Array 1 37123-40274 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSSN010000003.1 Acinetobacter baumannii strain A87 P_contig000003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 37123 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 37183 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 37243 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 37303 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 37363 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 37423 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 37483 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 37543 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 37603 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 37663 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 37723 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 37783 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 37843 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 37903 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 37963 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 38023 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 38083 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 38143 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 38203 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 38263 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 38323 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 38383 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 38443 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 38503 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 38563 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 38623 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 38683 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 38743 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 38803 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 38863 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 38923 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 38983 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 39043 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 39103 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 39163 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 39223 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 39284 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 39344 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 39404 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 39464 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 39524 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 39584 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 39644 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 39704 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 39765 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 39825 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 39885 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 39945 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 40005 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 40065 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 40125 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 40185 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 40245 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //