Array 1 38298-43312 **** Predicted by CRISPRDetect 2.4 *** >NZ_PREP01000001.1 Acinetobacter indicus strain IHIT32862 NODE_1_length_313463_cov_102.398, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 38298 28 100.0 32 ............................ TTGCCACCAGTCCAGTTGCCCGGATCGCGTCG 38358 28 100.0 32 ............................ AATCAATCAACGGATAGATCCGAGTGAATTTA 38418 28 100.0 32 ............................ TAAACGATATTCATGCGTTCTGTAATAAACAT 38478 28 100.0 32 ............................ TGAATGCTACGCAAGCGTATATCAGAGCAGGG 38538 28 100.0 32 ............................ ATCACTCAAAGCATCTGCATGATGTCTGTGCA 38598 28 100.0 32 ............................ AACATCATCTCGATAATAAATACGCGCTAAGA 38658 28 100.0 32 ............................ TGACATGGTCGGGCAGACTCTACCTATATTTG 38718 28 100.0 32 ............................ ACTCACGGTCATCGTATGGGAAGCCATGTCTG 38778 28 100.0 33 ............................ TGCATTATCAACTTTCATATCCTTCACCTTGAT 38839 28 100.0 33 ............................ CGCGTGATCATTTTCAGCGTTAAATTCCAAAGC 38900 28 100.0 32 ............................ TAAACGGCGGCTCATGGAAAATCGTCACAGAA 38960 28 100.0 32 ............................ TGTAAACGTGGCTTTAAAATACTCAGGCTTCA 39020 28 100.0 32 ............................ TGTTTGTAGGCTTGGAAGGCTTGTTCTGGTGT 39080 28 100.0 32 ............................ AGAAGAAATAGCAGGGGATGCGATCACCATGC 39140 28 100.0 32 ............................ ATGCGATATTTGCGCGACTCGACTTCGATATT 39200 28 100.0 32 ............................ GCATATTGCAGCGTGGCCATTGCGTTGGCATA 39260 28 100.0 32 ............................ TTCTGCACTTTATACTCCTTGCCTTTATATAT 39320 28 100.0 32 ............................ TTTAGCAACAAGAATCTGCGCTTGTACGTCAC 39380 28 100.0 32 ............................ CCACCCAACCGTAGGTGATTGCATGTCTAGCG 39440 28 100.0 32 ............................ ATGATCGCAGGCATGGCTTCGGGCCACTCTAT 39500 28 100.0 32 ............................ ACTTTTTTGAAAACAACTCCATTTCACAATTG 39560 28 100.0 32 ............................ TTTTGTCTTAATTTGATTCTAGTTTAACTTTT 39620 28 100.0 32 ............................ TAGTAAGTTTTGACCCGTACCATCGCCATTTA 39680 28 100.0 32 ............................ ACCACGCACACCGACACGCATGATTACCTCGT 39740 28 100.0 32 ............................ ATCGGCGCAGGTGGCGGGGTAGATTTCTTTGA 39800 28 100.0 32 ............................ AACAAGTATCTTGGTTGTACTTGGGAGTTTTT 39860 28 100.0 32 ............................ AAGCGAAGAATAAGCACCAAGGAGTTTGCGAT 39920 28 100.0 32 ............................ ACTTCATTTGGGTTTCGCGTCTTACCAGTAGC 39980 28 100.0 32 ............................ AATTCGCATCAAAGCCGCGACCAAAAATATTG 40040 28 100.0 32 ............................ TCCCAGTCTGGGCAAGCGGTTGTCCATTCTGG 40100 28 100.0 32 ............................ AACACTCACAAAGATGGACTGCGTTAAAGCTC 40160 28 100.0 32 ............................ TGACCACCCATCACAGGTGCATGCATGTTTAA 40220 28 100.0 32 ............................ AAGAATGGCAGCCTGAGCAGCCGAATGATGGT 40280 28 100.0 32 ............................ TATTGGCTCCACCGTATCGAAGTCACACCCGC 40340 28 100.0 32 ............................ TTTTCGAGATTTCAATTCTTGTCGATACCATT 40400 28 100.0 32 ............................ AGTACGAACATATTTGGCTTGGCAGACCTAAA 40460 28 100.0 32 ............................ AATGCATTTGATGGGTTGGTACCTGCTGTGTT 40520 28 100.0 32 ............................ ACTGCTGCGTTTTCTTCCTTGGTTTGCTTGCC 40580 28 100.0 33 ............................ AGCGTGATTTTATCGCCTTTCTTTACCTTTTGG 40641 28 100.0 32 ............................ AAAGCCATCGAAAGCATCAACAATAAAAGCAC 40701 28 100.0 32 ............................ TTCTGTCGCAAATACAACGTCGTGGCGCAGGC 40761 28 100.0 32 ............................ TACCAACAACACAAAACAATTCAGCTTTAACC 40821 28 100.0 32 ............................ GCTGAAGATATGAATGAAGTGATGAATGCTTA 40881 28 100.0 32 ............................ GGCATTGCGGTAAATTGATTGAATCTGTTTTT 40941 28 100.0 32 ............................ AGCAGATCGGGCCGCTATATGGCCGTGCGCAA 41001 28 100.0 32 ............................ ACTAGGCAAGAATGAGTTTAAGCGCTGCGATT 41061 28 100.0 32 ............................ TTTATGTTGATTCTCATAGCACACTCAATGCT 41121 28 100.0 32 ............................ TAATATAGCCAAAGCCATTCAAGAAGCACAAA 41181 28 100.0 32 ............................ AGCCAGCATTAACCGCTATTTCAGCTTTATTG 41241 28 100.0 32 ............................ AATTGGAACAACAAAATATCCAATTAGTTAAA 41301 28 100.0 32 ............................ GATGTAATCTGAGATACGATTATTGCGTACCG 41361 28 100.0 32 ............................ ATACTGCTCAAGCCACTGGTGCGCTGAACGCT 41421 28 100.0 32 ............................ GTAGCGCCTGTGTCTACGATGTCGTCACTTTC 41481 28 100.0 32 ............................ TAAGCGACTGGCTGAGATTCGTAAGCTTCCGT 41541 28 100.0 32 ............................ AGCAGGTGACCGCTCAACTTTAATCACAAGCA 41601 28 100.0 32 ............................ TTAATCAATTTTTGGAAAACTTCCGCTTGAAG 41661 28 100.0 32 ............................ TGATAGCCAGGCTGCTCACTCGAATAGTTCGG 41721 28 100.0 32 ............................ TAACGCCTAAACAGCAAAGGTTTGTCGAAGAA 41781 28 100.0 32 ............................ GTGTCCGATACGTGCCGCATTATCATGTTTGT 41841 28 100.0 33 ............................ TGCCTGAACAAATCAAGGCAGCGAATCCAATCA 41902 28 100.0 33 ............................ TGCCTGAACAAATCAAGGCAGCGAATCCAATCA 41963 28 100.0 33 ............................ TTCGATTAAAAGCCTGCAACTGCAAAACTTTGT 42024 28 100.0 32 ............................ ATTGCGCCCAAGTGATGCAAACTTAGACTTGG 42084 28 100.0 32 ............................ TGACCCCATTGGAGCGAATATCAGGCTGACAG 42144 28 100.0 32 ............................ ATTACGTCAAAAAACAGCAAGACCAAGCAGAT 42204 28 100.0 32 ............................ TTGTTGTTCGTAAAAACGATGAATTATGTATC 42264 28 100.0 32 ............................ TTAGCAGGATGCCACCAAAAGCCTTACTTCGT 42324 28 100.0 32 ............................ ATTCCAAAAACCGCTAATTATTGTCTTAAAGT 42384 28 100.0 32 ............................ AAGAGCAGCTTGAGAAAGTTCAACAAATGCCG 42444 28 100.0 32 ............................ AGCCTTCGCAAATTAGAATCGTGTGCGTCAGT 42504 28 100.0 33 ............................ ATTGATTGCTCAACAAGTGGACGGCCTTTGGGC 42565 28 100.0 32 ............................ ACCAGTGTTTATATTTGCGTCGCCTTCAATAA 42625 28 100.0 32 ............................ TGGATTCGATAGAGAGTGTGACGGTCCGGTGT 42685 28 100.0 32 ............................ CTGCATGGATACCAACTGCCCTGCCTTATATA 42745 28 100.0 32 ............................ ATATAGATTCCTAACAGAGCATGAGGATATTG 42805 28 100.0 32 ............................ ACGGTGAATACTTCAAATTTTCCAGTGAAATG 42865 28 100.0 32 ............................ CGCGAGTAGCATTCCACTGACTGCAGCCAACA 42925 28 100.0 32 ............................ TATCAGTGTTTATTTCCCCATGTCCATCTTTT 42985 28 100.0 32 ............................ TACAGCGGCAATCTGTGCGTTATAGAAGCGTC 43045 28 100.0 32 ............................ ATTGATGCAAACCTTTTCTGCTTTGCTTGAAA 43105 28 100.0 32 ............................ ACTTAATATTGTTTCGGGTCGTTATAACAAGT 43165 28 100.0 32 ............................ CTGCTTTAATTTAAACGCGCCCTACGCGATTA 43225 28 100.0 32 ............................ TCAACATTAAGACGTTATGGTGTTGATCCAGC 43285 28 92.9 0 ............A...........A... | ========== ====== ====== ====== ============================ ================================= ================== 84 28 99.9 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : TAGATATCCGAAAATGGCTAGAACGTTTAGAAGATTATGTGCATATCACATCAATTCGTGAAGTACCTAGCGATATTAAAGACTATGCCATTTACAAGCGTAAACAAGTGAAAACCAATGCCCAGCGTTTGGCACGGCATCGTATTAAACGTGGAGATATTGGTTTTGAAGAAGCATTAGCACGATATAGCAATGTGGTGACAACCACTGATTTACCCTATATCGAAATGCAGAGCTTAAGCAGCTCAGATGAGCAAAGCAAAAAGCGTTTTAAATTGTTTATTGAAAAACTTCCCGCTGAAAAATCTGAAAATCAGGTTTTTAGCACCTATGGTTTAAGTTCGGAAAGTGCTGTACCTGAATTTTAACCCGATATTTTTTTGACTCTTTAACAGCTTAATAAAATCAATGAGTTATGATGGTGAGTTAAAACTTGGGTCTTTTATAGGTTTTGGACTTTAACTTACTGTTATAACTTTATTTTTTGTTTTAAAATTACT # Right flank : ATATTTAAAATGATTCATTCAGAAAGGGGGCTAGAAGAATTTATGCTGAAAATTTATGGTGTGAAGCAAAATTAGTTTAAGAGAGTTCCTTTTTTAACAAATACTTAGTATCTTATCTCCACCATAAATGGGGGAAATATAATGAAAAAATTAATTTTAGCTTTAGCTATCGGGGTTATTTCTACTGCTGCAGTTGCTGAAAAACCATTAACTTTTAGTAAAGGATCGCCTGCTGTAATCGGTACCAGTCCAGATTATGTACATCATGAAAGCAGCTCTCAAATAAATAATACAAATCAATTTTCTATTGCGCTTGGCTATGCCGGATCAAAGTTAGGCTCTGATGAATTTCTCGGAACCGAATCTTTTGATGGCTTATTTGTGAATGCTGCTTATCAGGTACATCCTAAAGCCAGCCTTTGGGCAGAGTATATGTTCCAAAGTTCAGATATTGACTACAATCAATTTGCATTCGGTTATAAATACAAATTTCTGGAAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //