Array 1 457670-457101 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007140.1 Thermococcus guaymasensis DSM 11113 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 457669 30 100.0 36 .............................. GAGACCAAGTTCAAGTGGGAGGGAGACTCTGGCTCC 457603 30 100.0 37 .............................. CGACGGCGTGCATGTCCTGCTTGTCAACGCCGTACAC 457536 30 100.0 36 .............................. GAAGCCTCTTCATAGCACCACACCCCCAGCTAGAGC 457470 30 100.0 37 .............................. TCAACATAGAGGGTGACTCCGGTTAGCTCGGCGCTGC 457403 30 100.0 39 .............................. TGCAGTTTTCTTTTTAGCTCTCCGGGCCGTTTCACGGCG 457334 30 100.0 37 .............................. AGAGCCCAGCTAACAATAGAGACAATCAGCTTAATGT 457267 30 100.0 39 .............................. CCTGATGATGCCGACCAGGGCCATCACGAGGAAGAGCAG 457198 30 100.0 38 .............................. GCGGGCGTCGTCTTCCTCTTTTTTTCGCCGCGCATACT 457130 30 93.3 0 ..........................G..C | ========== ====== ====== ====== ============================== ======================================= ================== 9 30 99.3 38 GTTGCAATAAGACTCTAGGAGAATTGAAAG # Left flank : TTGGAAGCTCAGGGAGTTAGGCTTTGACATCATATCACGATGAACACCCCCGGATTTGAGTTTTATGTCCTGTGAGGGCCAGTTTTGTCAATTTCTCCCATCTAAGGCGCCCGGAAATCGATTTTGACCACTTTGAAAGCGTCCCTTATCGTTACGATCCGACTTGAATTTTGTAACGAAAATTTTTCGGAATTTCGAACGGAGCGACCCCACCAGAGTTCCAACCCAAAACCCTGTTCAAATTGAATCTTTTTGAGTTTCAAGCAGTTGGACGTTCAAAATTTTGAATTGGGGCGCTATCTTTTCCCTGGAAATCGCCGACCGGTTCTCGCCCCGGCAGAAAAGGAAGGACAATATTGCCTCGGCGGTGCACAGGGGACTTCTCAAGGCCTGAATTCAGGGTACTTCCTCCTCTTTGCTTTTGCAGAGGTTTCCAGAAAAGCTTAAATATTTGAGTGTTTATAGCCTTCTGTCGGGCGAAGGGGCGGATTTTCCGCCCT # Right flank : TAAGATGGAGCTTGAAATCACAAGAACTCCTCAAACAGCAGGTCTTCGGGCTTTCCGCCGGCTTTTCTAAAAATGCTCACGCTCCAGCCGACGTTCCCGACTTTTTCGGGCCTGTGGGCGTCGCTGGCAAACGTCAGCTTGACGCCCCTCCTTATGCACTCTCTCACGAACTCCAGATCGGGGACGCGGTAGCGTGAGCTTATCTCAAAGGCCTTTCCGTTCTCCTCGGCCAGCTCTATCAGCTCAACGAGGTCTTCCCAAGGTGGGTAGCCGATGTAGGGGAAGCTCGCTCCAAAATGGCCGATTATGTCAACGTTCTCATCAATAAGGGCAGCCTTAACGAGCCCAACGTACTGGTCAGGCCTATCAACCCACTCGTGGACGCTTGCTATCACGAAGTCTAGCTTCTCCGCGGCCCATGCAGGCACGTCCACGCCGTTTGGGGTTATGTTCCCCTCGATCCCAGCTAATATCGTTATCCCACTGTCTTCTCCCCAGCG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATAAGACTCTAGGAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 606075-604299 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007140.1 Thermococcus guaymasensis DSM 11113 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 606074 30 100.0 34 .............................. GCAGAAAAGCCCATCAAAAACTCGATATAATCAC 606010 30 100.0 36 .............................. GAAGATCGGCACTGACGCGGCCACTGACGCTTATCT 605944 30 100.0 36 .............................. AGGAGGACATAGATTACTTTACGACCCTGTTCATTT 605878 30 100.0 36 .............................. ATCGCAAAGGGGACGGAGATATACATCAAGATCGAG 605812 30 100.0 42 .............................. TGAGGAGGGGGAAGGGCCGTGCGGAGGTATTGCGTACCGCGT 605740 30 100.0 37 .............................. CATCCAACCCGCCGACCGTCGAGCCTTATGAGCATAT 605673 30 100.0 39 .............................. GAGGAGAATCAGTGGAAGGTAAAGGATGATACGGCGGGG 605604 30 100.0 36 .............................. AGCTTACATTCCTGCTTTTCTTTTTCCCTGTTTTGG 605538 30 100.0 41 .............................. CCAAGAATATTTATTGGATACTTTATGGAGGGAAGTTAAAG 605467 30 100.0 36 .............................. AAAATCTCTTGGTAATGTGCTATTAGGGTTTTGGAT 605401 30 100.0 37 .............................. AGTCGGGTTGGTGGTGCAATACGCGACGGTGGGGTGA 605334 30 100.0 40 .............................. CCAACCCTCTTTATCGTGATTTTCATCGTCCCGCTTGCAG 605264 30 100.0 37 .............................. TTTTTCCAGAAGGCCCACAAGGACCGCGCTGTGCTTA 605197 30 100.0 36 .............................. GGGGTTTCTACCACGAGCTTGCCACTATGTTTGAGG 605131 30 100.0 36 .............................. TCAAAGACGCGTTAGCTAAAATCCTAAGCGCTGATT 605065 30 100.0 36 .............................. TTGTTATCACCAATCCACATTTACCGCGTTCCAAAC 604999 30 100.0 37 .............................. CGGGGACATTAACCACCCCCACGATTGTGGACAGGGA 604932 30 100.0 37 .............................. CTGAGGTAGTAATCATACTCCAGCCCCTTATCGTCCG 604865 30 100.0 36 .............................. TGGTGGAGCGTGATGGCCGTGGCGATTCGGTGTGCT 604799 30 100.0 42 .............................. TTTACAGAGCGTACTTCAAGCTCTTCGTTGGCGCGGGCATCG 604727 30 100.0 36 .............................. GTCAGTCTCAGTCCCAGACCACGACCCAAGTACAAC 604661 30 100.0 37 .............................. GAGGAACCAGAGCCCGACATGCAAATAATCCCTCCCG 604594 30 100.0 36 .............................. AGCAAGTGTTCGAGTTCTTTGATGACTTTGACACGG 604528 30 96.7 37 ................G............. CTTTTCGTTGTAAACCTTGTAGGCGTAGCCAAGGCCA 604461 30 96.7 38 ................G............. TTAGCTTTGTTTCGGGGGTTAAACAGGAAGTTTGGCTT 604393 30 96.7 35 ................G............. CGTGGGGCTTTGCCAAACGGTAGTTTCTCACGTGC 604328 30 96.7 0 ................G............. | ========== ====== ====== ====== ============================== ========================================== ================== 27 30 99.5 37 GTTGCAATAAGACTCTAGGAGAATTGAAAG # Left flank : AGGAGAACGGAAGGCTCTGAGCCTTTTCTCTTGGTATCACGTTCAGGAACTTTATTTTTCAAAACTTTAGTTTTTGGCCGTAAATTTTGCCAGATGGGGCCTTATTCGGGTTTTGGAAATCGATTTTTGCTCTTTTGATATTGTAACGTTCTGTTATAGTTTGGGCTGATCTTTATAACGAATTTTTTTACGGAAATGTGAATGGGGGAAGCCTGACCCTCTGCTGGTCTTAAACCCTGTTGAAAATGCTGTTTTTCATTATTGTGGAAGATTGGAGAAGAACTACTCAGAATACTCTCGATTTAGAGCTCGATAGACCTCATGTACTTTGATGTTCACTGTGTCCCCCCGGTTTTCTAAGGGGATTGTTTGGCAGTTGGGGCCGCTTGCAGCCCCAATCTAACGGCTCTTCACACAGCTTTTGGGGAGATTTCTAGAAAAGCTTAAATATTCGAGTGCTTATAGCCTTTTGTTGGGGAAACGGGCGGATTTTCCGCCCT # Right flank : ACTACATGACCGCTGACCTCCTCCCCGGGGTAATCTTGGCCTTGCTGGTAATTTTCGGCATAGCGTTGGTCTTGAAGCCGGCGGACCTTAGAAGGCGGATCTAAACCTCAACCCACGTGAAGTCCCTCGCGACCTCTCCAGCGACGCCGCTTTCTCTCACTTTTCTCTCCAGAACCTCGTGGGGGTAGTTGCTGTGGCTGATGTGGGCAAAGACCGTGTAACCAGCGCCAACCCTCTTTGCGAGCTCTATGGCTTCTTTAACCCCGAGGTGCGAGCCGGGGATTGCTTCCCTGTGCGTCATCTCAGCTATGAGGAGGTCTGCTCCTTCCATCAGCTTTATGGTCCTCTCGTCCTTCAGAATCTCCGGCCCGGTATCACCGGTAACTGCTATTCTCTTGCCCTTTGCCTCTACGACGAAGCCTCCCGCCGTTATCGTGTGCACCACAGGAAAGTGCGTGACTTTCATGTCCCCTATTCGGGTCTCTTTCCAGAACTCAAGC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATAAGACTCTAGGAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 3 1798198-1800241 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007140.1 Thermococcus guaymasensis DSM 11113 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 1798198 30 100.0 36 .............................. GAATCACATGTGCGGGAAGTATACATCGTTGGGCAG 1798264 30 100.0 42 .............................. ATCTTGCCGATTACGCGGAATTTGGCGCCGCTCGGGCCCTCA 1798336 30 100.0 37 .............................. CAGCAAGATCGACCAGATGCCTGCTGTTACGGATCAG 1798403 30 100.0 36 .............................. GCAGTGGCGGTGAGGAAGTCGAGCGGGGTGCCGTCG 1798469 30 100.0 37 .............................. TTGCGTCCACCCACGCCGAGCCGTCCCAGACCTTGAC 1798536 30 100.0 38 .............................. TTTCAATGAGTTTACGAAGGCTGTGCAGCAGGAGATGG 1798604 30 100.0 37 .............................. GGAGTAACATCAAGGTGGGATTATGTAATTGTCCGCA 1798671 30 100.0 37 .............................. TCTTTATACCAACGCATGGCTTCCACACTTCAACTTT 1798738 30 100.0 36 .............................. CTTTCACGCGTTCGGGCCGTCAGCGGCTTGCTCTCC 1798804 30 100.0 41 .............................. CTTTCACGCGTTCGGGCCGTCAGCGGCTTGCTCTCCTGCAA 1798875 30 100.0 37 .............................. GTTTTAACCTCGTGGACAACTGACCCTCTCCCCCTAC 1798942 30 100.0 37 .............................. AAATGCCCTCGCTCTGGACGAGGCCCCTTCCTGCAAG 1799009 30 100.0 37 .............................. TCTTCTTCTATGGTTTGCCACGCTTCGACTGCTTCCC 1799076 30 100.0 37 .............................. TGTTTTTTGATGTGTCGTATTATTTTCTCTCCGGCTT 1799143 30 100.0 38 .............................. CAATCTCCTTTTGGGCTTCGCGTAAGGCTTTGATAAAA 1799211 30 100.0 37 .............................. AACGCTGGGCTTCAACTGCGCGGGAGGGGAAGGCAGG 1799278 30 100.0 37 .............................. AAATGGCGTTTACTGTATAATGCTGATTATGGGGCGA 1799345 30 100.0 36 .............................. TAACTAAAGTTTAACCTCTATATAAACTTTTCCTTA 1799411 30 100.0 38 .............................. AAAGCTCCTCGGGGATGAGCCCGACGAACTCACCGCTC 1799479 30 100.0 37 .............................. CGGAGCCGCCGGCGGCTATGGTGCCGAGCTCAAGCGT 1799546 30 100.0 36 .............................. GCATCAGCGGCGGCAGCATCAGCGAGGGCCAGGTCG 1799612 30 100.0 38 .............................. TCATCTTTTCCACCTCCATCCCCTGCCGGGCCAAGCGT 1799680 30 100.0 38 .............................. CGCGGGGTCACGGCGGCTTGACCTCGCAGCGGCGGCAA 1799748 30 100.0 38 .............................. GAGTCACGCGGTACGCAATGCCGCCGTATGGCCCTTCC 1799816 30 100.0 36 .............................. AACATGAGCGTGATGATCGGGTTCTTATGGTAGAAC 1799882 30 100.0 37 .............................. AGGAGTTTGTTTAGGGCTCGGTGTATTGCTTTATATT 1799949 30 100.0 37 .............................. ATTCAGTTTACGTTTATGGGCTCGTTGTGGCATGGGG 1800016 30 100.0 36 .............................. ACGACCTCTTTAAAATGCTGGAGGAGGTGGAAGAAT 1800082 30 100.0 37 .............................. TAGGGTTAGCATGGATATAAATGTCGTGTTTCATGAA 1800149 30 100.0 33 .............................. CGCGAGAGTAGCCCAACCCCCTCACCTCCTCCT 1800212 30 86.7 0 ...............T.G..........TT | ========== ====== ====== ====== ============================== ========================================== ================== 31 30 99.6 37 GTTGCAATAAGACTCGAAGAGAATTGAAAG # Left flank : AGGGTTAGGATGTTCTGGATTTAACCTTTTCTGGCCTATCACGTTAAAAGGGCTTCAATTTCCAAAAAGGGCTGTTTAACGGGAGGAAAATTGAAAATCTTCCCTCGAATACGGCTGGAAATCAATTTTTATTGTTTTAAAATTGTTACTTGTTGTTACATATTTTTGTCATTTTTGTAACGAATTTTCTTCGGAAATTGAAACAGAGCTCGCCAATCACCCGGATAATGCCATAACCTGTGGAAAATGATGTTATTTTGGATTCAACCTCTTTAACCTTCGATTTTGGAGTTTAACGGCATCAAACGGATTTGCATTTCTCAAACCGTTCACCGGTACTGTAGAGACAGCCTCTTAGCCTTCATTTTGGGAGATTTGAAGACGTATAATGACCCCGATTGGAGGGGGTCTGTGCATTCTTTCTTGAGGGTTTCCAGAAAAGCTTAAATATATAAGAACGTACAACTCCCTGTTGGGCGAACGGACGGAAAATCCGCCCT # Right flank : TGAAAGGAATATGGATAAAAACAAGCAGAAACGATGACTTTTATTGGACTAGCTTTTTAGATTTTTCAGTTTTTCAACAATTACATAAAGCTGTGAGCTATCAGAGGCTCGCAACGATATCCATAGTTCTCTCAAAGACCGCTTTGTGGTTTCCAAAGGCCTCAAACATCCTGTCGGAGTACTTGTTTGAGGCCGTTTCAAGGAAAAGGCGCAGGTTGCTGGTTATCTCGTCGTTCATGGGCACGTGGAGGGGCATGGGCTCGTAATAGTCGAGGCCCTTCATCAGAGCCGTTGAGAAGTACCACAGGGTCTTCCGTACCTTCCTTCCCTGTATCCTTGAAAAGCTGGCCTCCATGCAGTTGAATGCGGAATGAAGAACGATGATCATGTCGATCTCCACACCCTGCTTCAGGAGTTTCTTTCTCTTGGAGTCGTTTCTGAGGTCTTTTATCCGATAGCCGCTCCTTGTCTGCTCGTCGTATGGGAGTTCTATGTCGTAG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATAAGACTCGAAGAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA //