Array 1 892240-893645 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026692.1 Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 892240 37 100.0 34 ..................................... ACATTTAACCCGCCAATGCCCTCCTTCCTTCCAA 892311 37 100.0 35 ..................................... AGACCGATGTACACCCCATAGAGATGCAGGGACGT 892383 37 100.0 36 ..................................... TAAGACACTAGCATCAATCGCTTTAACGCTAGCATT 892456 37 100.0 35 ..................................... CGCCATTGACATCGACATAAATTGCAAGATTTCCG 892528 37 100.0 37 ..................................... TAATTTTTTACCCTCTAGCTATCAACTAGAGGCTTTT 892602 37 100.0 35 ..................................... TATTGATAAAGGTAACGTCCATGTATTTCTCTAAG 892674 37 100.0 32 ..................................... GTCTCCCTCCCAATGGGAGGACAGGAATGCAC 892743 37 100.0 37 ..................................... GTTTGAAGTGCAGCAGCGCGAGAATCACTATCCCAAT 892817 37 100.0 37 ..................................... GCCGTGGTCATTTGCAAGCGCAACAGAGGAGCTACTC 892891 37 100.0 31 ..................................... ATCAGCCGTAGGCGCACCCCCCAAGGGTGCG 892959 37 100.0 35 ..................................... ACCTTTGCGCCGTATGCTTTCTTGCTTCCTTGCAC 893031 37 100.0 34 ..................................... CTTTCCTTAAACATTCAATGCATTGTACTGACTT 893102 37 100.0 35 ..................................... GTAACCGTGGGATAGGAAGTAATCGATAGTGACTA 893174 37 100.0 36 ..................................... TGCTCTAGATACAGTCACAGTTACCCCTCCAGTAAC 893247 37 100.0 34 ..................................... CGCTACAGCTGCCATGTAATGATTGGAGTTTAAA 893318 37 100.0 35 ..................................... GGCACGTATAAAGGTGTTTGGGTAGAAGCAGTTGA 893390 37 100.0 36 ..................................... ATTAACTCATTTAAAAGAAGCGGAATTAAATCTAAA 893463 37 100.0 36 ..................................... AATTTCTAATAATTAAGTGAATTTTAACTTATTAAA 893536 37 100.0 36 ..................................... TAGCTCAAACAGCCTTCTAGTAAGGTTTACAACCAC 893609 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 20 37 100.0 35 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : TTCCATTCTCAAGTCTTACGGACAATGGATGCAACTGAGTGTGTTTGAGTGCGATATCACTCCCACTCAGTATGCTAAACTGCGATCGCGTTTAGCTAAATTGATTAAACCCGACACTGACAGCGTGCGTTTTTATTTTCTCTGTGGCTGTTGTCAGCGAAAAGTCGAACGCATTGGCGGAGAACAGCCACGAGACGAAACAATTTTCTTTGCTGAGTCTCCTTCTAGCTAGGTTTCTGCATCTCTAATGCGCGGAAGGGTAGATGTAGAAATTTCACAGCCATAAAAAAGTGCTTCTATCCCAACTCCAGTAATACTTTCAAGCCATTAGTCGCCTAATTCTCATCCGCGCAATCTCTGAAATGCTTATCAAAATACGATTTCAGTCTTGAAATTTTCCTGGCGCTCTTTCCAAACGAATTCTCTAATGCTATGATTGCTCCAGAATCGCGCAACCGCACCTTGAAAACTAAATACAGCTTGACTTTCAGGCTCCCGCT # Right flank : CTACTTGTAGGTGTTCGTTATTTACTGAACACCTGAAGAATTTAATTAAGCTTCAGCAATATCTTTGTTAAGCCATCGCCTAACCGCTCAATAGATTCTTGCTGTTTCGGATTTTTTAACGTGCCATCAACATTAAAGGCTTCATAAGCTTTGGATACTGCTACTTGGTCGGGAAGTACCAAAACTTTGATGTTTCCCAAAATAGATCGCAGGTGAACCAATCCCCGTAAACCACCAAGAGCGCCTGGGGAAGCGCTCATAATGCTAGCAACTTTACCTACAAAAGCAGCCAAAGCCAAAGGTGCTTCATTTGGAGATGGACGAGATGCCCAGTCGATGGCGTTCTTCAAAACTGCTGTGAGTGAACTGTTATATTCCGGCGAAGCAATCAGCAATCCTTGATGAGAAATCATCAAGTCCTTAAACGTGCGGGCGTTGGCAGGTAGTCCTTCTTGAGCTTCCAAATCTTCATCATACAGAGGTAAAGGCAAATCGCGGAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 2 972374-971108 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026692.1 Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 972373 37 100.0 33 ..................................... AAAAGCTGTATCTATAGCTGCATAGTCCATACC 972303 37 100.0 33 ..................................... ATATTTTTCCTACGTTTATATGAAAAAAGCGAT 972233 37 100.0 34 ..................................... GTAGTTTGGCGATATCTGCTTTAGACTGCTCAAC 972162 37 100.0 35 ..................................... GTAGGTGCTGCCCTTCGTGGTAGTTGAATTTTGGT 972090 37 100.0 37 ..................................... AAAAAACCACGGTTCCTTAAGAGGTGTTCGCAATAAA 972016 37 100.0 36 ..................................... AAATATACCATTCCAACCACTGCCATTGTTGAACGA 971943 37 100.0 35 ..................................... AATTGATTTTGAGCTTGTTTACGCCCTTGTATAAA 971871 37 100.0 36 ..................................... AGAAAATTACTTGGTAAAAATGCTGAAAAGGCAGTA 971798 37 100.0 37 ..................................... AGATATTTCTGATTACCCTGCCGTCTTAACGGCTATG 971724 37 100.0 35 ..................................... TTTAAAATCCTTTTACGAAAAGGATGAAGCAGAAC 971652 37 100.0 38 ..................................... AACCTTGATATTTACAATAATGCAAAAAACCACATTAA 971577 37 100.0 37 ..................................... TCGCCTATAACATCCTCCATCCCCGGATACATCGCAT 971503 37 100.0 35 ..................................... AATGGCAGGAATCTATTAAGGAAAAAGCTTTAAAT 971431 37 100.0 33 ..................................... AACTTACAGATTCAGCAGGTAACAAGTCTGACA 971361 37 100.0 35 ..................................... TAGTATCTTAAAAAGTTGTATACTTGCAAAGTAGA 971289 37 100.0 37 ..................................... ATTAAAATCAGTTCCCCCAAACTGTAAATCATTAAAA 971215 37 100.0 34 ..................................... TTTTAATTAACTCTTCAGACTTGTTACCAGTCTG 971144 37 73.0 0 ........................G.AATT..TGTTG | ========== ====== ====== ====== ===================================== ====================================== ================== 18 37 98.5 35 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : TAGCGCGCGGCCCAAAACCTGTTAAACCACCAGCCCCCAAAGTTGAAACAGAAGAACTTGAAACAGAATCAGAATCTATCTCTGAGGAGTCTCAAGACTAACATTACAAGTGTTGTTGTGTGTGATGTGGGAGGCTATAAGCATATAAAGACTGGGATTTCTGGCTCCGAAGGCAGCGATCGCGCCCCCCATCACCATTAGGTTATTTTTAGCGATCGCATCTCTCAGAGAGTTCCTGTATGTCAAATGCGCGAATGGGTAGGTGTACAAATTCCACAGCCACAAAAAAGTGCTTCTATCTCAATACCGGCAAGCATTTCACCCTACTCATCACCCAATTATCATCCGCGCAATCTCTGAAATGCTCACAAAAACTAGGGTGTCAGTCTTTAATCTTTCCCGGCACTCTTCCCAAAGGAATTCTCTAATGCTATGATTGCTCCAGAATCGCGCAACCGCACCTTGAAAACTAAATATAGCTTGGCTTTGCGGCTTCCGCT # Right flank : AGCAAACTAATATTAATGACTTCGCCTTTGACGTGGAAGGCAATCTTTATGGAGCAACGCACATATACAACAGTGTGGTGCGAATTGCAAGCGATCGCAGTAGTACTATTATTGCTCAAGCCGAGGCAGGTGTAATTGATAGCACATCTGTGGCTTTTGGTCAAACTGAGAGCGATCGCTCCACCACAATATATTACTGTTCTTCACCTTTTTCTTGAAGAAGCGATCGCCAATCTTCAATCGCCTTCTCCGTCCACAGCCAATTTTTAGCTAATTTATCTACCTGAAAATTTTCTGGATCGGACTTGAGAACCGTTTGCCGCAACTTGATCGCTTCGTTCAGATACTGTGTTTGCTTGCCATTAGATTGACTAAGTGCAGATTTATACAATCCCAGAGCTAAACCAGCATAAGAAGTTAAAGCATCTTGAGGAACTGCTGTATTTCGAGATGTTGAATTTGTGTTCTGTTCTTTGAGAGCTAAATTCAAAGCCTTGAAC # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 3 1927161-1929063 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026692.1 Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 1927161 37 100.0 36 ..................................... ACTTTCGGAGATTAGAAGGCAGGAATACTACAAGAT 1927234 37 100.0 31 ..................................... AGATTTGATACTTAGTTCACTCTCAAGGAGC 1927302 37 100.0 32 ..................................... GGTGAATTAGAATTGCGCCTTCGGATTTTTAA 1927371 37 100.0 35 ..................................... TGGAAGCTTGGGTTTGGTGGAAGCAGGGGGCAAAG 1927443 37 100.0 37 ..................................... TTTGAGCTTGAATTGGGGACTCCACACGCCGCGTACT 1927517 37 100.0 38 ..................................... TAAAAATAAAAGCTAATGTTGGAGGAGCGATTAAAGAA 1927592 37 100.0 38 ..................................... ACTGGCTGAAAAACTGGCCGCCAATTACCGCGAATTAC 1927667 37 100.0 38 ..................................... GCAAAAAACACCGCAGCCGGGACGCTTGTAACAGGTGA 1927742 37 100.0 35 ..................................... GATAGGGGGCCACCGAAGCATTGATAAACCTCCCT 1927814 37 100.0 35 ..................................... CCAATTTCTTATGCTTACTTTAGCACCAGTTAAGA 1927886 37 100.0 33 ..................................... ACTAATAGTTACTGGCAAACATCAGATAACTGT 1927956 37 100.0 34 ..................................... TTTTATGCTAGGAATTATATTTTGAGAAAAATTA 1928027 37 100.0 32 ..................................... ATGAACCTGTACTTAGAAGCATTGTGTCTCGC 1928096 37 100.0 34 ..................................... TAATAGATTCTTGCAGTTGGCGTGATACTGTGCA 1928167 37 100.0 36 ..................................... AATACCTGGTACCAACTTTAATAAACATGGTAACAA 1928240 37 100.0 34 ..................................... GGTAACAAGTTTATTAAAGGTATAATTTTTCTAA 1928311 37 100.0 35 ..................................... TTGTCTTTGGCGGGGTGCAATCTGCAATTATTGGG 1928383 37 100.0 35 ..................................... CTCTCCGACTATGCTAAAACCACTGGAATGCACGT 1928455 37 100.0 34 ..................................... AGGATCTACATCCTCAGCAATCTTGTTTTCTAAT 1928526 37 100.0 35 ..................................... AGTCAGCTATCAGACGAAATTGATTGCTTAAATGC 1928598 37 100.0 34 ..................................... TTTTTCTGTGGGTTCCTTCAATACGCCTAAGAAT 1928669 37 100.0 35 ..................................... GCTTACTAGAGGGGGCTTTTATTGTAGAAGATTTG 1928741 37 100.0 32 ..................................... GCGTAAGAATGCGGTTTTAGATTTGTCATACA 1928810 37 100.0 33 ..................................... CCTTATGACTACTGCGATCGCTAAAAAAGTAAC 1928880 37 100.0 36 ..................................... AGCTTATCAGTATAGGTTAATGGCTGACGGCGATTA 1928953 37 100.0 37 ..................................... CCTTCAATACGCCTAAGAATGGAATGAAAGCCTCTAA 1929027 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 27 37 100.0 35 ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : AAGATCGTTTTATGTTTTCTCTGTTATTCATAGAATTAACAGACCTCATACGCAACTCTTCTCTGGAAAGAGGAACGAAAGAGGTTCTGATTAAAACAGCTTTTAGAGAATTTGCTTGTGCGATAACAGACTTTGAAGACGTTGCCAAATAAGGTTAGTCATGGAGATGCTGGAATTGCGTAGGCGTAGGCATCACTCTAAAGTCAGCTGACCTAATTGAGTAGAATATCTATAAGTAAACAGCTTTCCGAGCCGATTAGTTTTTTCGCTAAATGCGCGGATGGGTAGGTGTTCAGGAAGGGGGGAATACAAAAATGGCTGAATTGCTGTATATGCAAGGATTTGAGGGCTGTAGCATCTTTAAACCATCCGCGCACCTTATGTAGACTGACTTTCAGCTATTTACATCTAGCACAATTGCCATTCCTTATGTTATGATTTTTGCATTCGCACTATTGAACCTTGAAAACCAAATAACACAAGGCTTTCAGATGCTTGCC # Right flank : CGTAAAATGCTAGGGTGTGAAGGGGCTGCCGTCGGCAGCCCCTTCACACCCCTCATTAAAATGATTATCATTATTTTAATGGCAGAATTTATTTTCTGGAAGTCGCCTATTAAGGATTAAAAATAATTATACTGGGAGTTGTCCTCTAATATTTTAGTATAAATACATACAAACATTACTCAACGGATCATTCCACGTCCTAGCTTGAGGGCTGTGATATTATAGGAGACTGCTGCATACATTTAGAAAAACTAGAAACTGAATCGACCATGGCCCTGACGCAACTGCGGAAACAAGAAATAATTTCCAACTACCAAGTTCACGAAACTGACACTGGCTCGGCCGATGTCCAAGTTGCTATGCTAACTGAGCGCATTAACCGCCTCAGCGAACATCTCCAGGCAAATAAAAAAGACCATTCTTCCCGGCGGGGACTGTTGAAGCTAATTGGCCAGCGCAAGCGTCTTCTAGCTTATATATCGCAAGAAAGCCGGGAAAAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATCAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 4 2391077-2393564 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026692.1 Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 2391077 37 100.0 34 ..................................... AAATGCGATCGCACGTTCACTGGGTAAATCTTTA 2391148 37 100.0 37 ..................................... TTCACATAAATTTAACTGGCACAAGCCGAAACCCGCT 2391222 37 100.0 34 ..................................... AATGACTTGATAGATAACAATGCCCCAATTTTTG 2391293 37 100.0 35 ..................................... AGAAGTGGTTGGTGCTGGTATGGACTATGCAGCTA 2391365 37 100.0 35 ..................................... AACAATCCTTCTCTCGCTGGTAATTTCCGGTTTAG 2391437 37 100.0 35 ..................................... GGATTGGCTACTATGGCATGAGATAGACCTACCAG 2391509 37 100.0 32 ..................................... CAATCATTTGCAGGTTGCAAATCTGCCAGCCT 2391578 37 100.0 35 ..................................... GCCAAATGAACCGCCAGCAGCCGCTAAAGTGGCAT 2391650 37 100.0 34 ..................................... TGAGTACTCAGACATTAAAAAGCATTTTTTCCCT 2391721 37 100.0 33 ..................................... AATTACCTTTGCCTGATTTAACAAACTAGCAGA 2391791 37 100.0 35 ..................................... TAGCTGTATCTGCTGCTCTAGACTTGCATCACGGC 2391863 37 100.0 36 ..................................... TCAGTGCCTTTATGTCTTCAATTGTGTCATCAAAGC 2391936 37 100.0 35 ..................................... CCGGTATCAGTAATGGTAGATGCTGACTTCTTGGC 2392008 37 100.0 37 ..................................... AAATCATCTCTAGACTGGGCATTATAGCGGTCTTTAA 2392082 37 100.0 34 ..................................... AGTAAAAGTCAAGGGGTACGCACAGATTCTTTTT 2392153 37 100.0 39 ..................................... TTACTCAAGCCGAAATTAACGCCACAGTTGCTAAGGAAG 2392229 37 100.0 35 ..................................... TTTTCACCATCCCAGAGAACAGTTACAAAGGGATA 2392301 37 100.0 35 ..................................... TTCCATACAAGAATTTTAATGCATTTAAGAAGAAT 2392373 37 100.0 35 ..................................... AAAAACAAGAAAAATGCCAAGCCTAAATAAAGATT 2392445 37 100.0 33 ..................................... TTTTGGGAACAACTTGTAAAACTGCTTTAGCAA 2392515 37 100.0 35 ..................................... GCCTGCCACCCATCCCCAGCACCAGTAACCTTCCA 2392587 37 100.0 36 ..................................... TATACGGAATCGACTTGTAATGTTGATTACATGAAT 2392660 37 100.0 35 ..................................... AAGGAAATCTACCCTGCCCTGAATGCGGTAAACAT 2392732 37 100.0 33 ..................................... AGCTTTTGACGCTGCCACCGAAAATCCTGCCTT 2392802 37 100.0 36 ..................................... TTAATTGTGGCTGATGATAATGAAAATTATTCCCAA 2392875 37 100.0 35 ..................................... GATACCACCAACCTTAAACAATTTACCCAACGCCT 2392947 37 100.0 35 ..................................... GAATAACCAAAGCACAAGAAACTGTTGCTGCTGCC 2393019 37 100.0 37 ..................................... GCTTTCTCAAAAATTTGCTCTACTACATCATAGTCAA 2393093 37 100.0 34 ..................................... CTTAAAATACAACAGCAAATCTAACTTGCTAGGA 2393164 37 100.0 35 ..................................... CTCGCGTTCGGGGATGCGGCTACCAAATAATCCCC 2393236 37 100.0 37 ..................................... AAAAGCTTATATTGACTTCCTGGAAAATAAGCGTAAC 2393310 37 100.0 34 ..................................... GTATTGGGCAATGCTCCATGCCATTTCTAGTTGG 2393381 37 100.0 37 ..................................... GTTACCAATCAAAATGCCGTAAGACCTCGAAGTGTGC 2393455 37 100.0 36 ..................................... ATTGCTTACTCGACGATCAACCCTTAAAACTCCCGC 2393528 37 97.3 0 ...........C......................... | ========== ====== ====== ====== ===================================== ======================================= ================== 35 37 99.9 35 ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC # Left flank : CAGGACATAGCAGTTCTACTGAACGCATTTTGCAAAATTTACACGAATTGTTAGAGCGATCGCTCGGACACCCTTATACTTTGAAGGTGATTGATGTTTTAAGTCATCCAGAACAAGCAGAACTAAATCAGGTTTCTGCAACCCCTACCCTTGTCAAGGTTTGGCCTCACCCAATTCGGCGAATCGTCGGAGAGTTGGATCATGTAGAAAAGATTTTACAGATGTTAGCTGCTAAGGAAAAATTTTAAGTAATCAGACTAGTTTTTTTGCTAAGTGCGCGAATGGGTAGGTGTTGGTGAAGGAGTAACTACAAAAATGGCTAGATTGCCGTATCTGCAAGGATTTGATAATTTTCGCACTTGAAACCATCCGCGCACCTTATATAAACTGACTTTCAGCTATTTACAATTAGCACAATTGCCAGTCCCTATGTTATGATTTTTGCATCCGCGCTATTGAACCTTGAAAACCAAATAACACAGGGCTTTCAGACGCCTGCG # Right flank : CCTTTAAGTACACGACTTTGGACGGTACTGCTTCAACTCAAAGATAAATCAGCTATATTTAAGTTCATAGGAGAGCATTTGACAAATAACTTGCCACCACGGTCAAATAATTTGTCGCTCTACAATAAATCGGGATGACTGGATTCGAACCAGCGGCCCCTTCGTCCCGAACGAAGTGCGCTACCAAGCTGCGCCACATCCCGCCATAAAAATGGCATTGTAAATTAACAATATCACAACCTGTGCCAAATAGCAGAATTACATCTATATACATACGATCGCTTCATCAAAGACTTTGCTTGCTAGGATTGAGTTTGTATAACTCTAGTGGTAAAAGCGGATTGTGACTGTAAAACCAGACTGGTTGCGGGTGAAAGCACCTGGGCGTGAGCGCATCGGTAACGTTAAAGAAATTTTGCGGGATTTAGCCCTCAATACAGTTTGCGAGGAAGCGTCCTGTCCGAATATTGGTGAATGCTTCAACGCTGGAACTGCCACTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCAATCAAATAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 5 2892742-2892130 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026692.1 Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================== ================== 2892741 35 100.0 38 ................................... TAGGATCAGCGTTTAGCATTTTTTTTAAGGTTTCAAAA 2892668 35 100.0 36 ................................... CAGTACTGAAGCCTAAACCAGCGGTACTTTTTGAGG 2892597 35 100.0 37 ................................... ATTTGATAACTTCCTTCCAGAATGTATAAAACCAGAT 2892525 35 97.1 37 A.................................. TTCAGAATGCGGGACACAAAATCTATGGTCATCTGCT 2892453 35 100.0 37 ................................... AATGTTGGACATGTCTGATTCCTTGGAGTTAATTTCT 2892381 35 100.0 36 ................................... CTTTTCTACCTGTACCTCTGTGTCCGAAAACAAGGG 2892310 35 100.0 37 ................................... CGAGTTGCTAAACAATTATTCTTGTTGAGAACAATTG 2892238 35 100.0 38 ................................... TTACTATTGGATGTGGCATTCTGCCAAAGTCTATTTTC 2892165 35 82.9 0 ..................AA.......G.TA...T | T [2892133] ========== ====== ====== ====== =================================== ====================================== ================== 9 35 97.8 37 CTTTAAACTTCTTCGGAAGTTGAATTAATGGAAAC # Left flank : GTTTCGTGCTTTGGTTGTTGATTCTCTGGTAGTATATCTGGCAAATCGAAACCTGTTTACAATTGACGATTTTACTTACCCAGACGAACGCAATGGTGTGTATTTTCAACCCCATGCACTCAAAAAGTTTCTCAAACATTGGGAGGAAAGGCTACAAACAGAAGTGACGCATCCCCATACAGATCAGAAATTGCCTTACCGTCGGTGTATTGAGTTACAGGTACGTGAATATATTGCTTGTTTAATGGGTGAGGTTGAGGTGTATCGTCCGATGATTTGGGATAAGTAAAACTTAACTGTTTGCTCGTTTCGGGGCTGAAGTCTAAAGCCCCAAACCCTGATTCTTTCGTTGACAGCCCCGGCAAGCTTATCAATTAAGGGTTCGGGGCTTTTTCTCGGAGGGTTAATTCTCAATTGAGGGTATTGATTTTGGATAAATTTGACAAGCCCCGAAAATCTGCTGTAGGATGACCTCTGGGTAAGGCTTTCAGTAGCCAGCC # Right flank : TACAGACCCCCGATTTGTTTGAGAAATCGGGGGTTTTGTTTTTTAAGCGAACATTATTTAGTATGGCTATATTCCCAGATTTTTAATTGTCTAACTTATATACAAACTTATATACAAACTTATATCCAAACTCCCTTTGTTATATATCAGGTTATATATCTATCTGAGAATATGTAATTAAGTAAGAAGTGCAACGAACAAAAAAAAGAACAGCCTTTTCTGTTTGAACTTTTTACCTTTAACCTTTTACTTAATTTCAACTATGTCCACAATTTATATCACCGAACAGGATGCAACCCTCCAAGTGCAACACCATTATTTAAAGGTGTTCCATCAACAAAAACAATGTATCAGTCTTCGGATTAATAACGTCAGCCAAATCATTCTCTTTGGTAACATCAGATTGTCAAAAGAAGTACTTCAGGTTGTAGTAGCTCATCAAATCCCAGTGCTTTATTTAACTGCAAATGGCAAATTCATCGGGAGATTAGAAAACACAG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAAACTTCTTCGGAAGTTGAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 6 3876227-3877119 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026692.1 Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 3876227 37 100.0 33 ..................................... AACTACACTTATAGCGATCGCATATACGATTAT 3876297 37 100.0 31 ..................................... AGCGAATTTCTGCTAGTTCATTATCTTAATC 3876365 37 100.0 34 ..................................... TATCACCTATATATGCGTGTCTCTCACTGTAATC 3876436 37 100.0 35 ..................................... GGCGACATGACAACCCCACAGCTAAATTCCCTAGT 3876508 37 100.0 33 ..................................... AGAAGATACCGAATCAAAGCAGTTGCTGACAGC 3876578 37 100.0 35 ..................................... TGGCAAAAGAAAGATTCACCTAGATCCTTTTGAAA 3876650 37 100.0 36 ..................................... AATAGGCAAGAATAGCAATGGTGACACTTTTGAATT 3876723 37 100.0 35 ..................................... AGCAGAAGCCAATCTCAATAGACTGGAATTTAACA 3876795 37 100.0 36 ..................................... GCCGCCAGCTTCTACGCTACCATGTGGCAGCAAAAC 3876868 37 100.0 34 ..................................... GCCAATAAAGATGTTTTTTATAAAGGTGTTGATT 3876939 37 100.0 34 ..................................... CCCAGAGAAAAGGGTATGCCCTGCGTAGTTAGGA 3877010 37 100.0 36 ..................................... TAAATCTTTTATCTTCAAAAGAGAACAGGTTTACAA 3877083 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 13 37 100.0 34 ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : TCCTAATATGCCAGGAGCAGTACCTTGGACATCAACTCAGGCACTTAATAATAGTACATTACCTTATGTTGTCCAGTTGGCGAATTTGGGAATTTTGGCACTGGAAGTTAACCCAGCATTAGCTAAAGGTGTGAATGTGCAGAATCATCGCTTAGTGCATCCTGCTGTACAAGAAGTATTCCCTGATTTGGTAAATTAAGGTGTGCAAGGATTAGGCGATCGCTTATTTTAATGTTGGTAGCGATCGCCAATCAGACTAATTTTCTTGCCTTATGCGCGGATGGGTAGGTGTACAAAATGAGAAGGAGCGAAAAAGGCTGTACGCTCAATCTATACAAGACTTTCAAGGCAACGGTACTTTCAAACCATCCGCGCACCTTATGGGGACGGGTTTTCAGCGATTTGCATCTTGTGATATCACTATTCCCTGTGTTATGATTCGTTCATTTGCGCAACTGAACCTTGAAAACCAAATACAGCAGCGCTTTCAGAAGCCAGCG # Right flank : CATTAAGATTGTAAGTGTAACAATTGTTGTTGCACCAATTGTAATTAACCTTTAAAATCTAAAATCCAAAATTGTTTAACTAAAGCGATCGCCTTTTCAACCCAACAATTCGTCTACAGCTACACTAAAACCCAGTAATACTTTTGAAAAGCTAACCACATCACCAGCTTTAAACCCGCAAACCTGATTATCAGTGATGACAAAAACTAATTGACTTTCAGGAAATACTAGCCAAACTTCCTCACAACCGGACTGTAAATACTCCTGCGCTTTGAGAAATAATTCTTCAGCTAAATCGGTGGGTGAAACTATCTCAGCAATCAACGGGAAACTCTGTGGCAAAGTGGGAACATCACCAAACTCAGTTACCAACTCAGGCGTTAGATAAGCTACATCAGGACGACGACCCTGTTTATATGTACGACAAGGTACTTCAGTATAAACTTTCCCACCTTGTTGATTGGAGTTAATGTAACTTCTCCAGTAAAACCAATATTTAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 7 6260679-6261008 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026692.1 Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 6260679 37 100.0 36 ..................................... GACTTTGTAAAATCTAAATCCATCTGATTAGCCGAA 6260752 37 100.0 41 ..................................... ATATTGATTGGGTGCGATCGCTCGTAGTTGAGTGCTTTGAT 6260830 37 97.3 35 ........................C............ TTTTGGGTTGGTAGGCTATCAAAAATTGCCGTAAA 6260902 37 97.3 33 ..................C.................. CGCTCAAATCTCGTAGGGGATGAGCGGCTATTG 6260972 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 5 37 98.9 36 GTGGCAACAACCCTCCAGGTACTGGGTGGGTTGAAAG # Left flank : AACTGTATTTTTTAATACGCTTTGTGAAAACTCGTTAAGAGCTATTACATAAGTAAAATTAATCAATATTTTGGTTGATTTCCGGGGCTTATTTATAAGTGAATCTTATTATTCATGCCTCACAATCACCTTTTGGACAATTCTCCAAAAACGGTATCATACACTACTATTTTTTAGCGATCGCAGAAGTTTTCGGTCTACTGATTGTAAATAAAGTTTTTTAACTTAAGTTAAAATTGAGTCTATAGTCAACTATTCACTCTGGGATGATTCTGTCTCGCCAGAGTGAATAGTTGACTAGCCTCAAATGTTGCGACATTAATTTGTGAACGGTTATCTAGAAGAAGTAACGACACTAATTTGTGAAATAGCGACATTCAATTTGTGAATGCACAACAAGTGTACAGTGACTAATTATTTGTCACGACGACAAATAATTAGTCACTGTACATGGGTGGGTTGAAAGAGTAGGTGTCATGCTACAACTTCACATGAGTCTT # Right flank : GCCAAATCTGAAACTATTACGCACGCAAAAATGTTGTAATAACCCGCCAGGTACTAACTAGGTGGGTTATCATAATTTTTATAGGGAGGGTTGAAAGAGAGCGCTACGTTGACATTATCGCTATAGTCTCTGAAAATAAATGACATTAATCTGTCACTGGCACTTAAACGACATCAATTTGTCCCGACGACAGATAATTAGTCTCAACGACATTAATCTGTCACCGATGACAAATAATTAGTCACTGTACAACAAGAATGGACGTAACTGGATTCGAACCAGTGACCTCTACGATGTCAACGTAGCGCTCTAACCAACTGAGCTATACGTCCTTAACCACACAATTACCGATAGTAGCATATACTTCTCTGATAAGGCAAGATAAAAGACAAAATCAGGCGAACTCTATCACTCCCTAAGTAATCAAGCGCAGATGATGTGAAGTATTTGTTTGATTTGTAAAGGAGCTTGCACCACTTGCTACAAATCAAACAAATAAG # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCAACAACCCTCCAGGTACTGGGTGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.70,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //