Array 1 19132-19337 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBSD01000064.1 Acinetobacter junii strain KCTC 12416, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ================================== ================== 19132 26 100.0 34 .......................... TAACAGAAAATAGAGATCGGCAGTTATTTGATGT 19192 26 100.0 34 .......................... TTGTCTGCGTAACTCCGTAACCTTTGCGCCCTGT 19252 26 100.0 34 .......................... TTAACCGTTTCTTGTGTCTGTTCTTTGTTAAAGT 19312 26 88.5 0 ...................G..T..T | ========== ====== ====== ====== ========================== ================================== ================== 4 26 97.1 34 GTCCTATCGCATAGATAGCTTAGAAA # Left flank : GGGCCAGTATTCAAACAATGGCCAAAATTCAAGGCAACACATTTGAGGGTTTAAAACATATTTATGACAATTTTGGTGATGACGTTAACCTTTATATCATTGACTTTACAAGGGGTAGAGATCAAAATAACAGCAACTCCTACGGAGGTTGGGAATATTTAGATGTTCTAAAGTCACAAGGGAATGAACAACAAATTTTAGAACGATTGGAACAGCATTTAATATTAGGTTATCAGAGAGGTGTAATTAGTCATGAATGTTTTGAACAAGCAGCAGGTGGTAGGATCAAAGCCAATGAACTACAAGTCAAATACAATGATGCAAACGTTCATCAACAACGCTCTAATGACACACGATCAGATGAGCAAGGACGAAACTTATCGCCAGCAAGTAGCAACACGAGCGACAACATCACGTCCAAAGTAACTTCCAAATTTAAGCCCTGATTTTTTTAAGAATGAACGAATAAACGTTCATTTTTTTTTGGCGTTTTATATAGT # Right flank : TCATTTAGTAAATTTTTGAGTTGTAACAATGGCAAACTTATCAACAGAATATTCCTTACCTTTAAAAATAGTTGCTGTCCGCTTAAATCACATGAAATCCCACTTGCCAGGATTACTGAAAAAGATCGAGAAACGAGCCATTGATAATTTAAAGCAACGTAAAACTCAAAATGATAAAGATGATACACAGGTATTATTAACATGGGACGATTGGATCTATGCAGCTCTTGATGCCGACCATGAACGAGAAAACGCCAAAAAAGAAAATTCTTTAATGGAGACTCCAAATAAAGAATCCGTGTATGAAAAGGCTTTAAACAATATAATGGGGCGTACTTCTGCACGGAAACCAGGTTGGGCAAGTAATTTGAGGGTAGGGGAGCACATACCTAAAGAACTCCTAGATCGGCTTCCAGTGACAACTGGAGAGCTTGTGACACTCGGTAATTGGATGCTGACAAAAAATATTTATAGATTTGAAGATATTGTCATTACTGAGA # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTATCGCATAGATAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: F [matched TTCCTATCGCATAGATAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 15130-9091 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBSD01000028.1 Acinetobacter junii strain KCTC 12416, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 15129 28 100.0 32 ............................ TTGTAATCAAAGGGATTACGATAGGAGCGAAA 15069 28 100.0 32 ............................ AACTTGAGCGGACATGACCTTCCTCAAACTTA 15009 28 100.0 32 ............................ AACGGAATTGGGGATCGATTCCATCAGGATCG 14949 28 100.0 32 ............................ TCTTTGAATGTGGTCATTGAACCCCTCCAATT 14889 28 100.0 32 ............................ CCTAAGCACAGTGGGTATTAGCGCATAAGACA 14829 28 100.0 32 ............................ TTTGGGTGCAGCTGACACTGGTGCCTATGGTT 14769 28 100.0 32 ............................ TCTTGTGTGACGACCATTACTGAATACACCAC 14709 28 100.0 32 ............................ AAATTGATTGATATAACTCTCTGCATGGACGG 14649 28 100.0 32 ............................ TCTGAAAAACCGCTTTTAAAAATATTGGCTGC 14589 28 100.0 32 ............................ GACATCACTGCAAGCTACGAACAGCACAAAAA 14529 28 100.0 32 ............................ AATGGATAAAAATGCGCATGTTGAGTCTAAAA 14469 28 100.0 32 ............................ AGTCATAGAATTGGATGACTTTCGGAAAAGAA 14409 28 100.0 32 ............................ TTGATCTTTTTAAATCCGTATTGTGTGGCGAT 14349 28 100.0 32 ............................ TACCGAAGCAAACCATGAGCTTGATACTGATT 14289 28 100.0 32 ............................ TGATAAAAGCACAGGACATGATCACGTTGTTG 14229 28 100.0 32 ............................ GTGGAGAGCTTACACGTTGGCGATATGGTAAA 14169 28 100.0 32 ............................ AACGGTTAGCTCATAAATCTTTTGTTGCGCTG 14109 28 100.0 32 ............................ TTCCGCATATTTCTTTGTGACTTGCACGGTAT 14049 28 100.0 32 ............................ AAACGGTGAATATCGGGTTATGTTGACGGGGT 13989 28 100.0 32 ............................ TTTAAGTCATACTTCTGAACGCAAAAATAAAC 13929 28 100.0 32 ............................ TGTTAGAGCAAGCTCAAATTGATTATTCAGAT 13869 28 100.0 32 ............................ TTTGTAACCTCATAGAATACAGCACGTTTCGC 13809 28 100.0 32 ............................ TTACAGACATCATTCATCGTCTGCCATCTATC 13749 28 100.0 32 ............................ TGACTTAATGCAGTGTTGATCTGCGTTGTTAG 13689 28 100.0 32 ............................ GATGCAAACTAATTTTTCATTTTCAGCAACAA 13629 28 100.0 32 ............................ ATGAGCTTGATACTGATTTTATTGCTAGTTTG 13569 28 100.0 32 ............................ TAGTCTTAATTACATATTCTTCAAAGCATAAT 13509 28 100.0 32 ............................ TTATCCTGAATGTGAAGATGATGACAAGAGAT 13449 28 100.0 32 ............................ AGTTGAGAAGAAGTCATGTCAGTTGAATACAT 13389 28 100.0 32 ............................ GTCAGAGTTAGGCAACGTAACAACTTATCGCG 13329 28 100.0 32 ............................ TTTCGTTGCTGCTGATAAACCAGTTTCTAAAA 13269 28 100.0 32 ............................ CATTCGCCACATGTAAAGAGTTGAACGTTCAA 13209 28 100.0 32 ............................ ATTCATATGCTCGGTATGTTAACTGATGCATT 13149 28 100.0 32 ............................ TTAAGAAAGACAAAGACCTTGAAGTCGCTTTA 13089 28 100.0 32 ............................ TGAGATTAACTTGTTTTGCTTGGTACTTTAAT 13029 28 100.0 32 ............................ TTCAGAGTTAGGAAATGTAACGACTTATCGCG 12969 28 100.0 32 ............................ AGGCAAACGCATTAGCTTCGGCACTTGCAGTT 12909 28 100.0 32 ............................ AACAAAACAGCTACACAGGTGGACGAGGAGAA 12849 28 100.0 32 ............................ ACATGACATAATGAATAAGGAGTTCGGTTCTG 12789 28 100.0 32 ............................ ACTGAATAGCATCAATCACTACAGGTTTTTTA 12729 28 100.0 32 ............................ ATGCAAGCATGATATTTTTCATCTTACTTATG 12669 28 100.0 32 ............................ TTGATGGGAATGCTTATGTCATGCAAAATGGT 12609 28 100.0 32 ............................ TTGGTAGTGTCAATCGTTCCTGTGAGATGTGT 12549 28 100.0 32 ............................ AGTTACTCTATATTTTTTGAATGTAGCTTCAT GGATATGC [12533] 12481 28 100.0 32 ............................ AGTACATGGCTTCGTTAAACCAAGATTCTGTA 12421 28 100.0 32 ............................ GAGAAAACTTGTGAATCTCGCATTAAAGCCAG 12361 28 100.0 32 ............................ TTGCGCTTTTAGTTTTGAAGTAGCCTCAAATA 12301 28 100.0 32 ............................ AACGTGTTTGAGTTTTTACCAGCGTTAAGTTT 12241 28 100.0 32 ............................ ACAGCCCCTTATCGGTTTTGCTGATGACGAAA 12181 28 100.0 32 ............................ GAAATCAACGAACGGTGACTAAACGATTATTT 12121 28 100.0 32 ............................ GTTTCTATTATTGAACCATAATGATTGATTAC 12061 28 100.0 32 ............................ TCAAATTTTGAAAGGACATACTGATGCAGATG 12001 28 100.0 32 ............................ TAAAGTATGAAACAATTGATAATGTATTAATC 11941 28 100.0 32 ............................ TTTGACTGTTTTTGTTTTTGGTTTACATAAAA 11881 28 100.0 33 ............................ ATCATAAGCGTTAACATACGAAATAGGATGCTT 11820 28 100.0 32 ............................ TGAAGTAAAGTATTAAATAAAGCCCAGCATTG 11760 28 100.0 32 ............................ AACAAACATGGGCAGTTGTCATTCAATAGAAT 11700 28 100.0 32 ............................ ATCATTATTGCAGCAAATTATAGGACGTGTGC 11640 28 100.0 32 ............................ ATTCAAACCTGCAAACGAGTTAATGACTGCAT 11580 28 100.0 33 ............................ TAAAGATGGCATGGGTCGTTTGCAATGTTTTAT 11519 28 100.0 32 ............................ GTGTGACGCATAACGAGAATAGATTCATGCTT 11459 28 100.0 32 ............................ AGTCTTTCGACATTTAGCATATGCAATATTGC 11399 28 100.0 32 ............................ ATCAATGTCCATGATGTATGGAACGGTAAACT 11339 28 100.0 32 ............................ TTTGAAGTGTCTAGCGTTTATGAGTTGCAAAG 11279 28 100.0 32 ............................ ACAAGTGACAGAGCTTATTGCAGGCACTGAAT 11219 28 100.0 32 ............................ TCTCACAATTTTCGACAATTGAAATTCTTATC 11159 28 100.0 32 ............................ AACCTGTATGATCGGCACGATTATTCTCATCT 11099 28 100.0 32 ............................ TCACTATTCTTTGTTTCAACATCATTATTTTC 11039 28 100.0 32 ............................ ATAAGCATTTGACTTGTAAGACCTACCAATAC 10979 28 100.0 32 ............................ ATAAGCATTTGACTTGTAAGACCTACCAATAC 10919 28 100.0 32 ............................ TAAAACCCCGCACCATAACTTTAAATGGAATT 10859 28 100.0 32 ............................ TAAAGACACAGTTAAGCCTGAATACAATTTCA 10799 28 100.0 32 ............................ GCTTTCGTGCTTAACCCATTTTTGCGCTAAGT 10739 28 100.0 32 ............................ GAATGATTCTGTATAACATTTTATATCATGTA 10679 28 100.0 32 ............................ ATGCGAAAAATGCAGAAGAAAAACCGACCTGA 10619 28 100.0 32 ............................ GCCCAATCATCGAAAATCAAGCCACAAAAACG 10559 28 100.0 32 ............................ ATTATCGAATCCTGTAGCTTGAGCCAATAAAA 10499 28 100.0 32 ............................ AAGCAAACGGCAAGCTTTTGACTTTAGACATC 10439 28 100.0 32 ............................ TGTGAACCTAAGAACATAAACGGAATAATATC 10379 28 100.0 32 ............................ AACTAGCGGCACTACAGAGACATATAGCGGTA 10319 28 100.0 32 ............................ GTCTGAGCGTCAATATTATGACGAAACAACTA 10259 28 100.0 32 ............................ AAGTCAAGATGATGTTCTTGATATGCTTTCGG 10199 28 100.0 32 ............................ AAAACGTTCCAGTTGGGCAGTTTCCTAATCCT 10139 28 100.0 32 ............................ ACTTGATGATAACGATGCCAAATTAGCAGCAG 10079 28 100.0 32 ............................ TGACGCAACTGGAGTGGTTTTAAAGCGACTTA 10019 28 100.0 32 ............................ AATATCAGGGTTATTAGCTAATTCAGCATCAA 9959 28 100.0 32 ............................ TTTGCCTTCGCCATCAGTTCTGATATTGACTC 9899 28 100.0 32 ............................ ATACCGAACTGGAGAGGGCTGGATTGCTGAAA 9839 28 100.0 33 ............................ TGATAGTTTGATCACATCATAACGATTTAGCTT 9778 28 100.0 32 ............................ TATGGATCGTTCAATGACTGTTATTTCTGAAA 9718 28 100.0 32 ............................ ATGATATTTGTGAGCTTGATATTGATATGTTT 9658 28 100.0 32 ............................ ACAAAAGCACAGCAAGACTACATTAACACATT 9598 28 100.0 32 ............................ TGATCTTCATAGCTTGCAATATTCAAACGTTT 9538 28 100.0 32 ............................ TAATATTTGTGATGCTTGTAAACGATCAGAAT 9478 28 100.0 32 ............................ AAGAAGGGAAATATCACTTAACTAGGGTAGAT 9418 28 100.0 32 ............................ TAATAAAAAGATTGCAATTGGAATTGCAAAGA 9358 28 100.0 32 ............................ TCGTGGTGGTCGCCTGTTTGGGCATGGTGGCT 9298 28 100.0 32 ............................ TGTTGGTTATCTCTGCAAGTACACATCGAAAG 9238 28 100.0 32 ............................ TTTGCGAGTTGGTGTTGAAAGTTGTTTAAGCT 9178 28 100.0 32 ............................ AAGTTATTGCACTAGACATGATCTGCAACAAG 9118 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================= ================== 101 28 100.0 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : TTAGATATTCGAAAATGGCTGGAACGTTTAGAAGATTATGTGCATATCACTTCTATTCGTGAAGTACCTAGCGATATTAAAGGCTATGCCATTTACAAGCGTAAGCAAGTGAAAACCAATGCCCAGCGTTTGGCACGGCATCGTATTAAACGTGGCGATATTGGTTTTGATGAAGCATTAGCAAGATATAGCAATGTAGTTACCACAACGAACTTTCCATATATCGAAATGAAAAGTTTGAGCACTTCAGATCAGCAAAGTGAAAAACGTTTTAAATTGTTTATCGAAAAGCAACCTGCTGAAAAAACCGAAACTCAGGTTTTTAGTACTTATGGATTAAGTTCAGTATCATCCGTACCCGAATTTTAACCCAATATTTTTTCACTCTTTAACAGCTTAATAAAATCAATAAGTTATAATAGTAAGTTAATACTTGGGTCTTTTATAGGATTTTAAGCATAACTTGCTGTTATAGCTTTATTTTTGATGTTAAAATTATA # Right flank : TATTATTTTCAGTTATACTTATCCAAGCGAGATATTCTGTAAGTAATTCTTGTAATAAAAGCCAATTATTTCAGTGAGATAATTGGCTTAAGTGAGAGTTACGATTATCCGCTTATTCGTCGGTCATCCCAATAACACGGTACTACAATCAAGTGGTTCTCATGCAACCGTGACCATAATCGGACACCTAAATCCCGCTGCATATTTTGGACTGTGAAATTGGAAATCAGTAAGGTAGATTTCATATTGTCATAACGACTATATAAGACCTTATGTACCATCTCTAAGCGTTTTTCATGCCGGTCATGCAGGCCATATTCATCAATCACCAATAAATCAAAACTGGAGAAATGGTCGATGACTTCTTTCTCAGAGCGTGAAGTGTCTGACCAGGTATCCATCATTTTTTGAGCAATTTCTGCACTTGTATAATAGCGTGCAGATTTTCTACTGTTATGCAGAATGTTGCGAATGATTGATGCACTCAGATGGGTTTTACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //