Array 1 71762-73437 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACYWD010000008.1 Klebsiella variicola strain CFSAN059611 contig00008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 71762 29 100.0 32 ............................. CGTCGGCCGCTGCTGCGGATTCCGGTACTTAC 71823 29 100.0 32 ............................. GGCATTGTGATCTGCTGCCGCCATGTCATAGC 71884 29 100.0 32 ............................. CTGGAGTGCTCGATCAAAGAAGTTTCTTTCAC 71945 29 100.0 32 ............................. CGCCGCAACGGTGCTCGCGGACTGCTGCACGG 72006 29 100.0 32 ............................. GGGCAGTGACCGCGGAGCTGTCCGGAACCATC 72067 29 100.0 32 ............................. GGTCGCCCGAACGTTTACGGCCAGTGCCGCGT 72128 29 100.0 32 ............................. GAGTTGCTCAGCTGGGTAATCGAGCTGCCCTG 72189 29 100.0 32 ............................. GGTTCATCAATCGCTCTCGTTCTGCCCGTTGA 72250 29 100.0 32 ............................. GCGATAGCGAATACTCAACATCGCAATATGAC 72311 29 100.0 32 ............................. CGCTGCCAGTGCAGCGGGACGGGGAAGACACT 72372 29 100.0 32 ............................. ATCGCCGGGGCGCTCAATACCGCCGCACTGGG 72433 29 100.0 32 ............................. GCGGCACCTGGTCGATAAAAGGTGATGGCGAA 72494 29 100.0 32 ............................. AGCTCCGCATCCGCAGCAGAAACAAATCCAGT 72555 29 100.0 32 ............................. AAATATAATGGGAATTGCCCCGCTCCGGCGGG 72616 29 100.0 32 ............................. CGGGATCGCTGCCACCAAACGGCTGATAATGG 72677 29 100.0 32 ............................. CTCGCCCCAGTCCGGTTTGCTCATCAACTACT 72738 29 100.0 32 ............................. GCGGCAACGCCTCACAGATGCACAAATAAATT 72799 29 100.0 32 ............................. ATGATCTGCCACCGAAAGATTTCGCATGCGAA 72860 29 100.0 32 ............................. TATTTGACGTAATCGGAAACGCTAATTTTGAA 72921 29 100.0 32 ............................. AGGCCATACTGTTGTTGATGAGACATACAGGG 72982 29 100.0 32 ............................. TTCGCGCTGGTTTTCTCATCTGCGGCAAACAA 73043 29 100.0 32 ............................. TAAATGGCAATTGTTAATATTAACGTGTCGGT 73104 29 100.0 32 ............................. AGCCAGTCCGCATCTCGCCAAAAACCGTTAAC 73165 29 100.0 32 ............................. ACAATCGCGACGTAATGATTGAGCCAGGCATT 73226 29 96.6 32 ..........................A.. CTGGCCTTTTTGATAGTGCAACTCAGGTTTAA 73287 29 100.0 32 ............................. GGTTGCGACATCGCGCCAGGTATTAATCACGG 73348 29 96.6 32 ............................A TCGACGATGTTCTGCGTGATGGTGATGTATGC 73409 28 82.8 0 ...........TT..-.........G..C | A [73420] ========== ====== ====== ====== ============================= ================================ ================== 28 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGTTCTTGCGGCAGGCGAAATTCAGCCACCCCCACCACCTGAAGACGCACATCCTGTAGCTATCCCACTCCCTGTCTCTTTAGGTGATGCAGGCCATCGGAGTCGTTAACGATGAGTATGTTGGTTGTGGTGACAGAGAATGTTCCTCCGCGACTCCGTGGACGGTTAGCCGTCTGGTTGCTGGAGATTCGCGCTGGTGTGTATGTTGGGGACATCTCAACAAAGACACGAGAAATGATATGGCAACAGGTTTCCGTTCTAGCAGAAGAGGGGAATGTTGTTATGGCTTGGGCGACGAATACCGAATCCGGATTTGAGTTTCAGACATATGGTGTGAATAGACGTATTCCGGTGGATTTGGATGGACTGCGGTTAGTATCTTTCCTTCCTGTTTTAAAACAATGAGTTATATGCTCTTTAATAATGTAAAATTGTTGCTTAATTGTTGGTGAATTGTTTTTCAGTTAAAAGCTATTGATATTGAAGTCTATTTTTTTAGT # Right flank : CGCAATTAACAATCAGGCGCCATCTCATAGGCTGTTTGATGGCGCAGGATCAGCACCGCTTGCCACCAGCCCTGCGCCTGAGCTTTTTTGTGTCCTTTTGTCGGCAAAGCATTGGTAAACGCTTGGGCGGCGTCTCTATCCTCAGTTAGCGCAAAATAGGCCAGAGCTTTTGCTACTGGCCCGTGCGCATCAGGCGTCGTGCGAGCAGATTGCGTAGCCTGGCGTCGGCGCTTTCGCGCCCGGCATTTTTCGGCATATTAAGCTCAGAAGGAGAAGGTGCCGGGACATATTTATCCACGAAAGCAATGAGCTCATTGACCGTTAGCACCCGTTCGGCAATGTGCGCGACATCCGGCCAGTAATTTTCTTTCGCCTGATACATCAACCACATCGCCTGCAGATAGTCGTCGCGGTTGAGCGCGAGTATCGCCTGCTCGGCGTGAATACGGCAGACCGGCGTCACAAACTCCTCGCTGATAATGTCATCACTAGACTGCTGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //