Array 1 35121-34893 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDE010000001.1 Clostridioides sp. ZZV14-6045 ZZV14-6045_218, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 35120 29 100.0 37 ............................. TTTGTACCTAGGTGTTAGTATAGCTTTTTGACACCAT 35054 29 100.0 37 ............................. AATTGTGATGGAGAACAACTTCAGAGTGTTATAAAAA 34988 29 100.0 38 ............................. AGGATATAATTTTTTATCATCAATAAATTCCTTTTATC 34921 29 79.3 0 G...................A.AAC.G.. | ========== ====== ====== ====== ============================= ====================================== ================== 4 29 94.8 38 CTTTTATATTAACTAAGTGGTATGTAAAG # Left flank : TAAATAAACAAGATAATATTATCGAAATTTTTACTAACGAAAACTCTTATTGTATATATCTAAAAGCTTTAAGCATTGAAAGTGAAGAATATCTAATAAGTAGACTAAAATCATTTTTTTGATTGTATATATTTTATAAGTAGAAAACAGAGTAGTTAAAACTACTCTGTTTTTGCAATTAAAATTTAAAAATGCATTATAGCTAAAGTGTATATATACGTTATAAAATAACTTATAAATAAAATTATTGATAATGTTTTAAAAAGTTGTTTTCTATATCTAATTTAATTATCAAACTGAGATTCTTATTAGATAAATTATGTTATAATAAATGTATAAATATGCAGTGTTCGATATTTTGAAAATAAAAACTGTAATGCTTGTAAACACTGCGTTACAAGGTGTTTTTGGAAAATATCAAAAAGCACTACTTGTGGCTCACTGCAAATTTATATATTTTCTATATCTTAAAGTATTGAAAATGCTCAATTTATTTTGGC # Right flank : TGGTTTTAAACTACTCTGTTTTTATATAAAGTAAAAATAGAAATATAAATTAAGAAAGAAGTGTACATATAATTTATAAAATAAATTAAATAATAACTTTTATAAAATGTATATATAAATTTAAATAATTTTGGTTCTCTATACTCAGTTTATTTAATAAACGAAAATTTTTATTAGATAAATTATGTTATAATAAATATATAAATATGCAGTGTGCAATATTTTAAAAATAAACACTGTAATGCTTGTAAATACTGAGTTACAAGGCGCTTTTGGAAAATATCAAAAAACACTACCTTGCGCTCACTGCAAATTTTAATATTTTCTATATCTTAAAGTATTGAAAATGCCCAATTTATTTCGGAGTTTTATATTAACTAAGTGGTATGTAAATAGTTCATCACGTAATATTTTCAAAGTGGTTTTTTCTGTTTTATATTAACTAAGTGGCAAGCAGAGTAATTTTTAATTGCTCTGTTTTTTATTTACAAATTTAAGAT # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTATATTAACTAAGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 23023-22466 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDE010000013.1 Clostridioides sp. ZZV14-6045 ZZV14-6045_230, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 23022 30 100.0 35 .............................. TGTAGTAAATTTACAATGAGCCTTAATGACTTGTA 22957 30 100.0 36 .............................. TTTGTATATTACTTGTTAATGCCTGCTTGTATGTAG 22891 30 100.0 36 .............................. TATAAAAACACAGGAGCTATTATAAATCCAATCTGA 22825 30 100.0 36 .............................. CAATTTCTTGAAAAAGATACAACTTTACATCATTTC 22759 30 100.0 35 .............................. ACATCTATACCAACGCCAACACCTCTAACTATATT 22694 30 100.0 36 .............................. CATATAAACTTACAAAAGAGGGCAGAAAACTTGTAG 22628 30 96.7 37 .................C............ AGTGAAACAGCAACGCAAAAATATACACCAGCTACAT 22561 30 100.0 36 .............................. TAAATATCTATGGCCATATCTTTGGCATTGTAATTT 22495 30 93.3 0 .................C...........T | ========== ====== ====== ====== ============================== ===================================== ================== 9 30 98.9 36 ATTAAACCTTAACACTATGTGTATTTAAAC # Left flank : CTCTATACACATGTCTTTTGTTGGATTATTTATATATTCTAAAGCTCGGCCATCTTCTTTTACTGCAACTAAACAAATTTCTTCGATTTGCTCCTGAGTTAAATTAAGTTTATCCCACTTTAAAGATTGAATAAATAATCCATTCTTTTTAACTATTTCTACACATGCTTCATAATTTAACCTTTTGGTATTCATCAAGAAACTTAGTTTCTTTTTTATATCTTTGAAATTTTTCTTAAACATTCCCATATCTCCTTATTAAATTTTTATATTCAAATGGCTCTAAAAAATCAAAAAAGATAAACATCTCTATTGACTATATAAAATATTGCAAGTTAATTTATATAGTGATATAATTAATTTATCCCAATCTAATTTGTATATATGTTGAAATATCTACATTCTTATTTTTAACTGTTAGTTGGGATAAAAATATTAAATTAATTGAAATTGCTGTATTACAAGTATTTATTGATTTTAGAAATGGCTTGTTTACAGCT # Right flank : AATAGTACATCATTACTTTTTCCTCTTTTGAATATTATTTTTACAAAACCTGTTTTTAGATAATTTAAAATAATTACAATAAATTTAAAATAATTTTATTTTATTTATAATAATCTCACTAAATTTACTAAAATTATATTATTTTATATTTTATTTTATTATTTTTTTAATTTTTTATTAGTAAAAAAATAATATCTTATAAAATTCATTTAAATTTATCTATCCAACCTTATGTTTATTTTTACAACACTTTTATTTTATAATTATTATAGTATTTTCATTTTTAATTGTTAGCTGGGATAAAATACTTAGATTAATTTGAAATACTATATCTCAAACATTTCTTGATTTTAGAAAGATCCTGTTTACAGTTATTAAACCTTAACACTTTACTTTGTGTATTTAAATTGGTATAATAAAAAAAGAAGAACTACAATCTATTTTAGTCGTAGAGTGGAGTTCATTAAAACTCAATCATTTCTTGGATTTATGGAATTTGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAACCTTAACACTATGTGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.60,-1.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 28126-27974 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDE010000013.1 Clostridioides sp. ZZV14-6045 ZZV14-6045_230, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ============================================= ================== 28125 23 100.0 45 ....................... TTTAAACTCCAACTGTATAAAATTCATTTTCTAAATCAAACTCAG 28057 23 100.0 38 ....................... TTTAAACTTTTTTTATATTCAGTTTTAAATATGATATA 27996 23 95.7 0 ...........G........... | ========== ====== ====== ====== ======================= ============================================= ================== 3 23 98.6 42 ATTAAACCTTAACACTATGTGTA # Left flank : ACTTCGCATATTTAAGTGCTTTGCCATTTTGCTTAACTGCAATAAGACATAAGTTATATATCTGTTCCTTAGTTAAATTGAGCTCACTCCATCTTACATGTTCCAGTAAACATCCATATTGTCTTACTGCATCTATACACATTTCATAAGTTTGCGTTTTTTCAAATTTCAAATCCCATACATCTTTTTTTGTCCAGTCTAATTCTATTTTTCTCATTTACCCATCCATCCTTATATTTATTTTTATAATACTTTTATTCATATTTAATATATTATTTTTTAACTATATTTATAATAATTATATCATTTTTATTGTTTATATTAAATATTGTAAATTAATTTGTATAGTGATATAATTAGTTTACCTCAAGTTAATTGGTTCAACATTTGGAATATCTGTATTCTTATTTTTAACTGGTAGTTGGGATAAAAAACTTAGATTAATTGAAGCTACTGTATTGTAAGCATTCCTAAAATAAATAAATGGCTTGTTTACAGCT # Right flank : ATAAAGAAGAGCTATCTAAATTAATAGATAGCTCCTCTTTTACTATTCAAACTCTTTTAAGAAATCAACATAAGTTTGCCTATGAACATTAACACCTTTCTCTGGGTCAAAGCCTCCATTTTCATTATAGATTCTATTTATAAACTTTTCTTTAGTGATGTTTTCTTGGCAACCTATAGTAAATAGCCATTCTCCATCCTCTTTTATGGCTAATACTTCTCTGGCTTTTCCTTGCTTTTCTAAATATTTAACACCAAACTCTTCTAAATACTTTTCTTTGGCATTCACATACTTAATTGCATATACATTCTGTTTTAATGCTTCTCTACATATTTCATCTGTCTGATTCTTTGAGAATTTGCCTTCTAATTCGCTCCACTTTACATACTCAAGCGCTAAGCCATCCTCTTTTACTGCTTCAAGACAAATCTTTTTGGTTTGTTTCTTTACATACATTAAAGCTAAACCATTTTCTTTTACTGCACATAAACAAAGTCCAG # Questionable array : NO Score: 5.29 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAACCTTAACACTATGTGTA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 3 29636-29281 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDE010000013.1 Clostridioides sp. ZZV14-6045 ZZV14-6045_230, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 29635 30 100.0 37 .............................. TGTTTCGGGCTTTGGGCGGAGTATGGTTTTATGTTAA 29568 30 100.0 38 .............................. CATTATAACTTTGCTATCTTGTATCTTTGACAACTATT 29500 30 100.0 36 .............................. CCCACAGACTGGTGATGTAGTAAAAATACAGTCCAT 29434 30 100.0 36 .............................. TTGAAATTGTGAAATTTAGTTTTCTATTAACTTTTA 29368 30 93.3 28 .................C...........A TAATGTACACTTGCATCTAAATTACCAT Deletion [29311] 29310 30 93.3 0 ................T............C | ========== ====== ====== ====== ============================== ====================================== ================== 6 30 97.8 35 ATTAAACCTTAACACTATGTGTATTTAAAT # Left flank : ATTTTCATAAAATGTAAATAAATTATCGTTTAAATTTAATGAATACCCTGAACCATATTTTTCACTTTCTACTTTAGTACCTTTTTGGCCCAATTTATCTGCCAAATCGAAAATTTTAATTTCTTTATCAGCTGTAGTTTTTAAAGTTATTTCTTCTGCATTTATTGTTAAGCATTGACCTAATACACAACCCATAATTAGACCAGCTATAGTTATTTTTTTTATATTTTTATTCAATTTAAAACACCTCATTTTTATCTATTTTAATATCATTGTATGTATTTTTTTATAAATTGTCAATGAAATTCGTTATTTTTATTGACTATATAAAATATTGCAATTAAATTTATATGGTGATATAATTAAATTATCCCAAGTTAATTATTACAGCATTTGAAATATCTACATTCTTATTTTTAGTTGGGATAAAAAACTTAGATTAACTGAAATTGCTGTATTACAAGTATTTCTTAATTTTGAGATGTGGCTTATTTACAGCT # Right flank : ACCACTCTTTGGACCATCTTTAAGTGTAAAAAAAGAGCTGTCTAAATTAATAGATAGCTCTTCTTTTATTATTCAAACTCTTTTAAGAAATCAAGATAAACTTGTCTATGGACGTTAATCCTTTTCTCTAAATCAAAACCACCATCTGTATTATAGATTCTATCAATAAAAGTTTCTTTATCAATATCTCTTTGGCAACCTACTGTAAATAGCCACCTTCCATCTTCCCTTATTGCTATTACTTCTCTTGCTTTACCTTGAGCTTCTAAATATTTAATATTAAACATATCTTCATATTCTTCTTTGTTTTTTATATCTTTAATTAAATGTTTATCTTGTTTTAACGCTTCTATACATATTTCTGGAGTTTGTTCTTTTACAAATCTAATAGCACATACATTCTGTTTGACTGCTTCTAAACATATTTTTGGGGTTTGTTTGTTCATATATTGTAGACTAATTCCATTTTGTCTTACTGCTTCTAAACATATTTTATCGAG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAACCTTAACACTATGTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.60,-1.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 4 32780-32926 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDE010000013.1 Clostridioides sp. ZZV14-6045 ZZV14-6045_230, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ========================================= ================== 32780 24 100.0 41 ........................ GTATATTAGCTGGTGTTATATCAGCTTTCATGTAGTTTAAA 32845 24 95.8 34 ....T................... CTTCAATAAAACATTAGACAGATTTATTTTTAAA 32903 24 95.8 0 .......................T | ========== ====== ====== ====== ======================== ========================================= ================== 3 24 97.2 38 TACACATAGTGTTAAGGTTTAATA # Left flank : TATAAAAAAACATGAATTTAGTAAAGTTACACAAGTCGGAAATGGAAAAAATGAAAATGTTTTTAGAGAAATTTTAAGTATATTAAAGGGAGAAGAGACTCCTGGAATTATTACAAATGCAGAGTTTAGAAATAAGCTACCAGAACTTGGTTGGACGTTTGAAGGAGGAACAACTTATAAGTATAAGCAGAAGTCCAGCAAAGGAGACTGGGATGTAGAAATGGGAATTGTAAATGCAGAAGATAAGGCAGTTTATTTTGGTTTATTTGCCAACTCTGAGGATTTCGATTCCTCTGTAAAGCAGTGCTTTAAGTTACTTTTGCCAACAAAAGGAGAAGAACTTTTTAATATTGTAAAGGATAAATTCGAAGATCAAACTTTACAGTTGGACGGGAAAAAAGTGGAAATTTGGAATAGAGAAAGTGGCATTAGTGTGTATATATATAATAAATAATATAAATAAAAAGAAGTTATCTAAGTTATAGGTAACTTCTTTTTTT # Right flank : TTAATAACTGTAAATAAGCCATTCCTAAGATTAATAAATGCTTATAATACAGTAACATTGAATTGGGATAACTTAATTATATCATTATATAAATCAACTTACAATATTTAATATAAACAACAAAAAACACTATAGTTATTATAAATATAATCGAAAAATAATATATTAATTATAAATAAAAGTATTATAAAAATAATGTTGAAAAGGAGATGAATATATGAAGGGAATAGATTTAGATTGTATAAAAAGATATCCATGGGAATTGGAATTTGCAGATAAGCAAACTTATGAAATGTGTGTAGAGGCATTAAGAAGAGATGGAATGTTACTTGAACATGTTAAATTCGATGAACTTAATTTAACTAAAGAACAGCTTTACAATTTATCTCTTATTGCAGTAAAACAAAATGGGTTGGCTCTACAATTTGTAAAAGAGCAAACTCCAGAAATATGTATAAAAGCGGTAAGGGATGATGGAAGAGCACTTCAGTTTGTTAAAG # Questionable array : NO Score: 5.53 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TACACATAGTGTTAAGGTTTAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 5 39576-38403 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDE010000013.1 Clostridioides sp. ZZV14-6045 ZZV14-6045_230, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ====================================================================================================================================================================================================== ================== 39575 25 96.0 25 ............T............ CGTTGTCTTGCTTGCTTCTGTATCA Deletion [39526] 39525 25 100.0 41 ......................... GATTCTTGTACAAAGCAATATATGCCAGTTATTTTTGATTA 39459 25 88.0 38 .......G....C.........G.. CCACTCTACTTGTCAAAAATATAGAATTATTATCATTA 39396 24 84.0 13 ........T.T........A.-... GAGAGCTCTATTA Deletion [39360] 39359 25 92.0 39 ...................A.A... AAGAAGCTTCTATAGAGCCTCTTGAAGCTTACAGTAATT A [39350] 39294 25 92.0 40 .....A......T............ TTATTCTTTACAATCTTTTAAAACTTCACTTAATTCATTG 39229 25 88.0 41 .........G.....C........G CTAACGATTTGTATTTATTTTATTGTTACTTACATCAATTA 39163 25 96.0 40 .............C........... CGCCAATGCAGAAAGTGAACCTCTGTGCAATATAGCATTT 39098 25 96.0 41 ............T............ CTAACGACTTGTATCTATTTTATTGTTACTCACATCAATTA 39032 25 96.0 40 .............C........... CTTGATAGACTGTACTAAAAAAATATAGTAACTTAAATTA 38967 25 100.0 29 ......................... TAATTAAGAACTTTTCTTCTATATTTAGG Deletion [38914] 38913 24 60.0 198 .T.TA.G.T.GC...-A......C. GCTATATATTAAATGATGACTATGTTTATATTCATCTCCTTATATTTTTTAATAATTACACTATTTTTTTATTGTTTATATAAAATATATAAAGTTAATTTATATAATGATATAATTAAATTATCCCAATATAATTGATATAGACTTTGAAATATCTACATTCTTATTTTTAACTATTGGTTGGGATAAAAAACTTAA 38691 25 60.0 39 ...AA.TGA.A.TGC.........G CATTTCTAAAATTAAGAAATAGATTGTTTACAGTTATTA G [38670] 38626 25 96.0 42 ............T............ CCACAATTTTTCCTTGCTCTTAGCAGTTCCAACCCCTGATTA 38559 25 100.0 41 ......................... CTTATATTCGTTCCAGCCTCCAAACTTTTTGCACCCTATTA 38493 25 96.0 41 ...T..................... CTTTGTTAAATCTTTATTGTCTGTTTTATTATATACAATTT 38427 25 92.0 0 ...................A.A... | ========== ====== ====== ====== ========================= ====================================================================================================================================================================================================== ================== 17 25 90.1 47 AACCTTAACACTATGTGTATTTAAA # Left flank : TCTGGACCAATAGTTGGCAAATCCAAAATCGTATAACCTGCTGTTTTTAAAAAATCTACTGCAAAAAATTCCCATTCATTAGGATCCATTCCCCTATAAAAATCATCATAAATATTCAAAATTTCCCCTCCAAAATTCATATTTAAAATTTTATCCCTTTTAAATTACACATTCTATGGTTTACTATCTATAGTAAATATACTACCATAATACTTACATAAATTAAAAATATATTAAATAAAATAATTTTAATTTTTTATATTTTTATAATAATTCTTAATTTTATTTATTATATAAAATATTGCAAGTGTATTTATACAATGGTATAATTAATTTATATCAGGCTAACTTATATATATATTGAAATATCGACATTCTTATTTTTAACTGTTAGTTGGGATAAAATACTTAGATTAATTGGAAGTACTATATTTCAAGCATTTCTTAATTTTAGAAAAGGCTTTTAAAGGATTTATAAGTAGTGCCATATTCATAAATTA # Right flank : AAGAAGCTTCTATAGAGATTATAGAAGCTTCTTTTTTATTTTCTTTTTATTGCACTATATGGTCGTTGGTGTCGTCCCACATACTACCCCTAATTTCAAATTCTAAATTCTTTTCATCACACAACTTCTCTTTAGATTTAGCAGTTCCAACCCCTGTAAGCTCTGGAGTCCACACATCTAAGCTATAGAATCCGTCTTTTGTATTAGTCCCAGTGTAAATTTTAATAGGTTCTTCCACTCCATTTTTAGATTTTTTCTGCATTGTATATCTTAATACTGTCTTATCTGCATTTGTACTTACAACTGTTACATCAAAAACTTTTTGGCTTCCATAAATTCCTGTTGCAGATAAAGTCTTTCCATCTGCTGTTTTTACATATATATCTTTGTAAATATTTGGAGGCATATTTTGGTTAGTTACACTTAAACCTTTACTTGTACTTGTATTTCTTGTATCCCAAGCTTTTGGTTGTCTTGTTAATGCATTAGTATTATACTCT # Questionable array : NO Score: 3.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.50, 5:0, 6:0.25, 7:-1.11, 8:1, 9:0.27, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AACCTTAACACTATGTGTATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [27-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 6 40981-41141 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDE010000013.1 Clostridioides sp. ZZV14-6045 ZZV14-6045_230, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 40981 29 100.0 37 ............................. AGAGTCTAAGACTGCATCACATAGTAATTCGTCTACG 41047 29 96.6 37 .............G............... TTCGTATGCATTACTATAGCTATTTTTACATACAGAG 41113 29 93.1 0 ............A.A.............. | ========== ====== ====== ====== ============================= ===================================== ================== 3 29 96.6 38 TTTAAATACACATAGTGTTAAGGTTTAAT # Left flank : TATAAATAGTTCAATTGTAACTGTTTATAATTACAATAATGAATATCATTATGCTTATGGATGTAAATCATGTATACCTATAAGCATATTCCCATGGGCAGATATAGCACAAGTTTTACATTTAGAGTGTCTAATGGATTGGAATGATGAGGTTGATTTTATTAAGAATGAATATAAAATATCTGAAGATTTCTACAAATATGAATCTATTTTTAATAATAGAATATTACAAAGAATATATCCATCAAATTTAGGAACATGGATTTGATAATAAATCCACAGATGGAAAACAAAAAAATGATATGCCCTATTTTATGAAACAGGAGTTATGAAATTTTTTAAGAGGAATACGAATTGAGATTTTTGATTTAAGATTAATTGTAAATACTCATAAACAAATATATTTTAATTTATTAAAGGTATTTGAATGATATAAAAAGAGTTATCTGGGATAATTAGATAACTCTTTTTGCCAAATAGTAAGTAAGTAGTAATCTTTA # Right flank : TAGTTGTAAACAAGTCATTTATAAAATTAATAAAATCTTAAGTAATACAGTAGTTTCAATTAATTTAAACTTTTTATCCCAACTAACAGTTAAAAATAAAAATACAGATATTTCAAATAATACATCAATTAATTTGGGATAAATTAATTATATCACTATATAAATCAATTTACAATATTTTATATAAACAATAAAAATAGTATGCTTATTATAAGTGTTTTTAAAAAGCGTACATATATAGTGTTATAAAAATAAAAAGGGAAGACTATTGGATGAAGGGAATAGATTTAAATGGAGCAAAAAAACGTCCATGGGAATTAGCACACATGCAAAAACACAGTTATAAGATGTGTATAGAGACAGTAAAAGAATATGGATTAGTTTTAAATTTTTTATACCTGAATATCTAAAGCTTATGTATATAGCTATAGCCACATTGATATTGACTATATTTTAATGTAAAAAGAAACTTCTTTTTTATTACACATAGTGTTAAGGTT # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTAAATACACATAGTGTTAAGGTTTAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 7 41949-41615 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDE010000013.1 Clostridioides sp. ZZV14-6045 ZZV14-6045_230, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================================================ ================== 41948 30 100.0 36 .............................. GATGTAAGAGGTCTTTATTGGCTTAAGCATCCCCGA 41882 30 100.0 29 .............................. AAAGATACAATAACAACAGATTTAACAGC 41823 30 96.7 39 ................A............. AAAGAAGCTAATCGCTTCGCATCTACATTTTTATTATGT 41754 30 93.3 80 ................AC............ TAACGATTTGTATTTATTTTATTGTTACTTACATGTATTTAAACTGTATAAACTGTGTAGTATTTGCTTGAAAATCTCCA 41644 30 86.7 0 ................A......A.A...A | ========== ====== ====== ====== ============================== ================================================================================ ================== 5 30 95.3 46 ATTAAACCTTAACACTTTGTGTATTTAAAC # Left flank : ATATCTACATTATTATTTTTATCTTTTAATTGGGAAAAAGAACTTGACTTAGTTGGAATGTAGTGATTTTAAGTATTTATTGATTTTACAAATAGATTCTTTATAGCTATTGAACCTTAATACTGTGTGTATTTAAAAGTATAACAATATATATTAATAATAAGTATTTTCTTTTTGAAAAACTTCAAATCTATAAAGGCCCATTCTAAAACTACATTATTAAATATCAATTAAAAAAACTAATATTTTTATTGTAGAAAGGGAGGTGCCTTTTTATGTGTTATTGTTATTTTATAATAATTATATTTTTATTGTTTATATAAAATAGTATAAGTTGGTTTATATAGTGATATAATTAATATATCTCAATCTAATTGGTATATATATTGAAATATCTATATTATTATTTTTAACTTTTAGTAGGGATAAAAATCTTAAATTAATTGAAATTACTATACTTCAAGTATTTATTAATTTTGAGAGGTGGCTTATTTACAGTC # Right flank : AGAAGTTTCTTTTTACATTAAAATATAGTCAATATCAATGTGGCTATAGCTATATACATAAGCTTTAGATATTCAGGTATAAAAAATTTAAAACTAATCCATATTCTTTTACTGTCTCTATACACATCTTATAACTGTGTTTTTGCATGTGTGCTAATTCCCATGGACGTTTTTTTGCTCCATTTAAATCTATTCCCTTCATCCAATAGTCTTCCCTTTTTATTTTTATAACACTATATATGTACGCTTTTTAAAAACACTTATAATAAGCATACTATTTTTATTGTTTATATAAAATATTGTAAATTGATTTATATAGTGATATAATTAATTTATCCCAAATTAATTGATGTATTATTTGAAATATCTGTATTTTTATTTTTAACTGTTAGTTGGGATAAAAAGTTTAAATTAATTGAAACTACTGTATTACTTAAGATTTTATTAATTTTATAAATGACTTGTTTACAACTATTAAACCTTAACATTTTGTGTATTTA # Questionable array : NO Score: 4.67 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:-1.06, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAACCTTAACACTTTGTGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.60,-1.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 8958-3726 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDE010000071.1 Clostridioides sp. ZZV14-6045 ZZV14-6045_288, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 8957 30 100.0 36 .............................. GAAGATAAAGAAACATAAGTTATCTTAGTAAAATCA 8891 30 100.0 34 .............................. GCAAAAACGGCAGGAGCATCTGCAAAACAACTTG 8827 30 100.0 36 .............................. GAAGATAAAGAAACATAAGTTATCTTAGTAAAATCA 8761 30 100.0 36 .............................. GCAAAAACGGCAGGAGCATCTGCAAAACAACTTGTA 8695 30 100.0 36 .............................. GAAGTATTCTGCTCAGAAGTTCTTTTTAACTCTAAT 8629 30 100.0 36 .............................. TTAATAGAAGAAAGTAAATTCATTATATCATCATCT 8563 30 100.0 37 .............................. ACAACGTTAAAACTATCTTTAATAGAATTATCAACTG 8496 30 100.0 37 .............................. AGCAAAGAAAGATTAGTATAATAACTTGAACATTTAA 8429 30 100.0 35 .............................. ATAGAATAAATTAATCCCTCCAAGGCATCCTCTAA 8364 30 100.0 36 .............................. ATTGATACTCCTAACACGTTCGCAATTGAAACTAGA 8298 30 100.0 35 .............................. ATATATTAATTGATGATAGAAAGGATGAGATATAA 8233 30 100.0 35 .............................. TCTATTGGTTTTAATACATTTGTACACCCAAACCT 8168 30 100.0 36 .............................. CAAGTTTTAGTGGAGGAAAAGATTCTGCTGCAATGC 8102 30 100.0 36 .............................. GAAGCAATAGTTCCAAATAGGGTAAAATTGATTCCT 8036 30 100.0 36 .............................. AATGTTTGATACAGTTGATAAAAATATGAGTGAAGT 7970 30 100.0 37 .............................. ACTTTATGATACTGCTATGATATTTGAATAAATAAAA 7903 30 100.0 36 .............................. TTTAATTAATTCTGTTAAAGATAATATTGTTTTCGA 7837 30 100.0 36 .............................. AGGTTCTACTATTGATTTGAAGAATTATTCTCCTCC 7771 30 100.0 37 .............................. TTATGTACATGTATAAAGATATAGTCTTTATTATCTC 7704 30 100.0 36 .............................. TGAGTCTAGTATTCATTTTAAACAAGTTATTGATAT 7638 30 100.0 36 .............................. TGATTTTTCTTCTAATGCTCCCGAAAATCAAACTCT 7572 30 100.0 36 .............................. ATGCTTTGACTTCTTTGGGGGTGGTAATTTGGCTAA 7506 30 100.0 36 .............................. AAGTTTAACCCTCGATTCCGTTCAACTTGATTCTCT 7440 30 100.0 36 .............................. AAAGTGCTGGTTATGTTGCTTCTTTAAATAGAGATA 7374 30 100.0 35 .............................. AAAACTAAAGTTAGGGGCGTTTCTTGGGATAAAGA 7309 30 100.0 37 .............................. ACTCTTATTTCTCTAGTTTTGAATTTGTTTCTTAATT 7242 30 100.0 36 .............................. TTTTAAATAATAACTTACTTTAGATCAGAATGACTT 7176 30 100.0 36 .............................. TTCTGCTTGATATGGAGTATATGCTGTATAAAATTC 7110 30 100.0 36 .............................. GTTGTTAAATTTTTTAAAGTGGTTTATCATTAACTT 7044 30 100.0 34 .............................. AGGTTATAAAACTATTTTAGATATTACTTTTTAT 6980 30 100.0 38 .............................. ACGCCAGTTCCATATCTCCCTCAGTATTAAATGAATAA 6912 30 100.0 37 .............................. CTAAAGATGATATATATGATGTCGTTAGACTTGTTTA 6845 30 100.0 36 .............................. TAAATATAAAAAGTTTGTAAAGGAGGTGCTTTTTTG 6779 30 100.0 36 .............................. CTATAGTTATCTTGTTTTTTTAAAATTTCTATTTCT 6713 30 100.0 35 .............................. TATATTATCAAATATAAAAAAGGAGGGGATAAAGT 6648 30 100.0 37 .............................. AATAAATTTCTAATCTGTTTATCTACTAACTTATCAA 6581 30 100.0 35 .............................. AAAACATAATCACTTTCTTGATATTCTAAATTATG 6516 30 100.0 36 .............................. TTCAATTTTAAAAGTGCATCTAACTTGTTTTCTAAG 6450 30 100.0 36 .............................. TTCAAAGAATTTAAAATAAGATTGTCCAAAAATTCA 6384 30 100.0 36 .............................. CCAGAACAATTTGGAACAGTCAAAACAACATGATAA 6318 30 100.0 35 .............................. TTAAATTACTATAGTCTTTTAAGTTATATTTTAAA 6253 30 100.0 35 .............................. AAGCCTACCAAAACAGTAGCTTTTATATTATCCTC 6188 30 100.0 36 .............................. TTATTTCCTTGTTTTTATTATATCATATCTTAGATG 6122 30 100.0 37 .............................. ACTGGAGTAAACACAATTTTTCTAAAAGTCCAAAAGT 6055 30 100.0 35 .............................. ATTATTAGGTCATAGTTTTTACTATTTATAAGAGG 5990 30 100.0 36 .............................. GAAAGAGTTGAACGAGGATTATATATAATTTGACAT 5924 30 100.0 36 .............................. ATTATAAATTTTGATGTAAGGCAAGAACCAAGTAAG 5858 30 100.0 36 .............................. CCATCCTTAAATTGTTTATAAACTTGATTTGCTCCT 5792 30 100.0 35 .............................. CAGTTAAATTCTAAGTATAAATTTGCATATAGTTT 5727 30 100.0 36 .............................. TCTGATGGAATAAATTCTTTTATATTGTCTATAGGA 5661 30 100.0 36 .............................. TGTTAAAGTTTACTAGATTTGAAGGAATCGAAGCAG 5595 30 100.0 35 .............................. GAAACAACTTGGAAATGGTTCATTATATAAGAAAG 5530 30 100.0 36 .............................. AATTTTAGAATTAGAAGATTATATTGCAGAAGGTAT 5464 30 100.0 36 .............................. CAATCTTTTAAACTTTTTATATTAACACCACCAAAA 5398 30 100.0 36 .............................. CATTTCTATCAACTACATTCTAAATTGCTGTAATTA 5332 30 100.0 37 .............................. TCATTCGTAAGTAAATATATTTGATTACCACAATTCC 5265 30 100.0 36 .............................. TTTCAAATTACCACCTTTCTTATTCATTATATTGCA 5199 30 100.0 36 .............................. GATAACTCCACCAATGTATTATTCAAACTTGCTTCT 5133 30 100.0 36 .............................. GAACTTTAAGGAAATATTATCCTGATTTGTGGGGGG 5067 30 100.0 37 .............................. CTGGTTGCGGTATTGTTCATGTTCTTATATTAAAGAA 5000 30 100.0 36 .............................. TACAATGGTTCAGACGCAGAAGTGAGTCCCATTGCT 4934 30 100.0 35 .............................. CACATTAAAAATAGTTGCTACAGATGCAGAAAATG 4869 30 96.7 35 ........T..................... AGCTGATGAAGCTATAAATACTATTTCTCGAACTA 4804 30 100.0 35 .............................. ACAGAGTAAAAATAAAAACAGATGATGATGGTTTA 4739 30 100.0 36 .............................. CGGTTTACCACCTACTTATTAACATTTTCCATACAT 4673 30 100.0 36 .............................. TTTTATTGTATGGGTAAATATCTGCCCAGCTATTAA 4607 30 100.0 34 .............................. TTTTATAGATGTAGTTTCAATGATTTTGCCTAAC 4543 30 100.0 36 .............................. AATGGAAAACCTGGTTCTAGTATAACTGGTCATGCA 4477 30 100.0 35 .............................. AGTGTTGAAAATGAAGTTATTAAAAGAGAGGAAGA 4412 30 100.0 35 .............................. ACACCTTATAAAACTATTTAGCAAGTCCTTTAAAA 4347 30 100.0 35 .............................. CAATAATAACAAGAGTTTGAGATTCTTTACATAAA 4282 30 100.0 36 .............................. AGTAAAAGAGGATATAATTCAGCAGAAGAAGCTGTT 4216 30 100.0 38 .............................. ATTGACAAGATAATAGAGCCAGATTTTGTTCCTGGATA 4148 30 100.0 36 .............................. CCATTTCTACCTGGCACACTCTTTTTTTCTATAGAC 4082 30 100.0 35 .............................. AAATATTAATTCCAGTCCAAACCCATTGATTTTTA 4017 30 100.0 35 .............................. CTAAAACAGGTAGAGAAGAAAAACGAAATTATTGT 3952 30 100.0 36 .............................. CAATAAACATTTCTCCAAGTATTATAACTTTGTCCT 3886 30 96.7 36 ......T....................... AAAAAGGACTATCTGGCAAAACAGACAAAACTAAAT 3820 30 100.0 35 .............................. TTAATTATAAAACCTCTTGTATATCTTTTGCCTAG 3755 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 80 30 99.9 36 GTTAAACAGTAACATGAGATGTATTTAAAT # Left flank : | # Right flank : TATTATACAATATTAAATTAAATAAAAATAATTTTATAGTAAATTATATTGTAAAATTATAAATTTTAATATTCTGAATAAGACAATATATGATATACTTATATATAAATAATCAAATAAATAGGTGATATTATGAAGCTTACAGGAACTTTAATAAATTACTATTTCCATTGTAAAAGACAATGTTGGCTACTTGGCAATAGAATAAACCTAGAAGAAAATAGTGAAGATGTAAAAATAGGTAGGATTCTCCATGAACTGAAAGAAAAAAATTCAAAACATAAAGAAATTGCAATTGAAAATATAAAGATAGATAAATTAACAAAAGAATATTTAGTAGAGATTAAAAAGTCTGATGCTGATGTAGAAGCTGTCAAATGGCAAGTTCTTTTATATTTAAAAATATTAAAAGAAAAAGGAATTGTTAGAAAAGGAAAAATTGAATTTATAGAAAAAAATAAAACCGACAAAAAAATAGTTTTTGTAGATTTGAGTGAAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAACAGTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [95.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 193-32 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDE010000073.1 Clostridioides sp. ZZV14-6045 ZZV14-6045_290, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 192 30 100.0 35 .............................. TTAATAAAAGTATAATTGACGGTTTTAATATATAT 127 30 100.0 36 .............................. GAAGATAAAGAAACATAAGTTATCTTAGTAAAATCA 61 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 3 30 100.0 36 GTTAAACAGTAACATGAGATGTATTTAAAT # Left flank : ACACTCAAGTAGAAGATGAATCTGGAAATATAGTTGTAGGAAGTGATGTTTGGGAAGATTATGTTTCTCTATTGAAAAATAATGATATTGAGTATTCTGAAAAAAGAGTAAAGATGTCTGACATTATGGAAAAATTAGATTATTTTACGTATAAACTTCGTAAATTTGATAATTCATTTAATGATTATATAGGAGATATTTTTTATATTGATGATGGTGAACAGTATTTTACAGATGGTAAATTTGATAGAAGCAAATTTAATGAAAATGTAGAACATGAGTATATATAGTAGGTTTAGATTATAAATAGGATATATAGTATAGTGTAATTAAAATTTATCCCAAGTTAATTAATGAAGAGTAGTTTATAAGTATTGAAATTTAAATATTTTACAACTTTTATAGATTTTTTATGATTAGCTGGGATAAAAAATCTATATATCAGTCTTTTCAATGTGTTTAAAAGCAATATACTTTTAAGAGATATTGCTTTTACAGTG # Right flank : TGCAAAAACGGCAGGAGCATCTGCAAAACAAC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAACAGTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [26.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //