100.0 32 ............................. TAGGTTGTGCGCCAGCAGTCATGCGTGGCCAT 2106312 29 100.0 32 ............................. GTCAACGTAACATTGCCGCCACTGTAAGATCG 2106251 29 100.0 32 ............................. TATCGGCATTTCATCGAAACCAGACTCGCTCA 2106190 29 100.0 31 ............................. TACGAATATGGCGGCGACTGGGATGGGTACA A [2106162] 2106129 29 100.0 33 ............................. GTGGCGGTAATTATTGGGATCCATCTGGTGAAC 2106067 29 100.0 32 ............................. CGGGCTGCGTTTATATCGCCGGTTAACGCCGG 2106006 29 100.0 32 ............................. AGGTGTTTGCCGTGGTGGCGCTTAGGGGCGAA 2105945 29 100.0 32 ............................. CAGCTTTACGGCAATGTGGATCTGCTGAAACG 2105884 29 100.0 32 ............................. CTGATTGCACGCGGCGGGCCACTGCTTTTTAT 2105823 29 100.0 32 ............................. TTCGGAAAAACCAACGTCTCCCCATCGAGCGC 2105762 29 100.0 32 ............................. GCGCGCTAACTGGGTTGAAAGATTCGGTATCC 2105701 29 100.0 32 ............................. GCTTGGGTATATACGCGATCCCATTTCTCAGT 2105640 29 100.0 32 ............................. GATTCTCGGTTGCCCCTGGCAATGGTCTAAAT 2105579 29 100.0 32 ............................. TATTGGGCAAGATTGTGTCCATGCCATTTTAG 2105518 29 100.0 32 ............................. GTGGCGTAATGAAACTAAATAGATACCCAGTA 2105457 29 100.0 32 ............................. GCATTGCAGCCAGCGGATTTCTGATTTCGTCG 2105396 29 100.0 32 ............................. GCACCGGCGCAGACCGTTACCTGAAGCTGCGC 2105335 29 100.0 32 ............................. GTGACGCGGTAGAAATATGGGTTGGTCTTCAC 2105274 29 100.0 32 ............................. GCACCGGCGCAGACCGTTACCTGAAGCTGCGC 2105213 29 100.0 32 ............................. GTGACGCGGTAGAAATATGGGTTGGTCTTCAC 2105152 29 96.6 32 ..........................A.. TTGATGGATGTTGCATCGGGCGCTTTGGAGGA 2105091 29 100.0 32 ............................. GCACGATTATCGCGCTATTACGGGCTGTTACA 2105030 29 100.0 32 ............................. CTGGCGTTTCACATGACAGGCCGCGTGATGGT 2104969 29 100.0 32 ............................. GAGGAAGAAGACGACGAAGCAGCCTTTACCGC 2104908 29 100.0 32 ............................. GCCGCCAATTCTTTTTGCGTCAGGCCGAGTTG 2104847 29 100.0 32 ............................. CGATTATGAGACCCTTGATAGGGCTATATAAA 2104786 29 100.0 32 ............................. GTGTCACGCTGTACAACCCGCGCACCATCGAA 2104725 29 79.3 12 .................ACC.T.G....C CATACGCGGCAA A [2104703] Deletion [2104685] 2104683 29 100.0 32 ............................. ACGAAATCCGGGCTTTCTCTGAGAAGGCGCAG 2104622 29 100.0 32 ............................. TAGATCGCATTGCATCCGGCGTTATGACAATA 2104561 29 100.0 32 ............................. TTGATAAGATCGCTGTTGATATCGCACAGCAG 2104500 29 82.8 0 ............T.........GG...AA | ========== ====== ====== ====== ============================= ================================= ================== 38 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : ACGCCGCGTTCAGCCCGGTAGACGTGGCCGGCGAAGACCGACAATGGGTGGCGCTGGCGCCGCTGGCGGTAGACGAAAGCCTGCGCCGCCAGGGGCTGGCTGAAAAGCTGGTTTACGAAGGCTTGGATTCGCTGAACGAATTCAGCTACGCCGCGGTGGTGGTGCTGGGCGATCCTGTTTACTACGGCCGCTTCGGTTTTAAACCGGCCGCCGCCTATGGCCTGCATTGTCGCTGGCCGGACACGGAAAGCGCGTTCCAGGTCTACTCGCTGGCGGAAGACGCCCTGAATGGCGTCAGCGGCGAAGTGGCTTTTTCGGCGCCGTTTAATTGCTTTTAACTTGTTGATAATTAATTTTAATTTGGTGGAAAAGGATTTCACCGAAGTGTATTTCAAAATTTGATTATAAATCAAATGGTTGTGTTTTTTCAGAAGGCGAAAATATTTGGTAGGATTTAAGGTCTTTAAAAATACATTTTAATTCAACCATATACTCTAAGA # Right flank : TTGAACGCTCGCAATCACATAGGCAGCTTTGAAATGCAGGGGGAGGAAAAAACCACGTAATGAAATCTGTTAACCAGGAAGCAAATACGCCAACGACAGCGGCGGGTGATTCACCAGCCGCTCTTTTTGTATTTTGCTCAGCTGTTTGACGCGGTATTCCAGCTTCAGCGCCGTTGAGCGATCCCCCACCTGGCAGTGAAACGCTAGCGTCAGCTCCCCTTTACCGCGCAGCGCCTTGGCGCCTTTGCCGGCTTGATGTTGCGCCAGGCGGCGCGCCACGTCGGTGGTGATGCCGGTATACAGCATGCCGCTCGGTAAACGCAGCATATAGAGGTGCCAGTGGGGCAAGTCCATCATTGGGGTCCTGTGCAAGGGTAGAAACGACATCAGGCCGCCATAGCCAAGCGCGGTATCTCTATTTTGTCACGATTTAACGATGGATTTCACCACTGGCGGAACGGTTTGTTTATTCTGTCTTGACGATAAAGGGTTATTTTACA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //