Array 1 26037-23568 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABEGE010000017.1 Klebsiella variicola isolate k_variicola_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 26036 29 100.0 32 ............................. CAGCGCCTGGGAGGGATTCCGGATCCAGGTTA 25975 29 100.0 32 ............................. TCGACAGCCGTGACCATGATGCGCTGTCGAGA 25914 29 100.0 32 ............................. TTCGATGCTGACCTTAATATTGATTACGGTGA 25853 29 100.0 32 ............................. CATTTCAATAACGCGACAGTGTTCTACTGTTA 25792 29 100.0 32 ............................. AATTGGAGAGGTTTAATGTTCGGGATGCTGAC 25731 29 100.0 32 ............................. TTGGCTTACCCGGGAGATCAGTAACCCGCAGT 25670 29 100.0 32 ............................. GTAGTGAACATCAGAGCCAATGGTGATCTGCA 25609 29 100.0 32 ............................. TCCCGCCTCAACAATCCCCAGCGCATGACCAT 25548 29 100.0 32 ............................. TGTCCTCAATCTCCCACACTCGGCATGCATAT 25487 29 100.0 32 ............................. CGTGGTTTTGAATGGCAAATCGTCTTCTGACG 25426 29 100.0 32 ............................. GCGATAGAAACAGAGGGGTATTTTGGGCGCGG 25365 29 100.0 32 ............................. GGTTCGGCGGCGACGCTAAATCGGCGCAGGCG 25304 29 100.0 32 ............................. TTTTTAAAAAGGCGATAGAAACAGAGGGGTAT 25243 29 100.0 32 ............................. GTATAGAGAACGCCGCACAGCGCATTAACCGT 25182 29 100.0 32 ............................. GTGGTACGCCAGTTGTCCCGCTCCTGCTGCGC 25121 29 100.0 32 ............................. TTCGGCGACGGCTACGAGCAGGTCGCGCCGGA 25060 29 100.0 32 ............................. CATTATCGGGGCCGGTGAAATGCCGCGCCCTC 24999 29 100.0 32 ............................. CCCCATTACGGGAGGTGCTCTTGCCTGATAAC 24938 29 100.0 32 ............................. GTTGAACACTCAGGCGCCCTTGCCGTGAGCTC 24877 29 100.0 32 ............................. GGTTCATCAATCGCTCTCGTTCTGCCCGTTGA 24816 29 100.0 32 ............................. GCGATAGCGAATACTCAACATCGCAATATGAC 24755 29 100.0 32 ............................. CGCTGCCAGTGCAGCGGGACGGGGAAGACACT 24694 29 100.0 32 ............................. ATCGCCGGGGCGCTCAATACCGCCGCACTGGG 24633 29 100.0 32 ............................. CTCGTAGTGGTCAGGAGACAGAGTGATGGCAG 24572 29 100.0 32 ............................. GCGCAGCCGCTGAAAGTATCAGGTACTAAGGC 24511 29 100.0 32 ............................. TAGTAGGGCGGTGAGCCGTCTTGCTGTTCGAA 24450 29 100.0 32 ............................. CTTGAGGGAGTGGATAATTGACTGCACATCCT 24389 29 100.0 32 ............................. GCTCGTTGTTTTCCCGTCGAACGCGCCGGAAA 24328 29 100.0 32 ............................. GACCTCCCATGATTAACGAATATAAAACCGTG 24267 29 100.0 32 ............................. GCGGCACCTGGTCGATAAAAGGTGATGGCGAA 24206 29 100.0 32 ............................. AGCTCCGCATCCGCAGCAGAAACAAATCCAGT 24145 29 100.0 32 ............................. AAATATAATGGGAATTGCCCCGCTCCGGCGGG 24084 29 100.0 32 ............................. CGGGATCGCTGCCACCAAACGGCTGATAATGG 24023 29 100.0 32 ............................. CTCGCCCCAGTCCGGTTTGCTCATCAACTACT 23962 29 100.0 32 ............................. GCGGCAACGCCTCACAGATGCACAAATAAATT 23901 29 100.0 32 ............................. CGAAGACACGCTGGCACAGATTGCCGAGCTAA 23840 29 100.0 32 ............................. CATGTCAGCCCCTCAATGTTATAGCGCTGCTG 23779 29 100.0 32 ............................. TTCAATGCGGCGATAACTTCCTTTAAATCCAC 23718 29 100.0 32 ............................. GGTTGCGACATCGCGCCAGGTATTAATCACGG 23657 29 96.6 32 ............................A TCGACGATGTTCTGCGTGATGGTGATGTATGC 23596 28 82.8 0 ...........AT..-.........G..C | T [23583] ========== ====== ====== ====== ============================= ================================ ================== 41 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGTTCTTGCGGCAGGCGAAATTCAGCCACCCCCACCACCTGAAGACGCACATCCTGTAGCTATCCCACTCCCTGTCTCTTTAGGTGATGCAGGCCATCGGAGTCGTTAACGATGAGTATGTTGGTTGTGGTGACAGAGAATGTTCCTCCGCGACTCCGTGGACGGTTAGCCGTCTGGTTGCTGGAGATTCGCGCTGGTGTGTATGTTGGGGACATCTCAACAAAGACACGAGAAATGATATGGCAACAGGTTTCCGTTCTAGCAGAAGAGGGGAATGTTGTTATGGCTTGGGCGACGAATACCGAATCCGGATTTGAGTTTCAGACATATGGTGTGAATAGACGTATTCCGGTGGATTTGGATGGACTGCGGTTAGTATCTTTCCTTCCTGTTTTAAAACAATGAGTTATATGCTCTTTAATAATGTAAAATTGTTGCTTAATTGTTGGTGAATTGTTTTTCAGTTAAAAGCTATTGATATTGAAGTCTATTTTTTTAGT # Right flank : GCAATTAACAATCAGGCGCCATCTCATAGGCTGTTTGATGGCGCAGGATCAGCACCGCTTGCCACCAGCCCTGCGCCTGAGCTTTTTTGTGTCCTTTTGTCGGCAAAGCATTGGTAAACGCTTGGGCGGCGTCTCTATCCTCAGTTAGCGCAAAATAGGCCAGAGCTTTTGCTACTGGCCCGTGCGCATCAGGCGTCGTGCGAGCAGATTGCGTAGCCTGGCGTCGGCGCTTTCGCGCCCGGCATTTTTCGGCATATTAAGATCAGAAGGAGAAGGTGCCGGGACATATTTATCCACGAAAGCAATGAGCTCATTGACCGTTAGCACCCGTTCGGCAATGTGCGCGACATCCGGCCAGTAATTTTCTTTCGCCTGATACATCAACCACATCGCCTGCAGATAGTCGTCGCGGTTGAGCGCGAGTATCGCCTGCTCGGCGTGAATACGGCAGACCGGCGTCACAAACTCCTCGCTGATAATGTCATCACTAGACTGCTGGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //