Array 1 41027-41360 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHOS01000007.1 Acetobacter sp. DmW_125133 NODE_7_length_110141_cov_2.999927, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 41027 29 100.0 32 ............................. CCTTGGTGGCGCCCTCAATATGGGGATGGGCA 41088 29 100.0 32 ............................. ATACCTACAGCCTGACAGATCTGCTGCCTGAT 41149 29 100.0 32 ............................. GCGTGAGACAGCGCGTGGTGGCTGAGGAGGCT 41210 29 100.0 32 ............................. GAACACCCGCGCAGGAGAGAAGGCGTGAAACA 41271 29 100.0 32 ............................. GGAACCACATGGGAACCGCAGGAACCTCGCTA 41332 29 96.6 0 ...........................T. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 99.4 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : ATGTGCTGGCTGCCGGTGAAGCGGGGCCGCCACCAGTGCAGAAAGAGGCGATGCCCGTTGCGTTTGCTGATCCGAAAGGGCTGGGTGATGCTGGTCATCGTGGTTGAAAATGCGCCCCCGCGTTTACGCGGGCGGCTGGCTGTATGGCTTCTGGAAGTGCGGGCTGGTGTTTATATTGGCAGCTACGGGCGGCGTGTGCGGGAAATGATATGGGGGCAGGTCTGCGCCTATATTGAAGATGGCAATGCTGTGATCGCTTGGGCGGCTCCAAATGACGCCGGTTTTGAATTTGATACTTGTGGGGAGAACCGTCGGGTGCCGGTAGATCTGGATGGTTTGCGGTTAGTTGCTTTTGGTCGTGAAGCAGCTCTTCCGATGCAACCAGGCCCTGCTGTAATGACCCTTCCAAGACGGCGTGGAAGAGGGTAAAAAACAGTCATTCGTCTGGTAGATTCTTTGATAGTAAAATAATGTTTTAAAATCAATTGGTTCCACAAAGA # Right flank : GGTGAAACCCTTACTCTAGTGGAAAAGGCATGGGGGTTACCGAGCAAGTGGGTAATCGGTATAGCCTTCTGCCCCCTGTGTGTACCAGGTTTGGATATCATCCTTATTCAGGGGAAGGTTATCTTCCAGACGGTGCACCAGATCCGGATTAGCTAAAAAAGGTCGGCCAAATGCAATGGCATCGGCAATACCGGTTGCGACCGTTTCAATCGCTTCGTCCCGTGTGTAATCCTGATTCAGAACCAATGGTTTTGTAAAAACTTTGCGGATCGGAGCATGCAGCTTCGGCTGATCGGTCTTGCCAAATGTGCCATGAGGGCCGGGCTCGCGCAGTTCGAGAAATGCAATATCGAGATCGTTCAGAAGCTTTGCGGCGGGTACGAAAACCTGATCGGGATGGGTGTCGATGCAGCCTTGTGTATTGCCATTTGGTGAAAGCCTGACAGATGTTCTGTCCGCGCCAATCGTGGCGATTACTCGTTTCGTGACTTCATGCAGAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 101459-102158 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHOS01000017.1 Acetobacter sp. DmW_125133 NODE_17_length_191963_cov_2.999125, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 101459 29 100.0 32 ............................. GATCTCGTAGGTTGGCGAGAGAGGCCTTGGTG 101520 29 100.0 32 ............................. GGTATCCCGCAAATGGCAGCCGGATTTCAGGA 101581 29 100.0 32 ............................. GTCAGCGTGGCGCAGGAAGTTGACCAGGCACA 101642 29 100.0 32 ............................. GAATGCGCCATCAAAGCAGGCGTGCAGGCAAA 101703 29 100.0 32 ............................. GCCAAGGCGCTTTCAACTCTGGATGGTGGCAC 101764 29 100.0 32 ............................. CTGGCAGCCAGATCGCACCACAGCACAAATTG 101825 29 100.0 32 ............................. AGGAACGCGCTGGGAACAAATCCGCATTGCTG 101886 29 100.0 32 ............................. GCTGAGGCGCGTGGCAACGCTGTCATCATCAC 101947 29 96.6 32 ............................T TCAAATACCTTATATGATCTGAATTTATCTAT 102008 29 100.0 32 ............................. AAAATCTACACCAACGGAGACGCGCTGCAACT 102069 29 100.0 32 ............................. ATAGGCAGGAACACGAAACGGCGCACGCCACG 102130 29 96.6 0 ........T.................... | ========== ====== ====== ====== ============================= ================================ ================== 12 29 99.4 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CACTTATACGAGTTGCAAAGCCGGGAGGGTACATTTGGCTTTCATCTGGGGCGTAAAGCACGTCCACTTTGCCGGTATTGCGTAGCAGGCCAGCATCATCTTCCAGCCCGCGCGGGTAATGCTGGAAATCATTGGTGTTGTTGAATTGGATAGGATTTACAAAAATGGACACAATTCGACGGGAGGCTTTGCCATCCAGCGCATTTATGAGTGAGATATGGCCTGCATGAAGTGCGCCCATGGTCGGCACAAAGCCAATAGTCTGGCCATCTTTCCGCCAACTGGTGCTGAGTGCTGCCAGTTCTGCTTTGGTTTTTACAATCTGCATGATGAATCCTGAACGCCAGTAATTTAGTCAGCCGGAATAAGTGTTCCAAACTGCAAAGTGCTGCAATGTATCCATGAATGTGCCACTATTCCAGAAGTGGCTGGGCCCTTTTATGGTTGGTGGATTCTTTGACAGTAAAATAATGCTATGGAATCAAATGGTTCCACAAAGA # Right flank : GGCTGACTCCGTAAATAAGGTCGTGCTCGTTGGGTGTTCCCCACACGCGTGGTGACTAGCTTGAAACAAAACTTTAGGTAGAGTGAAAAGCTTCCAGTCTGTGCTATAAAGACGCATGTCTTACGCTGATTTTGTTCATCTTCGTGTTCATTCTGCCTATTCGCTTAGCCAGGGGGCCATTCGTGTGCCCGATATTGTGGGGCTGGCGAAGGAAATGCACATGCCTGCTGTGGGTATTGCAGATTCAGGCAATCTGTTCGGGGCGTTGGAATTTTCTCAGTATTGTACCAAAAGCGGTATTCAGCCTATTATTGGCAGCCAGATCGGCCTGCCTGCGCGTAATGACAAACCCGGCGCCCCCGCCGAGCCTGTAGTGCTTCTGGCACAGAATGAAGCAGGGTTGGCGAATCTCCAGTTTCTTTCTTCAGCCGGGTTCCAAAATTCAGATCCGGCAGACCCTTTTGTTTCTCTGGATTTGCTATGTGAGAAAGCAGAGGGGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //