Array 1 1063394-1064291 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP013216.1 Streptococcus salivarius strain HSISS4 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence       	Spacer_Sequence                                       	Insertion/Deletion
==========	======	======	======	======================	======================================================	==================
   1063394	    22	  95.5	    49	..............T.......	CATAGTTTTATATCGAGAAAAGCAATGACTTAAAAACAGAAAGCCTTGT     	
   1063465	    22	  86.4	    52	...A.........CT.......	TATAGGTTTATATCATGCTAGGATTGAAATTTCTGGGGCGTTGCGCCAACAG  	
   1063539	    22	  81.8	    49	...A.........CT......G	GATAGGGTTATATCGAAAGAACAACAATGGAAGACAAAAAAATAATACT     	
   1063610	    22	  90.9	    48	...C.........C........	CATAGGTTTATATCAAGAACCAACAAGCTTTGGTTATCGTCACCCACT      	
   1063680	    22	  81.8	    50	...A.........CT......G	AATAGGTTTACATCTGAACAAAAAGATACTGGAGAGGAAAAATGTAATGA    	
   1063752	    22	  90.9	    54	.............C......C.	GATAGGTTTATATCCCCAAGTTGCAGGAAAAATCACAGTGACACCAATTCAGCA	
   1063828	    22	  86.4	    50	.............CT......T	ATAGGTTTATATCAAAAAACGGTTAGAACAGTAAAAGCACATGTGAAAAA    	
   1063900	    22	  86.4	    52	.............CT.....A.	CATAAGTTTATATCAATCGTTACCATCTTCAATCCGTAGCCTCGGCTCGCCG  	
   1063974	    22	 100.0	    52	......................	TATAGGTTTATATCAAACTGTAAGATCGCTGGAGCTATCTAGTTTGATGGGA  	
   1064048	    22	  86.4	    54	A............CC.......	AATAGGTTTATATCTTGAAGGTGGTATCCCTGGCATTCCAGAAGTACGTGAGTT	
   1064124	    22	 100.0	    52	......................	GATAAGTTTATATCTAAATGCTAGAAAAATACACTAAAGTTTGGTTGACTGA  	
   1064198	    22	  86.4	    50	....T........CT.......	TATAGGGTTATATCCGAACCATCTAAACCAGAAGAACCAGAACCATCTAA    	
   1064270	    22	  90.9	     0	.............CT.......	|                                                     	
==========	======	======	======	======================	======================================================	==================
        13	    22	  89.5	    51	GTTTCCGTCCCCTTGCGAGGTA	                                                      	       

# Left flank :   ACTCCTGAATCTCAACTTTTTCGACACTGAGTTTAGGTAAGTCGTTTAAGGATACCTCTTTAATCTGTAATAAGGTCATAAAAGCCTTTGCCTCGAGGTCATCTGTAAGCAGATGCACAACCCACTGCGTGTTTTCTTTCCCTTGGATTATCTTGGTTGCATAGGGATTTGTTTGCTGCTGATGCAGATAATCAACATAGTCACTATCCAACTGCTCCATCAAGAAGCCATGAAATTTAACAGCCAAATCTTGTGCAGGATGGTCGATCCTTTTAAAAGTAAATACTAATTTTTTCATTCGACTCCTTCATCTTTGTATGAAAAAACCCCAAAAGCTGAAAGTACTTTTCACCTCATTGGGGCGCCCTTAATGTGCTTTTAGTCTAACACTTTCTGGAAGCGGTGTCAAGACTATTTTCAAAATTTTCAAAAAAGTCCCCTCTCGAGGTATATAGGTTGATATCCAAGCATATTATGTATTATCTGCTCCAGCGTATATA
# Right flank :  AAATAGGTTTATATCCCCATATCTTGTGCTCTAGACAGTTGCTAGAGACACAAGATATAGGACCTACTGGAAACACTATCTATATTGTACCATATGTTTGCAGGCCTATAAAGGCTTAGAAGAAGAGAATGTCATCTATTTTTTCAGCACTATGGTAGGGGCTAAAACTAGTCACCTCTTCTTTGGTTGTCACATATACGATTATGCTGTCTTCTTCATCAGCCTTGTAGAAGCTCTCGATATCCTTAAGGAGAGACTGATAGTCATTTCTTGACAGGTCGACCTCGAAACAGGATTTTTGCACCCTCACGCCATAACCCTCAAGTAATTTGGAGAGTTTAAGTCTACGTTTGTTACTTCGGATATCATAAATAATCAGACAAAACATGGTTTTTTGTTTGGCAAACTCACGTTCTTCTTCGCTGAGATTAAAGTAAAGTCCCATTAATGCCCTCCTGTGTAACTTGTCTCATAAAGACTAGGGTCGAGTTCTCTAAAAG

# Questionable array : NO	 Score: 4.15
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.47, 5:0, 6:-0.25, 7:-0.33, 8:1, 9:0.26,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTCCGTCCCCTTGCGAGGTA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [10-11] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0.37   Confidence: LOW] 

# Array family : NA
//