Array 1 128920-127626 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEPB010000024.1 Streptococcus gordonii strain MA6 sg_ma6.contig.24_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 128919 32 100.0 34 ................................ CATTTATTTAATACAGGAGAGATTCGTATGACGA 128853 32 100.0 34 ................................ GTTTCGGCTGATACGTACCCAGCCAACTCTTGCT 128787 32 100.0 35 ................................ TCTGTAAAGTCGAACCCAACAGGACAAAGGTAATC 128720 32 100.0 35 ................................ TCGGTCACAATCTGTTGCTATTACGATTCTATCAG 128653 32 100.0 35 ................................ AGGTAAGCCGTCTGATGTTCCGTTTGAGCTAGAAC 128586 32 100.0 34 ................................ TCAAGGTGGTTCTGTTTTTGCAGGTAGTGAAATT 128520 32 100.0 34 ................................ AGAATCAACGTTGTTTCCAACAGCTTCTGTGAAT 128454 32 100.0 34 ................................ TATCATTACCGAAAATGCAATTAGTGGTGGTGAC 128388 32 100.0 34 ................................ ATTAAGGATTCGGAGTTGAAGCGTTTGGGTTTGA 128322 32 100.0 34 ................................ TACCAAAAGGAGACAAGCCTTACTCGATTGAAAA 128256 32 100.0 33 ................................ TTGCTGTCCGCCTTGTCCAGTCCACGGTCGATA 128191 32 100.0 35 ................................ TTAGCATCTACTTTAACGATAGCATGTAGCGACTT 128124 32 100.0 35 ................................ CTGTTTTGTGGCCCGATCCCTCATTGAGAGATACA 128057 32 100.0 35 ................................ TGGATCAACTATGATTGTTTGCGAAGATTTAGGAC 127990 32 100.0 34 ................................ TTCATAATTATTATTGAGGCTTTGCAGATACCAC 127924 32 100.0 34 ................................ TGTATTTACAGGTATAGGCGCCATTGTGTCGAAG 127858 32 100.0 34 ................................ AGGTATTTGGAACGGTATCAGCTCAACTGCATCT 127792 32 100.0 36 ................................ CTTGGCCAAAACCAAGGCGGAGAAGCTGGGCCTAAT 127724 32 100.0 35 ................................ ACCAACTGTTTTTGCTTTTAGAAATCCTTTAAAAC 127657 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 20 32 100.0 34 GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Left flank : CCAAGACAATCCGTGGAGAATTGGAATCCTATCCACCATTTTTGATATAGGAGCTAGTTAATGATGGTATTAGTAACATATGATGTGAATACTGAAACTGCGCAAGGCAGGAAAAGACTACGTCATGTGTCAAAATTATGTGTTGATTATGGGCAACGCGTTCAGAATTCAGTTTTTGAATGCTCAGTAACTCCTGCAGAATTTGTAGAAATAAAAGCTAAGCTTTTGAGTATAATTGACACTGAGTCTGACAGTATTCGTTTTTATTTGCTAGGAAAAAACTGGCAAAATCGCCTAGAAACAATTGGACGTGATACAAGTTATGATCCTGATATAGGCGTACTACTCCTTTAAATTACTTAGTGCGAATAGTGGTTACTCATAAAAAAGTAGGGCATTCGCGCGAAAAACAAACAAAAATAAGGTAAAAATTCAAAAATATAGAGGAGTTATCTCTCCTTGAAAAATAATTTTTACCTAAAACAGTGCAATTACGCGCT # Right flank : TCAATGATTGATCGTGTAACTCGTCTATGCTATAAGGTAGCTTCCTTCATTTTGAAAATTTTCATGAACCCAAGATACTTATTTATTATTTATATAATATATTTAGTTGTTCTCTTTCATATCTATCCAAAAAAAAACCACCTATTAGGTGGTTTTTTTCAGTATCTATCACTGCTTACTAGAAGAACTTGAGCTGCTTGAGCTGTCGCTGCTGGATTCAGAACTGTCTTCTGAGGAGCTGGTGCTTTCAAATTGTTCTGGGTGAAGCGCTCGATAGCTTGGAGCATCAAAGAGATCAATAGTCGATTCGCCCTTGCGTTGGCTATAGAGACTGGTTGATTGGTCTCCTTTTTCTTCCTCGATTTTCTTCAATGCTTTGAAAGAGTGGTTGTAGGAGTATTTCTTGACATCTACCTTGCCCAAGTCATTACCCTTGTAGAAGCGAATCAAGTCACCGGTTTGAATAGCGTCACTAATCTTCAGCTGGGTATTGGCAGCAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //