Array 1 16488-17692 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNTJ01000003.1 Pseudomonas saponiphila strain DSM 9751, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================== ================== 16488 27 92.6 33 A..............C........... CGGACAGGCGCTCAGCCAGTCATTTAGCACTGC 16548 27 92.6 33 ..............G.C.......... CTACGGCGGCGAGGTGAGGCCTTCGCAGGTCTG 16608 27 92.6 33 ..............G.G.......... TGATGAGCGTCGGCAGGTGCTAGGCCGAATTCA 16668 27 92.6 33 ..............G.G.......... TTTCGATACAGGCTAGCTGGCAGCCCTGCGGGC 16728 27 100.0 33 ........................... CTTCCTCAGCTCCATTAGCGTGAACTGGTTATA 16788 27 100.0 33 ........................... CGGTGCATGTCCCCCGCGACAAGCGCAACAACT 16848 27 96.3 33 ....................T...... CCCGAGTCAAACACTCGTGCAGTAACCCATATA 16908 27 92.6 33 ..............G.G.......... CTCGACCTCAACACGCTGTTGCCCGCGTATGTC 16968 27 100.0 34 ........................... CCGCAGGTTGTCAGCAAGCAAATCGCACTTCCAG 17029 27 100.0 33 ........................... CGTGCCGACTTGGCGTGCGTGAGTCGATGCGGC 17089 27 100.0 33 ........................... CTCAGAGCAAGCTGCGCGCGAGCGTGAGGCACA 17149 27 100.0 33 ........................... CCATTTATGCGGGTTTTGGGGCGTATGCTTTGA 17209 27 100.0 33 ........................... CGCGAGCGGGCGGCGGGTGAGCGCTCCTGGTGG 17269 27 100.0 33 ........................... CTCGAACGCATCGAGGTCGCGATGCAGAACTCT 17329 27 100.0 33 ........................... TTGCATATACGTGAAGTGATGCGTGAGATTGAA 17389 27 92.6 33 ..............G.T.......... TGGATGTTTACGCCGACGTGGCGGGGTACGACT 17449 27 96.3 33 ................G.......... TCCTGGCAGCGTACGCGGCAGCGCACCTTCAAT 17509 27 96.3 34 ..............G............ ACCTCAATCGATGCAGTTGGGACCCTATGATCAA 17570 27 88.9 34 ..............GCG.......... CAATCAAGGATATTCGGGTAGACATGATCAACTG 17631 27 100.0 8 ........................... GCCCTCAG Deletion [17666] 17666 27 88.9 0 ..............G.C.......G.. | ========== ====== ====== ====== =========================== ================================== ================== 21 27 96.3 32 CCTTCAAGCCGCCTATACGGCGGCAAA # Left flank : GCCTGGCTGTTTGCCAGCTTGGTCGCCGCTTCCCACAGGGCCGGGCAGTCTTCCGCAGTGCAGCCTACAGAGCTCATTGCTTCGATAGATCGCTGAACCGCCTTCCGGAAGTTCAGGGTGTGATTCAGGGTTTCGAATTTTTCTTTGGCCTCAACGGTCGACGCCAATGGCACGATCACGCTGACGCCGCTGTCGTCGACAACCACGTTCCAGGCTGTCGGGCTGATACCAGTCTGTCGCGTGGTCAGGAAGTCGAGGTGGTCAACCAGGCTGTGTGCTGCTGGCCCATAAATCGAATCGATTGCGGCGTTTCTCATCTTCAAACTCTGCGTTGTGGTGTCGGTAGATTCAGTGTAACGGCGCAATGTGAAGTGTTTTCCTCTGCGTTCTTTGACATCACCGCATGTTCGAACATGGCAATCGTCAATCGCCCACCTTGATTTTCATACCACCTACACGGTGGCGAGTAGGTGAGGATCGAGACGAAGCGCACCCTTGAT # Right flank : ATTAAGCAGATACGTCGGTTGGGTAAACCGCTGGAACCAGATCACCTGACCAGTACGGCACCTGCACCGTCAGTTCAGCTACTGGAACTTTGCGGTGGCCGCTGATCCGGTTCCAAACGTCCAGGGGGAGTGGCCGTGCAGGCGTGCCGTTCGGCATGATCCATGAGCAGTCACGCTCAGCAGGCATCTTTACCCAACTCACATCAAGGATCTCGCCCGCGCCGGCGTTGGCCCTCCGGCCGAGCCCTGGGATGTTGTTTCGTATCATCTCGACGACTCGTTCAGGGTCGCCCTTGCCGAAGAAAACAACAGTCTTTGCGTCAATGCCGGCGTAACTGCTCATGTTTGCTTTGTACGGGCCGCGCTGAGTAGTAACTGCAAGGTAGCGCTTCACCTTGCCGCGTGACTGGGGAGCGAAATGCTCGTCAGTCATGTCGGCCAGGCCCCGCAAGTTCATGATGCGCTGAACAACCGTGTGGCTGTAGCCGCCGGAGACGAAG # Questionable array : NO Score: 2.70 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:-0.10, 8:1, 9:0.74, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTCAAGCCGCCTATACGGCGGCAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.20,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //