Array 1 27379-28140 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDRJ01000053.1 Bacillus sp. 275 strain DE0466 NODE_53_length_28198_cov_53.435934, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 27379 36 86.1 30 .....T......T......C..G..........A.. TGGAATGCCTCTGGGGGATGTGATTCAGTC 27445 36 100.0 30 .................................... GAAAACCGAAGAAAACATGGACGGGGAAAG 27511 36 100.0 30 .................................... ATTATTAACGAATTAAAATCAAACAACCAA 27577 36 100.0 30 .................................... TTTTGTAGAATACGAGAATATCTTCATGCC 27643 36 100.0 30 .................................... ACTTCATCATGCGGTAAAACCCAAGCTCTA 27709 36 100.0 30 .................................... CCAGACGTTCCGGGAAATTGATAATTACGT 27775 36 100.0 30 .................................... TCGGAGATTTAACGTTAGCGCTCGTCTTAG 27841 36 100.0 30 .................................... TCGGAGATTTAACGTTAGCGCTCGTCTTAG 27907 36 100.0 30 .................................... GATTAATATTACGAATACAAACGAACTGAC 27973 36 100.0 30 .................................... GTATGGGTATTGAATTTGTAAATGAGTATA 28039 36 100.0 30 .................................... GATGATAAGAGATGAACGAAAAACTAGCAT 28105 36 86.1 0 ...............................CCTGG | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 97.7 30 GCCATAATTCCCCTGTAAATCTTGATGTGATATGAT # Left flank : CAAATCGCGCCCGGAAATTTTCTCACTGAAAACCTCATACATAAATTCATAAAACAGCCTGTCCGTTTTAAGGATAGCGTACAGTACGATCAATTTACTTGTATGTATGTCAGTAGTTAAAAGCTTCCTAATGAGGTAATCATCCAGCACTTTTAAACGTGCCTTTATGGCTGAAGCAATTTCTCTTTTGCGGGTTTCAGTTTTGACTTGAAAGATATTTTGGCTGATAACTTTCTCTTTCAATTCGAGTTCATTCAACCCCTTCAAATGCAGTTCTGCCAGCATTTTGGTCTCCTTGTATAAGAAGGGTCGTGACTTGATGGTAGAGCTGTACTTTAATCCTTTTTCCATATTATCCCTTTCTCATGGTCCAGTATTTAGTTCCATTTTATCATTAAAATGTGCGCTGGCGGAACGGTTTTTTTGACAGTTTTAGCAGTTACTGAAGGGGCAAGCTTACCTCCAAGAAAAAAGAGATGAAACTCCAATTGACAGTTATC # Right flank : ATTACGAAAGTAAAATCTAGTTATTAAATACAAAAAGGGCTCCAGCCTTTGGTATAAT # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCATAATTCCCCTGTAAATCTTGATGTGATATGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [5-5] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 6154-8654 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDRJ01000091.1 Bacillus sp. 275 strain DE0466 NODE_91_length_8727_cov_50.809095, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 6154 32 100.0 33 ................................ TTTTAATATTTCAACCTTAGTTTCAGTATCCCC 6219 32 100.0 35 ................................ ATTTCATAGAAACTCATACCCGTTGAAGTTATACC 6286 32 100.0 35 ................................ ATGTTAGCGACTTCAGACAACCTACAACCGGTTGA 6353 32 100.0 35 ................................ ACCATCTTGATCACCTCCTCCTGTGTGCAGGAATC 6420 32 100.0 35 ................................ TTGTCTACACCGAGTTTGCCTAGCACCCAGTTAAC 6487 32 100.0 35 ................................ TCAAACTCCTGCTCCATGCCTTCCAGGTCCTTGAT 6554 32 100.0 36 ................................ ACCTTTGAACTCGTTACCTTTTCTTGAACCCTGACC 6622 32 100.0 39 ................................ TTTCTCAAGGACGATCCAATAGGCGCATCCATAATGCCA 6693 32 100.0 36 ................................ ATTAGCAATATATTTTGGCATGATTTTGCCCTCCTT 6761 32 100.0 35 ................................ TACTACTGTCATAACCGCGCCGAACCCCGAAATAA 6828 32 100.0 36 ................................ CTCGTCAGTAAAACGTATTGCGAATACAACTTTATC 6896 32 100.0 34 ................................ ACAAAAATTCACGCAGATCTTATGGAGTACAGCC 6962 32 100.0 34 ................................ AAAATATTGACGAGATGCTTACTTCGAACGGACT 7028 32 100.0 35 ................................ ACCGACACGCTCGCGAAAATTTGGCAGACGGTACG 7095 32 100.0 34 ................................ CTCGCCGAGTGGTCGGTGCCGAAAGTAACCTATC 7161 32 100.0 34 ................................ TTCTAATTCGATAGTAGAGCCGATGGGGTTACGA 7227 32 100.0 35 ................................ AACTCGGCAATCGGGAAGGCAATAAGCCTCCGCAG 7294 32 100.0 34 ................................ TTCGTAATCCCCGTCGTGGAATTTATCGATTGCT 7360 32 100.0 33 ................................ CGTTACATATCGGCGCGAGCTTTCATTCCAAGC 7425 32 100.0 35 ................................ TATCCTTGAAATCTACGAGCCCTACAGAAATATGT 7492 32 100.0 34 ................................ CAAGAAGACGGTGATCCTGTACTTAAGTTTTTAC 7558 32 100.0 34 ................................ ATACTTGAGTTTTCATTGATGGACTTAAGGTAGT 7624 32 100.0 36 ................................ TATACGAGATTGGGCGTGATTTTCGAGAGTGGTTAG 7692 32 100.0 35 ................................ AAGGATGAAATCTACAACTAGAAAGGGGTAAAAGC 7759 32 100.0 36 ................................ CTGGTGTAGTGTAATTTCGAAAAACAGCCCTACCAT 7827 32 100.0 35 ................................ TTTGATTTTCTTGTTGTCATCTTGCAGTTGCTGAA 7894 32 100.0 34 ................................ TCTGACGTAGAGCCCCACCGTCATAAGCCAAACC 7960 32 100.0 36 ................................ CAAACGTTACTATTTCGTCGCCCCACAACACGTCCT 8028 32 100.0 34 ................................ CTTCCGGCTCATATTCGTAAACCGCTCCGATAAG 8094 32 100.0 33 ................................ GCTAATCCTTCGCCAGTCCAGCGTCCGATTTGA 8159 32 100.0 34 ................................ GTTAGAACACTCAATCTATTCAGCCCTTTTAATT 8225 32 100.0 34 ................................ AACCATCATTATTTGGTTAAAGAACTCACTCCCG 8291 32 100.0 34 ................................ TTCGGAAAACTGGAACAACGCCAGTCCGTCGGTT 8357 32 100.0 35 ................................ AATTTCGATGCGTCGAGGCTTTCAAACGGAATCAT 8424 32 100.0 35 ................................ CTTTTCGACATCTACCAAAGAGTCCTCAACTTCGA 8491 32 100.0 34 ................................ ATAGCGCCGTGTATTGCGTGTGACTTCGCGCTTG 8557 32 100.0 34 ................................ ACGTACCGATAATTTAAGTCCTCTGTTAGCTTTT 8623 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 38 32 100.0 35 GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT # Left flank : TGAATATCCACCATTTTTTTGGAAGTAGGTGAAAGAGTGCTTGTGTTAATAACATATGACGTCAGTACCACTACTCCGGAAGGTAGAAAAAGACTTAGGAAAGTCTCCAAGAAGTGTTTAGATTATGGACAAAGGGTTCAGAATTCCGTATTTGAATGTGTTTTGGATTCTACGCAACTTAAACAATTGAAATATCAATTAGAGGAAATTATTGATAAAGAAACCGATAGCTTAAGATTTTATAACTTGGGGAAAAACTATAAAGGCAAGGTAGATCATATAGGAGCGAAGGAATCTTACGATATAGAAGGAACACTTATTATTTAATTATGGTGCGAATATACAGCTCTCATACTTTTTCGTGGGGATTCGCACCCGAAATATCTTGGATTTGATAACGAATTTCCAGATAACTTCAAATGTATTCCTTTTTATGGGAATAAATAGCGAGTTTATGTGATTATTACCCTTTTTTTGGATAAAAACTCACTGATTTCGCT # Right flank : TCGACAGTCGTGTAAAGAATCACTTTGTTCCGTCAAAAACAGGCCTTCTTTATTCAAATTCCTTCAGCGTGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTCGTGAGTGCGTGGGTTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 18044-15039 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDRJ01000070.1 Bacillus sp. 275 strain DE0466 NODE_70_length_18144_cov_52.601737, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 18043 36 100.0 30 .................................... CTGCCGACAATGCTACGGATACCTGCGATA 17977 36 100.0 30 .................................... CGGCTTCATGCCCGTTTGCTCGTAATAGGA 17911 36 100.0 30 .................................... GGAGGCCCTTTACAATGAAAAAACTACTCT 17845 36 100.0 30 .................................... TAGGGAACTTGAGCAATACGAGGCGGAACT 17779 36 100.0 30 .................................... ACGATTTCTTTATCGGATTCCCACGGCGGA 17713 36 100.0 30 .................................... CATTAATCTTTGCTTTTCTTCCGGTGTTTT 17647 36 100.0 30 .................................... AATGCTAGTTATGTAACAACAGGTTTGTTA 17581 36 100.0 30 .................................... TTAGGCGGGAAGTTAGCGAGGTCATTAGAG 17515 36 100.0 30 .................................... GATAGCCTTTCTCATATTCGTGTTTTTCTG 17449 36 100.0 30 .................................... CGGTTTTCAAACGGTACACCGGTGTACCAA 17383 36 100.0 30 .................................... CCTCTTGCGAATGTTCATCGGTCCAGTCCT 17317 36 100.0 30 .................................... GCAATTATGCTTAACACGGTTAAATTGCGC 17251 36 100.0 30 .................................... AAAAAATCCTTCGCAAGATGCTAGAGCTTT 17185 36 100.0 30 .................................... GGAAAGAGGATCAGAAGGACAAAAACTGTC 17119 36 100.0 30 .................................... TACTTTAATCGACCAAATCGCGCAGGTAAT 17053 36 100.0 30 .................................... CTTTCGTGGGGTTACAATCTCGCAGAATTA 16987 36 100.0 30 .................................... CGAAGCTAAGACGGTTAGGTGCGCTCATGT 16921 36 100.0 30 .................................... TGGCACGATGTCACATATCACACGATAGAA 16855 36 100.0 30 .................................... ATCATGTTGTATCGTTCTCCATCCGAAACC 16789 36 100.0 30 .................................... GTATAACTCGTTAACTCTTTCGTTGCAATA 16723 36 100.0 30 .................................... AATCAGTCGGAACAAACATCGTAAAAGATG 16657 36 100.0 30 .................................... CTCCTTTAGTTCCTGGAGCATAAAGGTAGG 16591 36 100.0 30 .................................... GCGCGCTTTAAAGAATACCGCCCCGACTAA 16525 36 100.0 30 .................................... CCTCCTTCGGGAAATAGTCCCTTCACCCCT 16459 36 100.0 30 .................................... TAATACGAAGGTGGAAGCGAAAGGATTAGG 16393 36 100.0 30 .................................... TAATACGAAGGTGGAAGCGAAAGGATTAGG 16327 36 100.0 30 .................................... ATGCTGGATGAATTCGTGATCACGAAAAAC 16261 36 100.0 30 .................................... AATGTAAAAGGCATCTATTTAACGACTGGG 16195 36 100.0 30 .................................... CCGCTTTTGACACGTGTCGTCCAACCATAA 16129 36 100.0 30 .................................... GGATATTCGATGAAATCCATGAGTACAAGG 16063 36 100.0 30 .................................... TGCGGATTGGCTGAATGGTCTATCATGGAT 15997 36 100.0 30 .................................... AGGCGGATTGGAATATTCCTATTATCGAGT 15931 36 100.0 30 .................................... AATTGCAGGTGGGAAAGCTGGATTGACAGC 15865 36 100.0 30 .................................... ACAAGGGACAGGGAATGGTTTTATGAGGTG 15799 36 100.0 30 .................................... CCAATCCCACAAGGTGCGCCTGCCCTCGTT 15733 36 100.0 30 .................................... TGCAAGATAATCCATATCATAATTTTTTGC 15667 36 100.0 30 .................................... GAAAAAGAAAGTGGATCCACGTGAAGCTGG 15601 36 100.0 30 .................................... GGAACTTTCGGATTGAAGGTAAACCAGCGG 15535 36 100.0 30 .................................... GAAAATAGAATATGGGTATAAACTTTTTAC 15469 36 100.0 30 .................................... CATTCATATCAATAATGATCTCAATGAAAC 15403 36 100.0 30 .................................... AAGAAGAGAAAGAGATTGTCCTACCCAGTG 15337 36 100.0 30 .................................... TTGAGAGCATCCAGGGAGATGATCTTGAAA 15271 36 100.0 30 .................................... TCCAGCAGTGGTATTAAAACAGCGTGGACA 15205 36 100.0 30 .................................... AGAGGATCCGAAGTTCCTATTAGGAAACTG 15139 36 100.0 29 .................................... TTGGTTGCAACGATGTAAACAAAAAGAGG 15074 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 46 36 100.0 30 GCCATAATTCCCCTGTAAATCTTGATGTGATATGAT # Left flank : TTCAGGTTTTTCACCGGAGTTAATTTGAAATTAGGTGTCTGAAATAATGTGCTAGTTTACAGTGATATGATTAATGCATCCACAATTGCGCTTGGTGATT # Right flank : ACATGGCCGCAAAACCCTTGATTCCTCCCCGTTTCAGGGGTTTTGTATTTCCAAAAAAGAAGGATTTATCCCTGGGATTTATCCGCTTTGTTTTATTTTTTATAGAAATAACTGTAAAAAAAATACCTGCAAAATAAATTGCAAGTACTCTTTAAAAGAAATCTACTTTTTTAACACCGAGTTCTTCTTCTGCTGTCGTTGTACCCAATAAAATCTCCATATTGGCAAATTGTTTCTCCGTTATTTTCATTGCTCGGATGGCCCCATTAACAGGGGGGAGATTCTCCTGCAATCTCTTCATATGTTTACGGACCGCATCCTCCCCATTGCAAATTCTTGTGTATACTGAATATTGAAGCATTGTATATCCGTCATTCAATAAAAACTTACGGAAACGAGAGTAGGCTTTTCTTTCCTTCGGAAGTACTACCGGCAAATCAAAGAAAACGATAATCCTCATGTATCTACTCATATGTATGTACGTTTAAATTGGTTAATTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCATAATTCCCCTGTAAATCTTGATGTGATATGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 95-1463 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDRJ01000009.1 Bacillus sp. 275 strain DE0466 NODE_9_length_89937_cov_57.704709, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 95 32 100.0 34 ................................ CGACAGCTTCCGTAACGATTACCGTGTTTTTGAG 161 32 100.0 33 ................................ TCGACTTGGAGGCGGCGGCTGGCTTCGAATCAA 226 32 100.0 34 ................................ ACCTGTGACGGTGTTACGCAAGACTTCGATTTGC 292 32 100.0 36 ................................ TTCCTTCGTTTCTTCCGTTTTTAACGACTCGTCAGT 360 32 100.0 33 ................................ TACTCGAGCTACTAACGCATTCCACTGTGCTTC 425 32 100.0 35 ................................ TGCTTGCCGTAGCCTATTCCGTATTTCGACTGCGT 492 32 100.0 35 ................................ GTCTCGCAAAAGATATATCCGGAAACAAATATGGC 559 32 100.0 36 ................................ GCTCTACCTATCGACGACCCGAAGAACGCGCATTGT 627 32 100.0 35 ................................ CGTCTCATACACATAGTGTCAGCATCCCGTCGCAC 694 32 100.0 35 ................................ TCCGGAAATGCTAACGTATATTCGGACGAGCACCT 761 32 100.0 34 ................................ CCTCCAGTTCAATGTATTTGATTATGGTCATGCT 827 32 100.0 34 ................................ AGAAAAATCCCGTTGACCGTATCTTTCGATTGCG 893 32 100.0 35 ................................ CAGTTCTTCGGCTCCCACTTCATCGAGAATAACCC 960 32 100.0 35 ................................ ATGATAATTACATCTTGGCTGGCGGCTCAATAGCA 1027 32 100.0 35 ................................ CCAATGGCGGCGGATGAGGTGATCATGGGAATCGG 1094 32 100.0 36 ................................ TTCAATCGACAGGTGCATGTCTTTCCACAGTTTCAT 1162 32 100.0 35 ................................ ACGGAAATCCTGCTTTGCTTTTTCACTCAAATCCC 1229 32 100.0 38 ................................ CAGAATATGAAAAGGCTACTAGAAAAATTTGGGTAATC 1299 32 93.8 35 ..........A......A.............. ATCTGAACGTAGTGGGATATAAAGGCGTGTTTGAC 1366 32 87.5 34 ..........C.A......T.......A.... GGTGTAAAGCCGGAGGTCATCGACGGTGCTTTTT 1432 32 75.0 0 .A....................TA...TTTTA | ========== ====== ====== ====== ================================ ====================================== ================== 21 32 97.9 35 GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT # Left flank : ATTTCAGGTTTTTCACCGGAGTTAATTTGAAATTAGGTGTCTGAAATAATGTGCTAGTTTACAACAGTCGGTCCGTACACAAAGTTTCCTAGCCG # Right flank : AATCAGTTTTTTTCTAAAATGAATCTTTTCCTCCCCTCACCCAGTATATATGTTTAGAATAATTTTTAAGGGGTGGCTGTAATGGGTATTTTATCAAGGTTTAAAGATATTATGTCGAGCAATATCAATGCATTATTGGACAAGGCGGAGAATCCGGAGAAAATGATCGATCAGTATATGAGAAACCTGAACAGTGATTTGGGCAAGGTGAAAGCTGAAACTGCTTCGGTTATGGCGGAGGAACAGCGGTCAAAACGGGCGCTCAATGAATGTTCGACAGAGATTGAAAAGATGCAGAATTACGCGGTCAAAGCCTTGGAAGCAGGAAATGATGATGATGCACGGAAGTTTTTAGAGAAGAAGGCCTCCCTGGCCGAAAAAGAAGCGGAATTGCAGCAGGCCTATAGTTTGGCAGCTTCCAATGCGGTCCGGATGAGGGAGATGCATGACAAGCTTGTTTCTGATATCGGCGAGCTGGAGGCACGCAGAACGATGATCAA # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTCGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTCGTGAGTGCGTGGGTTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 889-61 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDRJ01000149.1 Bacillus sp. 275 strain DE0466 NODE_149_length_991_cov_48.285560, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 888 36 100.0 30 .................................... AGCACGTTACAACAGACTTCAAAAAGTTTT 822 36 100.0 30 .................................... CTGCTATTTCATCATCGGTAACGCGCTTTT 756 36 100.0 30 .................................... AGTCATTAGTACGCAAATATACGGTAAAAG 690 36 100.0 30 .................................... CGGATTCGCTTCTCCTACGATGTTCTTAGA 624 36 100.0 30 .................................... CTTTCACCTTCCAAACCTACATTAGTAGAC 558 36 100.0 30 .................................... CAGCGGTTAAACTGCCCCTTTATAAATGCT 492 36 100.0 30 .................................... TGCAGGTTTTTAGCGGCCTTTTCACTGGCG 426 36 100.0 30 .................................... CATCTTGCCCCAGAACATCAGTTGCACATA 360 36 100.0 30 .................................... GCGACTTGAATCCGGTCGTTACGGTAGACC 294 36 100.0 30 .................................... GTGATTACCTCGTTGGATAAGCGCATTATA 228 36 100.0 30 .................................... TGATACTGTGTTAGGTGAGGTGGCTGTCGT 162 36 100.0 30 .................................... ACTGACTTTGTTGGGGTAGTTAATAAGACT 96 36 94.4 0 .................................TG. | ========== ====== ====== ====== ==================================== ============================== ================== 13 36 99.6 30 GCCATAATTCCCCTGTAAATCTTGATGTGATATGAT # Left flank : ATCACGCTGAAGGAATTTGAATAAAGAAGGCCCTTTTTTGACGGAACAAAGTGATTCTTTACAGTGATATGATAACGAAGGTAACATTTCAACAGTGACGCA # Right flank : TAAAGAATCACTTTGTTCCGTCAAAAATAGGCCTTCTTTATTCAAATTCCTCCGGCGTGAT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCATAATTCCCCTGTAAATCTTGATGTGATATGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 559-60 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDRJ01000167.1 Bacillus sp. 275 strain DE0466 NODE_167_length_661_cov_45.351171, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 558 36 100.0 30 .................................... GAAAAGTTATATGAGGAATTTAAAAAAGAG 492 36 100.0 30 .................................... CATGCTTTGCGGGATTGATGCGGCAACGCT 426 36 100.0 30 .................................... TCTGCAAAGTCTTGGACAGCCGCCTGCAGC 360 36 100.0 31 .................................... CCAACGCGGACAAGCGCCTTTTTAAGTTCAG 293 36 100.0 30 .................................... GGGCACTCCTGCTATCTCCTACTCTCATTA 227 36 100.0 30 .................................... TCGGGGATCCGGATGCTCTTTTAAAATATG 161 36 100.0 30 .................................... GTTTAAAGGGAAGATAGTTACATCTGTCCC 95 36 94.4 0 .................................TG. | ========== ====== ====== ====== ==================================== =============================== ================== 8 36 99.3 30 GCCATAATTCCCCTGTAAATCTTGATGTGATATGAT # Left flank : TTGTAAATTGTTCCCAAAAGAGCGCTGAATTAGTTTTCGGCAAATTTACTTTCGTAATTTGGGGTGATATGATAATGCTCACGAGTAGAACCTTTTTCTCCA # Right flank : TAAACTAGCACATTATTTCAGACACCTAATTTCAAATTAACTCCGGTGAAAAACCTGAAA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCATAATTCCCCTGTAAATCTTGATGTGATATGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //