Array 1 531351-532708 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZOW010000001.1 Streptococcus sanguinis strain KO9 Ssanguinis_KO9_Nina_Sia_YES_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 531351 36 100.0 30 .................................... TTTAATCCTGAGTTTAAAGAGTGGAACTAT 531417 36 100.0 30 .................................... AGTCATGCTAAATATCCATGGTCTACTAAT 531483 36 100.0 30 .................................... TAAATATTAGTGTATCAAAAGGTTGGCATA 531549 36 100.0 30 .................................... CTAACAGAAACAGGATAACCTAAATAGTTT 531615 36 100.0 30 .................................... TCGATTTTATTAATTTATCATATTCATAGT 531681 36 100.0 30 .................................... ACAAACTTACGAAACACACTATCAAGCTGG 531747 36 100.0 30 .................................... TTAAGAAATATTTTAAAGCTACGGATAAAG 531813 36 100.0 30 .................................... CACAAATCCAAATACATATGCAATAAGCCA 531879 36 100.0 30 .................................... ATATTCTCTTGCCTGAGAAATCAAGCATAA 531945 36 100.0 30 .................................... AATAATAAGCATTGGCTGAACCCAATTAGT 532011 36 100.0 30 .................................... TAAGCGTATCATTACTATGAAAGACCTCTT 532077 36 100.0 30 .................................... CTATCGGTAAGCAGGATAATAGTGAGAGGT 532143 36 100.0 30 .................................... AAAAGATGGCGATATTTATTTCAGTGCTAT 532209 36 100.0 30 .................................... AATAGAAATCATATTCTTACGTTGCTTTTT 532275 36 100.0 30 .................................... TTTATGCTTAAACCCCGTGTTACAGGAACG 532341 36 100.0 30 .................................... AAACATGTTAGGAATTGGGATCACTCGTTC 532407 36 100.0 30 .................................... ATCTGCTCGATTTCTTGCATCTTTCGTGCT 532473 36 100.0 30 .................................... CGAAAATGTGCAGCAGTGGTCAAAAGACCG 532539 36 100.0 30 .................................... TCTTAAGTCTGGAAAATATAATAAACTGGT 532605 36 100.0 30 .................................... GCCGTCTGTGAGGGTGAAACCTGTCAAAGT 532671 36 83.3 0 ......................TT.T...AT....A | TT [532693] ========== ====== ====== ====== ==================================== ============================== ================== 21 36 99.2 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAACTTAATGATAAACCTGAAGTAAAGTCAAAAATCGAACAGTTGTTAGCTGAGATTACAGAACTGCTGGGATTTGAGTGTTTGGAAAACGAATTGGATCTAGAATATGATGAAATCACTATCCAAGAACTGATTGATGACCTTGGTGTCAAAGTCGAGACCATGAGCGACACACCTTTTGAAAAAATTTCAGAAATAATTCAAGTCTTTAAATATCTCTCAAAAAAGAAACTACTAGTCTTCATTAATGTGGTAGCTTATCTATCAAAAGAAGAGTTGGATAGATTAATCGAGTATATACAACTAACTCAACAAGATATTTTATTTGTCGAACCTAGAAAAGTCTACGATTTTCCGCAATATGTATTGGATCAAGACTATTTCTTAAACCCTGAAAATATGGTATAATAAGAGTAATAAATGGAATCAAACGAATTGAAGTCTAGCTGAGATAAATAGCGCGATTACGAAATTTCGTAAGAAAAATTTTTCTGCGAG # Right flank : AGGACTGAGTAAATCAGTCCTTTTGTTCTCTATTTCCCCAAGCAAAATTGGCTGAAGAGTTGGGTGATGAGTTCGTCTGGTGCAGCGTCACCAGTGATTTCGCCGAGGATTTCCCAGGTGCGGGTCATATCGACTTGGAGAAGATCTACCGGCATACCCATTTCCAAGCCTTGGTTGACGGCTTGCAAGCTTTCCAGAGCTTTTTCAATCAAGGAGATATGGCGGGCATTTGACAGGTAGGTGGCGTCTTGCTCGACGATACCAGCATTTTCAAAGAAGAGCTGATTGATGCGTTCTTCAATTTTATCGATATTTTGATTGTGGAGGACAGAAATCTTGATGACATCAGTTGGCAGCTGGTCCAGCTCAATCTTTTCTTCAAGGTCAGTCTTGTTAAGCAGGACGATGCGATTGCTGTCTTGGCTGATTTCGAGCAATTGTCTGTCCTGATCCGTCAGAGGTTCGCTGGCATTGAGAACTAAGAGGACCAAGTCGGCTTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //