Array 1 2067-130 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSVX01000016.1 Ligilactobacillus salivarius strain FCQHC3_L6_2 Scaffold16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================= ================== 2066 36 100.0 30 .................................... TTTTTAACGATATTACCGCCGGAATAGCTC 2000 36 100.0 30 .................................... GTTATTTAGAAGTATACAACTAAAAAGTAG 1934 36 100.0 30 .................................... CGTACTAATGAACATTTTGTACCGCCTTAA 1868 36 100.0 30 .................................... TCTTTCAAGCAAATGAAACCCTACTTGATG 1802 36 100.0 30 .................................... AAGAAACCTTTTAGGCTAGGGGTTTTCGGG 1736 36 100.0 30 .................................... AATTACTAAAGTTAGTAGCTGCGAATAATG 1670 36 100.0 30 .................................... TTAATTTTAAGTGATCCGCCATGTATTGCA 1604 36 100.0 30 .................................... TAGTGGTAATAAAACAATTAAGATTAGTCT 1538 36 100.0 30 .................................... AAGAAACCTTTTAGGCTAGGGGTTTTCGGG 1472 36 100.0 30 .................................... TGATTTTTTGAATAGTCCCTTTTCTAGCTT 1406 36 100.0 31 .................................... TGATTTTTTTGAATAGTCCCTTTTCTAGCTT 1339 36 100.0 30 .................................... AAGAAACCTTTTAGGCTAGGGGTTTTCGGA 1273 36 97.2 30 ............................C....... AGGTGGCTTAGCGCTAGTTAATGATAGTGT 1207 36 100.0 30 .................................... CCCCACAAGGCTCAAGCAGTGGACCAACTG 1141 36 100.0 30 .................................... TAGCCGGTGTAGTATCTACGGTAGGGCGTG 1075 36 100.0 30 .................................... TAGCCGGGCAGTATAAACAAGCATTTTTCC 1009 36 100.0 30 .................................... CAATCATAGATTTTATAAAAACATTGTTAA 943 36 100.0 30 .................................... ATATTTTTACTTGAGTTGCGAAGGGTTGCA 877 36 100.0 30 .................................... TAGACTTTTGATAACCATTCTCGACCATGA 811 36 100.0 30 .................................... AGGTGGCTTAGCGCTAGTTAATGATGGTGT 745 36 100.0 30 .................................... TGCTTTTTCATGGTTTTGGTTCGTTCACGC 679 36 100.0 30 .................................... TATCACAGAAAGTTCTCCAGCAACATTATT 613 36 100.0 30 .................................... CGATAAGATTGCAGAAATTACTAACTTGAT 547 36 100.0 30 .................................... GAACCATTTACTTCATACGTGATGTTGGCG 481 36 100.0 30 .................................... TATCTAATGTATTTTATGGATCACGTCAAA 415 36 100.0 30 .................................... AAGTTCACACGAAAAGCCCTATGACAATAC 349 36 86.1 81 ..........T.........T...A......G.C.. ATCTGCGTTCAGTTGGTGTCTCAATGCTCGTTTCAGAAGTATGTTAAAAACCTATTATATGTTATAATATGAAAGTGTTTA T [315] 231 36 83.3 30 .....G....T.........T.........G.T..T AGTAATTCACCGCTAGTTAAGTGGTTTTTT 165 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================= ================== 29 36 98.2 32 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACG # Right flank : CTAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGAGTAAACACACTATAGTGTGACATTACAGATAAAAAGGCCC # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [19-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //