Array 1 17160-16466 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAAIRQ010000033.1 [Ruminococcus] gnavus strain MSK.15.9 NODE_33_length_39199_cov_210.962, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
     17159	    32	 100.0	    33	................................	CCTGATCCAGACCGATGAGGATCACCTGTCCAT   	
     17094	    32	 100.0	    35	................................	CAAAGGAGTACGATACCCTGCAGTATTCAAACAGT 	
     17027	    32	 100.0	    34	................................	TATGTGTTAATATAGAAAATGCAAGGAGGAAGCA  	
     16961	    32	 100.0	    34	................................	CGGAAGATTTTGTTACGGTGTAAGTAGCGACTTT  	
     16895	    32	 100.0	    33	................................	TACAACTGAAACAACTATAAAAAAACTTACAGA   	
     16830	    32	 100.0	    36	................................	CCGTAATGCATCTACTGAAACTCCACAGGCATTGCA	
     16762	    32	 100.0	    36	................................	ACAAATTTAATTCGCTCGGATGTGGTGTCTACTTCA	
     16694	    32	 100.0	    34	................................	CGTACAAACGGCAGGATTCGACCATCCTCCAGCT  	
     16628	    32	 100.0	    34	................................	GCGATATCATCTGCCATGCTACTGCCGCCGGAAT  	
     16562	    32	 100.0	    33	................................	CAGGCGGGACTTTCGGATAATTGGATCCATTAA   	
     16497	    31	  90.6	     0	........................-.G.T...	|                                   	T [16468]
==========	======	======	======	================================	====================================	==================
        11	    32	  99.1	    34	GTCACTCCCTTCGCGGGAGTGTGGATTGAAAT	                                    	       

# Left flank :   ATCCGGTATTTCTCTGGAAATGAGGCGAAAATGGGATGTTAGTGTTGATTACATATGATGTGAACACAGAAACAGCGGCTGGAAAGAGGAGATTGCGCCAAGTGGCAAAACAGTGTGTAAATTATGGGAGAAGAGTGCAAAATTCTGTATTCGAATGTATCTTAGATAATGCACAGTGTGTTATGCTTAAGGCAAAACTGACAGATATCATCGATGAAGAAGTTGATAGTTTGAGATTTTATTACTTGGGAAATCAATATAAAACAAAAGTCGAACATGTTGGTGTAGACAGAGGAATTTCGGCGGATGGAATTCTTATTATGTAACTGGGGTGCGGATGATAAGCAAACATAAAAATGCTGGGAGATTCGCACCAAAAAAATGCACAAAAATTAGTTGAAGAGGTGAAAGTTAGAGAAATATGATGAGGAAAAGAGAATGATATTGGTAGAATTGAGTAATATTAAAGAATATAAAGCCTAAAATTAGGCAAAATTGCT
# Right flank :  GTGGTGGACGGGCTGCCGGAAGATGCCGATGATTTCCGGTATCCGGGAGATGCGATCGAACCGGAAATACAATCGGAGTTGGAACGTGCATTAAGCGGGGAAACGGTATTGCCGGAGAAGATTCTGGATACAGACTGGGGAAATATTTTTATTGCTTATTATCCGTTGTATAATGAATCAGGAGAAGTCATCGGTGCACTTGGAATAGAAGTTGCGGCAGATATAGAAGCCGAGGCGGTACATGACAAATCCATTATACAGAGACATGGCAAATACTGATTTTATGACAGAACTAAAGAACAGAAATTCTTATGAGACAGACCGGCAGAACCTGGATGCAAAGAAGAAATGGAATGGCCTGACAGTGGCAGTGATCGATGTGAACAATCTGAAGCTGGTAAATGATCGGCTGGGGCATGCTGTGGGTGATGATTGTATTGTGAATGCAGCACGGGTCCTGCAGAGTGTTGAATCTCAAAAAGTTACGGCGTATCGATACG

# Questionable array : NO	 Score: 9.21
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCACTCCCTTCGCGGGAGTGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     F [9,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 93% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-5.80,-5.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [4-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [40.0-75.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.74,9.68   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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