Array 1 526391-525493 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP025240.1 Phocaeicola vulgatus strain MG01-10 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 526390 33 100.0 33 ................................. ACTTCTGAGTAATCTACAAAATTAGGTTCTACA 526324 33 100.0 34 ................................. GTTGATGATGGAAGAGATGAATGAGGTTCATGAC 526257 33 97.0 34 ................................G GTCTTCGGGGCACACCATTGCTGTCCAATATCCT 526190 33 97.0 33 ................................T TGTAGTTTTTTTTGCACCAGATGAAACTGATAC 526124 33 97.0 33 ................................G TTTTTTAAAGATGAGGCTATCCGTTTGGGTAGT 526058 33 100.0 35 ................................. ATTAGCAAGAGTTGGAATTATGTCATCTAAACCTT 525990 33 100.0 33 ................................. TGAAGTGGCTGCCGCCGGAGGTATGTGCCGGGG 525924 33 97.0 32 ................................C ACCGCCTCCTGTCGTGCCTGTATCACTCCAAA 525859 33 97.0 34 ................................T AGACCTGTTTAGCATTAACAACCAGTATGCACCG 525792 33 100.0 32 ................................. CAAACTTGACGGATAAGAGGAATGATAACAAA 525727 33 97.0 34 ................................T CCCAGGACATAACTATAGAAGGCAGGAAATACGC 525660 33 93.9 34 ...........T....................G GTCTGTATGTCGATGAGCCGGATTTCTTCGGGGA 525593 33 100.0 33 ................................. CCTTCGACTACCTGGAGGAGATACCTGCACATG 525527 33 93.9 0 ....................A.........G.. | TA [525504] ========== ====== ====== ====== ================================= =================================== ================== 14 33 97.8 33 GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Left flank : ATATTGACGATTATCCGGTATTTCTTATAAAATGATTTTTAATTATGTACATTCTTGTGACTTACGATGTGGATACTACAAGCAAAGAGGGGGCTCGCCGTTTACGATGTGTGGCCAAGGCTTGTCTGGATTATGGACAGAGGGTGCAGAACTCAGTCTTTGAGTGTGTAGTGACGGAAGCGCAATATTCTCTTCTAAAAGGGAGAGTTAGGGATATTATTGATATGTCTCTTGATAGTGTTCGTTTTTATATTCTTAGTAAAAATGAGAATAAGAGGGTGGAAGTAATAGGTGTTGAAACGGCGTATAAACTTGAGGAGGCTCTTATAATATAATGCGAATGTGGTGTGTTACAAAAAAAGTAGTATCTTCGCATGTGTTAATAATCAGTAGATTAAATTATTTGTAAAGTATTTCTTCGTTATGAAGTTGAATAATAATGATGATTCGCATAACAGTGGATTAAATTTGCTGATTTATAATATGTTATTAGATATAGA # Right flank : TTGTTCACTCGTTGGTCAAGTTTATGGAAGAATTGTAAGCATTCGGCCTCTTGTGTATTTCTCTTCAAGCTGTTATAAAGTCAAAAGCCAAACGAAGTACGTTAGGCTTTTGACTTTGTTATGACTGGAAAAAACACGCACAATCCCGGATGCTTATCTTTTGTCTGTCTTCTTTTGTGGTTTCACCTAGGTGACAATACATTGGCATCTAAGTGGAGAGGCGTAGTCACCCAAGTGATACGCTTGCTTCACCTTGGTGAAACTATAAATTCAACTAAGTGTTTCAAAGCAAATATATTATATTTTTACTATACTATCCCTTGTTGCTTATTTGTTATATTATTGATTATTAATGTGTTGTTATCTGTTTGTATCGATTGTTTTTCTTATCTTTATAAGATATATTAAAACATAAACTAACATGAAAATTGGTATAATTGACCTTTGTAAACAAATAGAAGATCCTAGTATGAACCGCAAGAAAGTCCATAAAATGGAAA # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //