Array 1 1262965-1261405 **** Predicted by CRISPRDetect 2.4 *** >NZ_RKKA01000001.1 Arachnia propionica strain FDAARGOS_578 unitig_0_quiver_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 1262964 36 97.2 37 ...................................C CCTTCCAACCCGGCGCCGTCCTCGAGGCCGCCCACCT 1262891 36 97.2 37 ...............................G.... ATTGACGCGATTCGGTACGGTCAATCGGGGTAGCGTG 1262818 36 100.0 36 .................................... TGATTTCGCATCGCGTTGAGTGAGGGCCTCCAGCAG 1262746 36 100.0 37 .................................... GTCCGACCATTCAATCCGTATCCACCGCCTAGAAACC 1262673 36 100.0 36 .................................... CATCATCGGGGAACTCGACCTGGTCAAAGTCGACGG 1262601 36 100.0 33 .................................... TACTCGGCTACCCCCGAGCGCCGAAAGGCCCGC 1262532 36 100.0 37 .................................... TTGAGCTGTTGCGGGAATGGACTCGTGGCTGTTACGC 1262459 36 100.0 35 .................................... GCCTACTCCCGCCCCCTGCGGTACCTGCTCAACTA 1262388 36 100.0 35 .................................... AAGGCGGGGGCCGCGAGGGAGCGGTGGTCGAGCCC 1262317 36 100.0 39 .................................... AGGTAATGACAATGTGGAAACAGGCCTGAACTGGATTCT 1262242 36 97.2 37 ..........G......................... CACATCGCCTGTCCAAACTTCCGCCGGAAGGGGCTCC 1262169 36 100.0 39 .................................... GGCGGGCCATCACCGCACTCCAAGAAAGGAACACCGCAT 1262094 36 100.0 36 .................................... CCGACGGGTCGCTGGAAGGTAGGGCGGGTCGAGGTA 1262022 36 97.2 37 ................G................... GGAAGGAAATGGGCACCACCCTGCCCGGGCAGCTCGA 1261949 36 100.0 36 .................................... GGTGTTGTCGGTCGGCAACTGGTACTTGCCGACGAT 1261877 36 100.0 39 .................................... GCAGCACCATGGTTCACCGCCGGGCGGAGGGGCCCACTG 1261802 36 100.0 38 .................................... GTTCCTCGGTGCTGCCATGACTCTCATCATCCTTCCCA 1261728 36 100.0 35 .................................... GTGGAGGCTGAAACGATGAAGGAGGTGGGTCTGAA 1261657 36 100.0 37 .................................... CCACGCCCCATTGTATCTCACCCCAAGGAGTCCCCAT 1261584 36 100.0 36 .................................... GGCGCACGTCAGGATCTCGCCGGGAACCAGTAGCAG 1261512 36 100.0 36 .................................... CTCCGGCCTGTGGTCCCGCTGGGCCAGCGTGGACTT 1261440 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 22 36 99.5 37 GTCGCAATGGAGCCTGACCTTTGAGGTCAGGAAAAG # Left flank : TGCCGGCCATCTTCCTTCCCTCGTCGTCCCGGGGAACGGCAGCGGAAGAGGTCGTGTAGCCCAACGCAGCCTGCAACCAGGGCTGCGATGTGTCGGCCAGCCCAGCCCGATCGCTTTCGGCATGCGATCCGGTGCCGTGGTGGGGCGAGAGACACGGGAGGTGTGGCCCCGCCACCGTCGTCATCGTGCGACGCGGGCTCAGCTGTGTATTTTGCTCCGCCGTGACCCGGCGAGATCACCCTGACCGGCGGGTCTTGGTGCTTCCAGGAGCGTTGCGCAGTGCCCCGTCTGTTCATCGAAGTCAGGATGCGATTCTGACGAACCAAGACCGCTTATCAAACAAACATAGCGGCAATTGAGAACGGTCAAGATCGACAGGATGGATTCATGATGGAACCTTCAAGAATCTGTGTATGGATGACGTGGGGAAGTATGTAGAACCTGATCTTTGAGATCAGGAAAATCGCGACCCATAGTTTCGTGCCGTACCCCGCTTATTT # Right flank : GCTCGCGATTTCTTTGGTCTCTGACTACTAGTGGCGTGGCGTTGAGGTGAGTTTACGTTTGCGGTTGATTTTGGCGAGGATTTCGTCTGGGGTTTTGGTCCAGATGAACGGGTGTTTCCGGTTGTTCCAGCTGTTGATGAATTCGCGGATCTTGCCGATCAACTCGCGGACTGAGACGAAGGTACCGCGTCGGATGGCCTGGCGTTCGATGATGCCGAACCAGACCTCGACCAGGTTCAACCATGACCCCGACGTCGGGGTGAAGTGGACCTTGATGCGTGGGTTTGCTGTAAGCCAGTTGCGGACCTCGACTCGCTTGTGCGCGGCGTAGTTGTCCATCACCAGGTGTAGTTCCTGTTCCGGGTAGGCACGGGCCACATGCTTGAGGAAACCGAGGAACTCTTGGTGGCGGTGCCGGTCCTTGCAGAGCCCGGTCACCTTCCCGGTGGCGATTTCCAGGGCGGCGAACAAGGTGGTGGTGCCATGGCGGACGTAGTCGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAATGGAGCCTGACCTTTGAGGTCAGGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA // Array 2 2396687-2403831 **** Predicted by CRISPRDetect 2.4 *** >NZ_RKKA01000001.1 Arachnia propionica strain FDAARGOS_578 unitig_0_quiver_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 2396687 36 100.0 38 .................................... AGCAGCTTCCGCACCCGATACGGGTGCAGACCCGGCAG 2396761 36 100.0 36 .................................... CTGATTCTCTGGTTCGGGAGTCGCCCCCTCTGTCGT 2396833 36 100.0 37 .................................... GGCCACTTCACCTTGCCGGCATCCGCATCAACGACAG 2396906 36 100.0 37 .................................... ACATCTTTGAGGCCGCTGCGGAGGTGCCCGCTGCCAG 2396979 36 100.0 37 .................................... TTGCAGTCTCTGCATGTCCAAGTCATGGTAACTATCC 2397052 36 100.0 39 .................................... GACATACCCCACATCCAGGCACTGAATGGCCTGATGGAC 2397127 36 100.0 37 .................................... AGCATTCAAAGCGTGACAAGATGCATCTGTTTATCAC 2397200 36 100.0 35 .................................... TGGAGGATATGATTCTCTATACCATTGATGACTCG 2397271 36 100.0 36 .................................... TTGGAGATTCTCACGGAAACCCGGGAGAAAATGCAG 2397343 36 100.0 38 .................................... ATCTTTTCGCGCACGTCTGCAAAACACTTCAGATTCAT 2397417 36 100.0 39 .................................... CCGTAACATTGTCGCTCGTGAACAGCACCGCATTCGCGA 2397492 36 100.0 34 .................................... ATACTGTCGCGCCTGTTGCGTGACGGTTGGGTGT 2397562 36 100.0 38 .................................... CAAACCAGCGCCACTTCTGCCGTATGTGCCACCCCGGA 2397636 36 100.0 38 .................................... TTGAAGACATCAGGAGAGCGAGACACCACCATAGTTAT 2397710 36 100.0 36 .................................... ATCCACAAGAATGGCCTGAGCGTTCGGGATGTTGAG 2397782 36 100.0 37 .................................... TTCATGGCGTTGACCATTGCCACAATGGCCGGCACAG 2397855 36 100.0 37 .................................... AACAAGACTTTCGATCAGCGGGGCAATGTCTTTTTCT 2397928 36 100.0 36 .................................... AGGAACTCGCGCTTCTTGTTTGACTTTTCTTTAACT 2398000 36 100.0 36 .................................... CAGCTGCGGTTTCGAGTTCCCGCCAACGGGCACCGA 2398072 36 100.0 36 .................................... TCCAGCAGGAAGTGGTTGTAGCCATCATTCAGCCAG 2398144 36 100.0 37 .................................... TGCTTCTTGTAGATCCAGGTCGGGTAAGTCTCGCGCT 2398217 36 100.0 36 .................................... ACGAAGATCCAGGTGCCCGACGTCACCGCCCCTACC 2398289 36 100.0 38 .................................... TGCTGGGACGCGTCAATGCCCATCATGGCCTGTTGGAA 2398363 36 100.0 36 .................................... CACGTACTCCCTGAAACAATCCCTGGTCACCCCCTC 2398435 36 100.0 40 .................................... ACAGCCTGGTCGCGGGCCTGGGGCACCCGGACCCGACCTA 2398511 36 100.0 40 .................................... CAGTAGTGTGACTGTTCCTTCGTTTGTCAGGAAGTCTGGG 2398587 36 100.0 39 .................................... GTGAAGCGTTTGAACGCTGCCAGGGAGTCGGAGCCGATC 2398662 36 100.0 37 .................................... ATTCTTCAGAGCATCCATGACGGTGACGAAGTGATCC 2398735 36 100.0 38 .................................... ATGTAGTCTCGCCCTTTCACATACCCACCAGTACCAGT 2398809 36 100.0 38 .................................... CGTGAAGCCCCCGCCGGGGCCCGCGACACACTCGGCGG 2398883 36 100.0 37 .................................... GCTGGTGGCGCCGGCACCGTCCTTCCGCTTCAGCTGG 2398956 36 100.0 40 .................................... AAGACGGCCTTCTAGGGCCAATGAAGTGAGCCCGCCCCAA 2399032 36 100.0 42 .................................... GAGGGACGGATCCGTCCCCATAGGGGTGCTCATCCCAGTACC 2399110 36 100.0 37 .................................... GCGGAAAACGCCCACAAGCTGGGATCAGTGTATTCTT 2399183 36 100.0 36 .................................... ACAACCTGGCCTTTGACGGGGACTTCATACTGTCAC 2399255 36 100.0 36 .................................... ATCTGCATGTCCAGAGTGCCGATCACATTGTCATAG 2399327 36 100.0 39 .................................... GCGGTCACACCGGCAGCGTATGCCTGATCGGTCCGCCCC 2399402 36 100.0 37 .................................... CTGTTTCTCGAGTTAGGCTGTGGCATATCAGCAAGAG 2399475 36 100.0 37 .................................... AGCATAGTTGTCTGCCATTGTTACCTGTCCTTCTAGT 2399548 36 100.0 37 .................................... GATCTTCTTGTAGGCCTCGGTGACCAATTCCGGGTCC 2399621 36 100.0 37 .................................... GAATATGAGACCACACAGGGTTTCTCCCTATCCATTG 2399694 36 100.0 37 .................................... TTTCATGAACACTTTCCTTACGCCAAGCTCGGTGGCC 2399767 36 100.0 39 .................................... TTCTCGGGGCCTGCGGTAGGCCGGCCGAGGAACCGACAG 2399842 36 100.0 40 .................................... ACGCAAGCCGGGTACGGCACGGAGTTGCGGGTTGTGGCCG 2399918 36 100.0 36 .................................... CGGAACCTACCCGGCCAGATATGGCAGGCCCTCTCC 2399990 36 100.0 37 .................................... ACATGTACGGGAATCCAACAGAATTCCTCACCAATCC 2400063 36 100.0 36 .................................... TGCGGGCTGGGGCGCTACAGGGGCATGGGCGCGATA 2400135 36 100.0 36 .................................... CGGGTGCAGGTGTGTACAGGGCTACCCGGACAACGT 2400207 36 100.0 37 .................................... CCCGCGGCTGTTTTGATGAGCCGTAGAACCAACGCTT 2400280 36 100.0 35 .................................... ATCGAGGGCGGTTGCCTCGAGGTCGCGGCACCAGC 2400351 36 100.0 39 .................................... CCGGTCGGCTGGTCGCGGCCCTGGGATGAGTTCGGCGTG 2400426 36 100.0 38 .................................... GACCCGCCCGGCATTGACGCGGCAGGCAACAGCAAGAT 2400500 36 100.0 37 .................................... AAGCATCAAAGCTATGGCCTTGGCCCCAATCAACAGG 2400573 36 100.0 36 .................................... GTGTGGTGGTCCTTCACTTCCCATGACAAATTCAAC 2400645 36 100.0 37 .................................... TTGGTTGCTTTCTGCATTTAATATCTCCTGATCAGAT 2400718 36 100.0 37 .................................... CCCTGCTTGTCCGGGTAGCAGGACAGAGTAACAGGCC 2400791 36 100.0 35 .................................... ACTATTCCGCGACGGACCAGCAGTACATCGAGGGC 2400862 36 100.0 37 .................................... TGCACATCCGCCCCTCTTTCGAGCAGGGGGCCTCCAT 2400935 36 100.0 39 .................................... GGTGCGGTGGATGCCGAGCAGGTTGGCAACGTCGGGGGT 2401010 36 100.0 38 .................................... AAGAGCCTTACGAATCTCTTTCTGCTGTTCCTTGTATT 2401084 36 97.2 37 ........................G........... ACCCAAATCGGGCCGGGCCACTCCGACGGTTCGCCCA 2401157 36 100.0 35 .................................... GTTCCTCGGAGCGAAAAACATCGTGGTGGAAGGTA 2401228 36 100.0 36 .................................... GAACCCAAGCAGCTCGGGCGGGATGCTCACTTCGGC 2401300 36 100.0 39 .................................... ATCGCTGTCGCCCGTGCCCTCGGGCTCGGCCTGGACCGG 2401375 36 97.2 35 ............................G....... AATGTTGCTGAAAAGCTTCAGGGCGATTTTGAGGC 2401446 36 100.0 36 .................................... GCCTCGATGAGGCCGACGTAGATGTCCTCGATCTTG 2401518 36 100.0 38 .................................... ATCGTTGTTTGCCACGATTCACCTTTCCGACAGCGGCC 2401592 36 100.0 37 .................................... TATCGTGCGCAACTCATTTTTGTAACGCCTCAGATAA 2401665 36 100.0 35 .................................... CCGCCGGCATAACTCATGGGAGGTTTCATGTCTCC 2401736 36 100.0 38 .................................... AATGGGATCCCCGGGGTTTGTAGCCCAAAGCCATACCG 2401810 36 100.0 37 .................................... ATGGCTTGGATGGGCCATTTCGCGATTCCCTCGCCGA 2401883 36 100.0 37 .................................... CAGCGACCCGTCGGGACGGTCTCTACCGGATGGAGGC 2401956 36 97.2 37 ...............T.................... TTGATAACGCGAGTCAAAGATCTGCGTACTGCTGGGT 2402029 36 100.0 36 .................................... CTTTGTCTAGCATGACTAGATCCGCAGCAGCCCCGA 2402101 36 100.0 36 .................................... TCGCCAGAAACTGTTGCGTTCTCGAGAAGTCGCCGC 2402173 36 100.0 39 .................................... GCTTGTGGTGCACTGTGGTGGGCACCCGCAACAGCTGGC 2402248 36 97.2 40 .....................A.............. CCGAGCAGCCCGGCACGATCCCCCGAGTCGAAACCTCCCC 2402324 36 100.0 37 .................................... TCGCATCCCCGAGTCGATCAGCCAGGAGGCCGCGTAT 2402397 36 97.2 38 ..........C......................... TCACGTTGTCGGGGAGCCGTACCGTCAGGTACTGGCCG 2402471 36 97.2 37 ..........C......................... GGGGATCTTGCCTTCGATCTTCGGCACGATCTTGATC 2402544 36 100.0 37 .................................... AAGCCCGGTGAGACAAGTCATATCCTGGTCAGACTCA 2402617 36 100.0 39 .................................... TTGTCGTCTCGGAGCCCGAGCCATTGGGCGACACGCGGG 2402692 36 100.0 37 .................................... AAGCCCGGTGAGACAAGTCATATCCTGGTCAGACTCA 2402765 36 100.0 39 .................................... TTGTCGTCTCGGAGCCCGAGCCATTGGGCGACACGCGGG 2402840 36 100.0 38 .................................... GGGAGGGTCTCATCAAGCGTCGTCGGTGCGGAAGTCTC 2402914 36 94.4 41 ..........C....T.................... CTCAGGCGGTAGGCGCGATTCTCTCTCAGATTTTTCCACAG 2402991 36 91.7 36 ..........C....T..............C..... TTTTTACCAGGAGTTTTAGGGGGGGTAAAACTGACA 2403063 36 94.4 37 ..........C....T.................... CAGTTCAAGGTCCAGCGTCTAACCCCTCCATTGGCGT 2403136 36 94.4 38 ..........C....T.................... CCACGCCCCCGCGATAGCATCGTTGAACCAGCGCAAAG 2403210 36 94.4 36 ..........C....T.................... CTCGGAGGCGTACCGGCCCCGGCTGAATCGCATCAT 2403282 36 94.4 36 ..........C....T.................... ATCTCGTGCAGATATTTGACCTCAATGCTGCCGGAA 2403354 36 91.7 39 ..........C....T...T................ TCATTGAGCGACATCACGTCGTGCCCGACGATCGAGTTC 2403429 36 94.4 35 ..........C....T.................... AACAACCAGAGCATCTCAACCTGGGCATCAGTGAG 2403500 36 91.7 37 ..........C....T..........C......... GGAGCGCCGCACGGCCACCGTGACGTGACCGTCGTGG 2403573 36 88.9 38 ..........C.A..T..........C......... AAATCTCGCTCAAAATGGTTCTGGGTACGCAACAAGGC 2403647 36 88.9 37 ..........C.A..T..........C......... AATTCGTGTCTCAAACGCGGCAGCAGATTGGGATCAA 2403720 36 97.2 40 ...............T.................... GGGACGCCGTTTTGTTTCTTTCCAAGAAACATTTTTCCTC 2403796 36 83.3 0 ..........C....TG..T......C.......G. | ========== ====== ====== ====== ==================================== ========================================== ================== 98 36 98.8 37 ATTGTTCCGGTCTTCCAGGCCGGACTTCATTGAGAC # Left flank : GGGAGAACTGGATTCCTACACCCCATTGATGACGAGGTGACCCATGGCCCGACGAAGATATCTCATTTCCTATGACATATCGGATCCCAAGCGGCTGCGAGCCACCTTCAACCTCATGAAGGGCTACGGGAAGTGGCTCCAGTACTCGGTGTTCGTGTGTGACCTGAGCAAGGCTGAACTCGCAATGTGGGAACGGGACATTCGTGATGTGATCGCACTCGCCTACGACTCGGTGGTGGTGATCGACCTCGGCGCCCCGCAAGACGCAGACATCCGTATGCTTGGGGTACCGCGTAGGTTGCCCGATGAGGGGCCCGTGGTGGTGTGAGCCGCTGCGAGACCTCCGGTCATGTCGTCTCCCCTAGGGAGCGCTCGAAGGGGTTTGACTAGGTGTTTTACCCCATGACAACTCAACAGAGTGGTTTTATAGGACCCGGCGGTGCGGAGAGCTCGCAGGTGCTGGTAAAGTTCCTAGCCAAGGCGGCCTTCTGAGGCGAGCC # Right flank : CCATCAGGTCAGGTTCAGTGCTTGTTTCCGCGCCGCGGGCTGTTTCGGCTTTCTGAGGTGGATTCCGTCGATAAGCTGAAGCGAAGCTGTCGTGGCTTCTTGATTACTGTCAAGGTGGGCATTCTTTGGGAGAGCAGTGTCGCCTACCCTTTTGTGCACTAATCGCCGGGGAAACCAGAACGGCGGTCTTGCTCCGTCGGCGGTTTCCCCGGCGATTCTTATGCGAAATATGAAATCTTGTTCGCGGGTGTGGGTGAAAGTGATCCCCCTGATGTTTTTCTACAGGCTGCTCATCGACGGTTGACGCCCTTGGTTAGGCGGGCTTGAGGATGGGCATGAACAAATTTCGTGAAATCTCTCGCGATGGGATCGCGACCTGCTGGCCCTGTTCGTCTTACGCGTGCAGGTGCTCCTTGTGCTTTTCTGCCACCTTTTCCGACTCCAGTTGCAGGGTGCAGTGCTCGATGCGGATTTCGTGATGTTTGATCAGGCACTCCTGG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTTCCGGTCTTCCAGGCCGGACTTCATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //