Array 1 2465832-2470082 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP013044.1 Tannerella forsythia 3313 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2465832 30 100.0 37 .............................. GTTACATCAATATCCACATAACAGTATTTGCTTCTTT 2465899 30 100.0 34 .............................. TGTCGTGTCCGCCATTACCGCGCGGGCGGCGATG 2465963 30 100.0 37 .............................. CTTTCGATACAAACTTGCTATGTATATCCGAAAACTC 2466030 30 100.0 35 .............................. CTTTTTAACTCAGAGATGTAGCCCGCATTTTTCAA 2466095 30 100.0 38 .............................. TAATGTAAGACTTGATGGTCGGAAATTTCTTACCAAAA 2466163 30 100.0 36 .............................. TTACTCCCGCTGTGGCTATGATGGATATTGTCGGGA 2466229 30 100.0 35 .............................. GTTGTTCCCATCGTGGTAGTTCCACGCAGACACTT 2466294 30 100.0 37 .............................. CGACACGTTCGGTCCTTACGGGGAAGTAGACTATACG 2466361 30 100.0 37 .............................. TCATGGACGTGAAGGGGCAAAAGATCAGCATTGCCCA 2466428 30 100.0 36 .............................. TTGAATGGTGAGCATTCGATGTCTTTGCAAATCCCT 2466494 30 100.0 37 .............................. TTGTTGGCATTTAACCAACTTATCGATTCTCTTGTAA 2466561 30 100.0 39 .............................. TCTCTCGTGTAATTGTAACACACAACGGAATCATACCCA 2466630 30 100.0 37 .............................. CTATAACCTCCGCCCGCACGGGCGCACGGCTGGCGTA 2466697 30 100.0 36 .............................. ATCATCTTGCTTCAGCTTCCACAAGTCGAGATGTCT 2466763 30 100.0 36 .............................. GCGAAAGTGTTCGCGTTCGTGTCAGACGATGCGAAA 2466829 30 100.0 35 .............................. AGGCTGTCTTTAACGTGCATGCACGGGTCACCACC 2466894 30 100.0 36 .............................. ACCCGACGAACGAGAAGATACTCTCCTTGTCGTGTC 2466960 30 100.0 36 .............................. CATCTTTATATAGAGTTCGAAGGCCGGAGTTATGGC 2467026 30 100.0 37 .............................. AAGCTAAAAATCGGGTACAGAGATAAGTGGATGGATG 2467093 30 100.0 35 .............................. TTGTCTACGATACTGCCGATGATTGTGTCGTCGGA 2467158 30 100.0 37 .............................. GAGTTATGGCTACCTCCTCGCCAGTGTCGGGGTCGGT 2467225 30 100.0 36 .............................. GCACCTTCTGGGCGAACTTTGAACTTCTTTTCCGGA 2467291 30 100.0 36 .............................. CAAACTTGCCCGCGATTGCGGCTACAGTCGCAGGAA 2467357 30 100.0 38 .............................. AGTCTTTTAATGTCAAATCTGTTCATATCTGTTATTTT 2467425 30 100.0 37 .............................. CGCAATCGGATAACACCCTTTTTAGTTCTACTACTTC 2467492 30 100.0 35 .............................. TTGCTTTATCATAATCCCCCCACCCGGATTCCGGA 2467557 30 100.0 37 .............................. GATTTCATCAAAATTCGCGTCGCTTTGTTTTGTGTCG 2467624 30 100.0 35 .............................. AAATGGAGATACAGTGTTTGAAGAATCTAACCGGT 2467689 30 100.0 39 .............................. TCCGGCCAACAGCGCGGAGCTCTCTCTCGCAAACTTATC 2467758 30 100.0 37 .............................. TCTTAATGTATAAAGAGCGAGAGGCGTATGCCCCTCT 2467825 30 100.0 37 .............................. TTGCAAAATAAGGAGGTGGAGGGAAGAGGAGTTCTTC 2467892 30 100.0 36 .............................. TGCTTTTGTGGCTATTCCGGTCGCGCGGATGGCTTG 2467958 30 100.0 35 .............................. GATTTTGATCCATTATTTTATGCGCCATCTCGACC 2468023 30 100.0 37 .............................. TGCTAAAGCATTGATTTATTATTTTTTTGTATATTGA 2468090 30 100.0 34 .............................. TATAGAGAAAGCCGTTGAAACAGTACGCAAGAGA 2468154 30 100.0 34 .............................. AACAAAAATCTCCTACAACAGTTGAAGTATTTGA 2468218 30 100.0 35 .............................. CACATATTAGTTCCAAATAGTTGTCCTCCTAAATT 2468283 30 100.0 36 .............................. TATAATGGGTTATTTCAGGATCAGTAACATCATATT 2468349 30 100.0 38 .............................. TTTATTACAAACCATATCTCCACGCACTCCCTACCGAA 2468417 30 100.0 35 .............................. AAAAAATGCATCTTCGGTCTTATGCCCTGTTAGCA 2468482 30 100.0 37 .............................. TCGGGACAGTCGTCTGCGTACTCCCCCTCGAGGACGT 2468549 30 100.0 38 .............................. TAATGCTGTACCACGACACGTTCGGCCGTTACGGGGAA 2468617 30 100.0 35 .............................. ACTCGATGCGCTTACGGCGACGGTTTTACGCTGTG 2468682 30 100.0 35 .............................. GAAAGTCTACATAAGCGCCCTCCGGAATTTCGACG 2468747 30 100.0 36 .............................. GCAGATCCGCACTTCGCCGCGCCGAAGACGCGCGAA 2468813 30 100.0 34 .............................. AGCAAAATATAATATATGATAATCAATTTCTTTT 2468877 30 100.0 34 .............................. AACCATTTTGCTACAGATTGATTGTTTGACGTAG 2468941 30 100.0 35 .............................. GCGACCCGTCCAAGCTTTTCCTTATCTAGACAGAA 2469006 30 100.0 36 .............................. GGGGAATGGGAATGGATAGAAAAAGGAGACATACGG 2469072 30 100.0 36 .............................. ATGGCTGACATCATAGGGCGAAAGCAAACGGCGTCC 2469138 30 100.0 35 .............................. TACAAATTCAAATGGCTGAACAATATCCTGATTGA 2469203 30 100.0 37 .............................. TTGTGTGTTACGGTTACACAAGGAATGATGAAATTTT 2469270 30 100.0 35 .............................. GAGATAGCGGTCGTCTCCCGATCCTTTTCGCTGCC 2469335 30 100.0 36 .............................. TACTTTCCCGCTTTAAATCGGTGAAAAAACAGCATC 2469401 30 100.0 37 .............................. GCTGCTCGGCAGGCGATGCCTGCGGCGCTTCTTCTTT 2469468 30 96.7 35 ..........C................... ACGTAGTGCCGATGGGTTCCACTTTCGTTCCTTCC 2469533 30 96.7 34 ..........C................... GGACGATGAAGAAGGCATTTATTTTAATGATCGA 2469597 30 96.7 35 ..........C................... TGAGCCCATTTCCCGTTTCCGTCTGTCACGAGATA 2469662 30 93.3 34 ..........G......A............ TACACTGCCGGCTTCACCCCCGTAAAGGGGGTGT 2469726 30 93.3 34 ..........G......A............ CGTCAATACATCGAGCTCCCTGATGGGCGGTTTA 2469790 30 93.3 36 ..........G......A............ TCGGCAGGCGCAGGCAGGCCGTCATCGAACAGGGTA 2469856 30 90.0 36 T.........G......A............ TGTTTCAAAGAAAAAGGTGGTGAAGCTAAAGTCATC 2469922 30 90.0 35 T.........G......A............ TTTTATTTAAGTATTTAGTTAGACAATAAGTTATT 2469987 30 93.3 36 ..........G......A............ GCCCCTTACAATTCCTTACCCATTCCATTTTTCACT 2470053 30 90.0 0 ..........C...G..............T | ========== ====== ====== ====== ============================== ======================================= ================== 65 30 99.0 36 CTTTTAATCGTACTATCGTAGAATTGAAAC # Left flank : TAAACCGTTTAAAATGTACTGGTAATGTATGTGATTCTGGTCTATGACTGCGGCGAGAAACGGGTTGGGAAAATGCTCAAGCTCTGTCGGAAATATCTGAATTGGATACAAAATTCGGTTTTTGAAGGCGAAATTACAGAAGTTAAATTAAAAGAGTTAACTTTGAAGGCTGAGAAAATAATGAACAGCGATGAAGACTCTCTGATTGTTTTTTCAAGTCGACAAGAAAAATGGTTGGATAAGCAAATCTTTGGTAAAGAGCGGAGTAGTGTCGATAACTTCTTGTAACCGGTTGTCGGTGGACGTATATTCCCGAAAAAAGAATCGGGCTATCGCTGTTATGCGTTCTTTGACATATTGAAAATCAGAATATAAAATCAGTTGTCGAAGTGCGGTTTTTTTCTTACTTTTGCACTTCGACAATTTTACTTGTAGATTTATGCATATATTTAAAAGCTGAATTATTGAAAATCAGTTATATTTTTTGTCGTTTCTAACGG # Right flank : TTGTCGTTTCAACTACTGAATGCAACTTTATGTTTCAAATTTAAGAAAAAGATTTCTTTTGGAGAATAGAAATTGAGTTTGTATTTTGGTCTTTCGTTGATTCTGTATTGTATCTGTTTGGTTATATTGTTACTAAATTCATTGCAATTTGATTTTTTAGGGATGTACTGCCTGATCAGTTTGTTTGTATTCTCAATCAATCCTTTTTCCCATGAAGAATAGGGATGAGTGAAATATATCTGTGTATGTAACTTCTTGGCTAATGATTAATGATCTGCAAACTCGCTACCATTATTTACGGTGATGGAGTGTATATGCTCTTTTTGTATGGCAGCAGTATATCGTAAACGATTTTTGAATGCTCTTTTGCATTTTTCCCTTTGGGCAGTTTTTGCATCATGCAAAAAAACATAGTTCTTTCCACTAAGGTCAGGATATCCCCTTTGCCGTTTTTTCCGACAATAGTGTCCATCTCCCAATTTCCAAAGCGTTGTTTGAGA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCGTACTATCGTAGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.70,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //